MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 90735 bp
Accession: NZ_CP027138 Location: 1..90735 Organism: Escherichia coli strain AR_0369 Replicon: plasmid unnamed2
Accession: NZ_CP027138 Location: 1..90735 Organism: Escherichia coli strain AR_0369 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC06_RS01285 () | 1..319 | + | 319 | Protein_0 | hypothetical protein | - |
| CSC06_RS01290 () | 564..1275 | + | 712 | Protein_1 | type IV secretion system protein | - |
| CSC06_RS01295 () | 1280..2205 | + | 926 | Protein_2 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| CSC06_RS01300 () | 2202..3405 | + | 1204 | Protein_3 | TrbI/VirB10 family protein | - |
| CSC06_RS01305 () | 3407..4438 | + | 1032 | WP_001058476.1 | Type IV secretion system protein VirB11 | VF |
| CSC06_RS01310 () | 4441..6276 | + | 1836 | WP_050871576.1 | type IV secretory system conjugative DNA transfer family protein | - |
| CSC06_RS01315 () | 6273..6686 | + | 414 | WP_001579347.1 | hypothetical protein | - |
| CSC06_RS01320 () | 6683..6985 | + | 303 | WP_001576896.1 | hypothetical protein | - |
| CSC06_RS01325 () | 6991..7248 | + | 258 | WP_001547185.1 | hypothetical protein | - |
| CSC06_RS26535 () | 7330..7764 | + | 435 | WP_001579348.1 | hypothetical protein | - |
| CSC06_RS01335 () | 7761..8297 | + | 537 | WP_001576898.1 | thermonuclease family protein | - |
| CSC06_RS01340 () | 8313..8717 | + | 405 | WP_001576899.1 | hypothetical protein | - |
| CSC06_RS01345 () | 8777..9097 | + | 321 | WP_001020837.1 | hypothetical protein | - |
| CSC06_RS01350 () | 9124..9711 | + | 588 | WP_024185732.1 | hypothetical protein | - |
| CSC06_RS01355 () | 9736..10311 | + | 576 | WP_001576901.1 | hypothetical protein | - |
| CSC06_RS01360 () | 10316..12469 | + | 2154 | WP_050871577.1 | type IA DNA topoisomerase | - |
| CSC06_RS01365 () | 12466..12672 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| CSC06_RS01370 () | 12688..13149 | + | 462 | WP_001293131.1 | H-NS histone family protein | - |
| CSC06_RS01375 () | 13200..13463 | + | 264 | WP_000072657.1 | hypothetical protein | - |
| CSC06_RS01385 () | 14432..14611 | + | 180 | WP_000347021.1 | hypothetical protein | - |
| CSC06_RS01390 () | 14691..15512 | - | 822 | WP_001576903.1 | hypothetical protein | - |
| CSC06_RS01395 () | 15762..16286 | - | 525 | WP_001576904.1 | hypothetical protein | - |
| CSC06_RS01400 () | 16455..18077 | - | 1623 | Protein_22 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| CSC06_RS01405 () | 18225..19085 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| CSC06_RS01410 () | 19376..20080 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CSC06_RS01415 () | 20120..23011 | + | 2892 | WP_108696083.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| CSC06_RS01420 () | 23061..23758 | + | 698 | Protein_26 | IS1 family transposase | - |
| CSC06_RS01430 () | 24128..24766 | - | 639 | WP_001576905.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CSC06_RS01435 () | 25147..25809 | + | 663 | WP_050871575.1 | peptidyl-arginine deiminase | - |
| CSC06_RS01440 () | 25909..26190 | + | 282 | WP_001185482.1 | hypothetical protein | - |
| CSC06_RS01445 () | 26215..27192 | + | 978 | WP_001579336.1 | hypothetical protein | - |
| CSC06_RS01450 () | 27189..27614 | - | 426 | WP_015058974.1 | TaxD | - |
| CSC06_RS01455 () | 27682..28128 | - | 447 | WP_001074386.1 | hypothetical protein | - |
| CSC06_RS01460 () | 28153..29007 | - | 855 | WP_001239324.1 | replication initiation protein | - |
| CSC06_RS01470 () | 30069..30320 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| CSC06_RS01475 () | 30310..30591 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CSC06_RS01480 () | 30737..31060 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| CSC06_RS01485 () | 31105..31350 | + | 246 | WP_000356546.1 | hypothetical protein | - |
| CSC06_RS01490 () | 31340..31555 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| CSC06_RS01495 () | 31648..31977 | + | 330 | WP_000866648.1 | hypothetical protein | - |
| CSC06_RS01500 () | 32020..32199 | + | 180 | WP_000439078.1 | hypothetical protein | - |
| CSC06_RS26350 () | 32269..32418 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| CSC06_RS01510 () | 32431..32703 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| CSC06_RS26540 () | 32960..33034 | + | 75 | Protein_43 | DNA distortion polypeptide 3 | - |
| CSC06_RS01520 () | 33029..33574 | + | 546 | WP_105394090.1 | DNA distortion polypeptide 1 | - |
| CSC06_RS01525 () | 33577..34743 | + | 1167 | WP_105394073.1 | hypothetical protein | Relaxase |
| CSC06_RS01530 () | 35095..35613 | + | 519 | WP_105394074.1 | transcription termination factor NusG | - |
| CSC06_RS01535 () | 35543..35755 | + | 213 | WP_000125172.1 | hypothetical protein | - |
| CSC06_RS01540 () | 35788..36434 | + | 647 | Protein_48 | Type IV secretion system protein virB1 | VF |
| CSC06_RS01545 () | 36412..36708 | + | 297 | WP_032180636.1 | TrbC/VirB2 family protein | - |
| CSC06_RS01550 () | 36727..39480 | + | 2754 | WP_105394075.1 | Type IV secretion system protein virB4 | VF |
| CSC06_RS01555 () | 39491..40240 | + | 750 | WP_001722384.1 | type IV secretion system s family protein | - |
| CSC06_RS01560 () | 40255..40539 | + | 285 | WP_001722385.1 | EexN family lipoprotein | - |
| CSC06_RS01565 () | 40551..41612 | + | 1062 | WP_105394076.1 | hypothetical protein | VF |
| CSC06_RS01570 () | 41858..42570 | + | 713 | Protein_54 | type IV secretion system protein | - |
| CSC06_RS01575 () | 42575..43504 | + | 930 | WP_001722388.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| CSC06_RS01580 () | 43501..44706 | + | 1206 | WP_105394077.1 | Type IV secretion system protein virB10 | VF |
| CSC06_RS01585 () | 44708..45739 | + | 1032 | WP_085457059.1 | Type IV secretion system protein VirB11 | VF |
| CSC06_RS01590 () | 45742..47577 | + | 1836 | WP_123907331.1 | type IV secretory system conjugative DNA transfer family protein | - |
| CSC06_RS01595 () | 47574..47987 | + | 414 | WP_105394079.1 | conjugal transfer protein | - |
| CSC06_RS01600 () | 47984..48286 | + | 303 | WP_000717626.1 | IncN plasmid KikA protein | - |
| CSC06_RS01605 () | 48292..48549 | + | 258 | WP_000726017.1 | hypothetical protein | - |
| CSC06_RS26545 () | 48663..48980 | + | 318 | WP_000623494.1 | hypothetical protein | - |
| CSC06_RS01615 () | 48977..49465 | + | 489 | WP_000779029.1 | thermonuclease family protein | - |
| CSC06_RS01620 () | 49476..49817 | + | 342 | WP_105394080.1 | hypothetical protein | - |
| CSC06_RS01625 () | 49938..51200 | + | 1263 | WP_000517352.1 | AAA family ATPase | - |
| CSC06_RS01630 () | 51204..51779 | + | 576 | WP_105394081.1 | DNA topoisomerase III | - |
| CSC06_RS01635 () | 51784..53937 | + | 2154 | WP_105394082.1 | type IA DNA topoisomerase | - |
| CSC06_RS01640 () | 53934..54140 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| CSC06_RS01645 () | 54156..54617 | + | 462 | WP_001293131.1 | H-NS histone family protein | - |
| CSC06_RS01650 () | 54668..54931 | + | 264 | WP_000072657.1 | hypothetical protein | - |
| CSC06_RS01655 () | 55107..56432 | - | 1326 | WP_105394083.1 | hypothetical protein | - |
| CSC06_RS01660 () | 56483..57274 | - | 792 | WP_105394084.1 | hypothetical protein | - |
| CSC06_RS26355 () | 57444..57680 | - | 237 | WP_000887751.1 | hypothetical protein | - |
| CSC06_RS01670 () | 58164..58343 | + | 180 | WP_000347021.1 | hypothetical protein | - |
| CSC06_RS01675 () | 58423..59244 | - | 822 | WP_001576903.1 | hypothetical protein | - |
| CSC06_RS01680 () | 59494..60018 | - | 525 | WP_001576904.1 | hypothetical protein | - |
| CSC06_RS01685 () | 60187..61809 | - | 1623 | Protein_77 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| CSC06_RS01690 () | 61957..62817 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| CSC06_RS01695 () | 63108..63812 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CSC06_RS01700 () | 63908..64417 | + | 510 | WP_000571065.1 | Dihydrofolate reductase | ARG |
| CSC06_RS01705 () | 64414..65070 | + | 657 | WP_000144779.1 | metallophosphoesterase | - |
| CSC06_RS01710 () | 65107..65811 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CSC06_RS01715 () | 65884..66123 | + | 240 | WP_011264039.1 | macrolide transporter | - |
| CSC06_RS01720 () | 66269..67132 | + | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| CSC06_RS01725 () | 67170..67415 | + | 246 | WP_001354008.1 | GrpB family protein | - |
| CSC06_RS01730 () | 67884..68675 | + | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| CSC06_RS26360 () | 68678..68953 | - | 276 | WP_109023896.1 | hypothetical protein | - |
| CSC06_RS01735 () | 68955..69590 | + | 636 | Protein_88 | IS256 family transposase IS406 | Transposase |
| CSC06_RS01745 () | 69855..70187 | - | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| CSC06_RS01750 () | 70357..71145 | - | 789 | WP_001206315.1 | Streptomycin 3''-adenylyltransferase | ARG |
| CSC06_RS01755 () | 71203..71727 | - | 525 | WP_000704156.1 | streptothricin N-acetyltransferase Sat2 | - |
| CSC06_RS01760 () | 71818..72660 | - | 843 | WP_016242844.1 | alpha/beta fold putative hydrolase EstX | - |
| CSC06_RS01765 () | 73002..73538 | + | 537 | WP_000071896.1 | Tyrosine recombinase XerH | VF |
| CSC06_RS01770 () | 73653..73979 | + | 327 | WP_000497519.1 | Tyrosine recombinase XerD | VF |
| CSC06_RS01775 () | 74167..74406 | - | 240 | WP_001353740.1 | DUF1819 family protein | - |
| CSC06_RS01780 () | 75311..75952 | - | 642 | WP_005826111.1 | Chloramphenicol acetyltransferase 3 | ARG |
| CSC06_RS01790 () | 76846..77097 | - | 252 | Protein_98 | hypothetical protein | - |
| CSC06_RS01795 () | 77156..77932 | - | 777 | WP_105394085.1 | hypothetical protein | - |
| CSC06_RS01800 () | 78077..78526 | + | 450 | WP_105394086.1 | hypothetical protein | - |
| CSC06_RS01805 () | 78652..78906 | - | 255 | WP_105394087.1 | hypothetical protein | - |
| CSC06_RS01815 () | 79758..79841 | + | 84 | WP_000565612.1 | hypothetical protein | - |
| CSC06_RS01820 () | 79996..80640 | - | 645 | WP_105394088.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CSC06_RS01825 () | 80935..81555 | + | 621 | WP_000864788.1 | ParA family protein | - |
| CSC06_RS01830 () | 81607..81837 | + | 231 | WP_000051066.1 | partitioning protein | - |
| CSC06_RS01840 () | 82261..83325 | + | 1065 | WP_012291478.1 | AAA family ATPase | - |
| CSC06_RS01850 () | 83863..84285 | - | 423 | WP_206354214.1 | DNA distortion polypeptide 3 | - |
| CSC06_RS01855 () | 84353..84799 | - | 447 | WP_001074382.1 | hypothetical protein | - |
| CSC06_RS01860 () | 84839..85675 | - | 837 | WP_001802123.1 | replication initiation protein | - |
| CSC06_RS01865 () | 86908..87159 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| CSC06_RS01870 () | 87149..87430 | + | 282 | WP_000220562.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CSC06_RS01875 () | 87576..87899 | + | 324 | WP_001181905.1 | hypothetical protein | - |
| CSC06_RS01880 () | 87947..88198 | + | 252 | WP_105394089.1 | hypothetical protein | - |
| CSC06_RS01885 () | 88188..88403 | + | 216 | WP_001180117.1 | hypothetical protein | - |
| CSC06_RS01890 () | 88496..88825 | + | 330 | WP_000866654.1 | hypothetical protein | - |
| CSC06_RS01895 () | 88868..89047 | + | 180 | WP_000439079.1 | hypothetical protein | - |
| CSC06_RS26365 () | 89117..89266 | + | 150 | WP_000003879.1 | hypothetical protein | - |
| CSC06_RS01905 () | 89279..89551 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| CSC06_RS26550 () | 89808..89882 | + | 75 | Protein_119 | DNA distortion polypeptide 3 | - |
| CSC06_RS01915 () | 89877..90421 | + | 545 | Protein_120 | DNA distortion polypeptide 1 | - |
| CSC06_RS01920 () | 90424..90735 | + | 312 | Protein_121 | spore coat protein CotH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|