MGE detailed information
MGE type: Prophage MGE length: 55498 bp
Accession: NZ_CP026964 Location: 1480742..1536239 Organism: Staphylococcus aureus strain FDAARGOS_2 Replicon: chromosome
Accession: NZ_CP026964 Location: 1480742..1536239 Organism: Staphylococcus aureus strain FDAARGOS_2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK61_RS07470 () | 1475955..1476089 | + | 135 | WP_001823225.1 | delta-lysin family phenol-soluble modulin | - |
| RK61_RS07475 () | 1476688..1477473 | - | 786 | WP_000867941.1 | carbon-nitrogen family hydrolase | - |
| RK61_RS07480 () | 1477834..1478460 | - | 627 | WP_000522384.1 | nitroreductase family protein | - |
| RK61_RS07485 () | 1478657..1479799 | + | 1143 | WP_000120309.1 | hypothetical protein | - |
| RK61_RS07490 () | 1479824..1480567 | - | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| RK61_RS07495 () | 1480742..1481026 | + | 285 | WP_000917289.1 | co-chaperone GroES | - |
| RK61_RS07500 () | 1481102..1482718 | + | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| RK61_RS07505 () | 1482813..1483359 | - | 547 | Protein_1392 | site-specific integrase | - |
| RK61_RS07510 () | 1483420..1483632 | + | 213 | WP_000128898.1 | hypothetical protein | - |
| RK61_RS07515 () | 1483629..1484219 | + | 591 | WP_001293059.1 | terminase small subunit | - |
| RK61_RS07520 () | 1484536..1484973 | + | 438 | WP_072419900.1 | hypothetical protein | - |
| RK61_RS07525 () | 1485079..1485522 | + | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| RK61_RS07535 () | 1486376..1487683 | - | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| RK61_RS07540 () | 1487844..1488755 | + | 912 | WP_000825510.1 | Iron(3+)-hydroxamate-binding protein FhuD | VF |
| RK61_RS07545 () | 1488817..1489662 | + | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| RK61_RS07550 () | 1490034..1491257 | - | 1224 | WP_000206623.1 | ArgE/DapE family deacylase | - |
| RK61_RS07555 () | 1491693..1492745 | + | 1053 | WP_000791417.1 | putative leukocidin-like protein 2 | VF |
| RK61_RS07560 () | 1492767..1493783 | + | 1017 | WP_000595401.1 | putative leukocidin-like protein 1 | VF |
| RK61_RS07565 () | 1494021..1494851 | - | 831 | Protein_1403 | Phospholipase C | VF |
| RK61_RS07570 () | 1494902..1495939 | - | 1038 | WP_000857182.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| RK61_RS07575 () | 1496023..1496751 | - | 729 | WP_000733771.1 | Enterotoxin type A | VF |
| RK61_RS07580 () | 1496775..1497503 | - | 729 | WP_001033320.1 | Enterotoxin type A | VF |
| RK61_RS07585 () | 1497699..1498469 | - | 771 | WP_001208482.1 | helix-turn-helix domain-containing protein | - |
| RK61_RS07590 () | 1498628..1498852 | + | 225 | WP_000338186.1 | DUF739 family protein | - |
| RK61_RS07595 () | 1498870..1499130 | + | 261 | WP_000435341.1 | transcriptional regulator | - |
| RK61_RS07600 () | 1499154..1499693 | - | 540 | WP_000351243.1 | hypothetical protein | - |
| RK61_RS07605 () | 1499750..1500495 | + | 746 | Protein_1411 | phage antirepressor KilAC domain-containing protein | - |
| RK61_RS07610 () | 1500511..1500708 | + | 198 | WP_001148861.1 | hypothetical protein | - |
| RK61_RS07615 () | 1500739..1500879 | + | 141 | WP_000939496.1 | hypothetical protein | - |
| RK61_RS07620 () | 1500894..1501526 | - | 633 | WP_000275058.1 | hypothetical protein | - |
| RK61_RS07625 () | 1501585..1501905 | + | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| RK61_RS07630 () | 1501902..1502063 | + | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| RK61_RS07635 () | 1502156..1502416 | + | 261 | WP_000291488.1 | hypothetical protein ; Integrase | Integrase |
| RK61_RS07640 () | 1502425..1502688 | + | 264 | WP_001205732.1 | hypothetical protein | - |
| RK61_RS07645 () | 1502685..1504640 | + | 1956 | WP_047211354.1 | AAA family ATPase | - |
| RK61_RS07650 () | 1504642..1505562 | + | 921 | WP_000138475.1 | recombinase RecT | - |
| RK61_RS07655 () | 1505643..1506260 | + | 618 | WP_072353921.1 | MBL fold metallo-hydrolase | - |
| RK61_RS07660 () | 1506261..1506731 | + | 471 | WP_000934765.1 | single-stranded DNA-binding protein | - |
| RK61_RS07665 () | 1506761..1507654 | + | 894 | WP_000148328.1 | DnaD domain-containing protein | - |
| RK61_RS07670 () | 1507661..1507879 | + | 219 | WP_000338527.1 | hypothetical protein | - |
| RK61_RS07675 () | 1507888..1508292 | + | 405 | WP_000401978.1 | RusA family crossover junction endodeoxyribonuclease | - |
| RK61_RS07680 () | 1508305..1508556 | + | 252 | Protein_1426 | hypothetical protein | - |
| RK61_RS07685 () | 1508541..1508636 | + | 96 | Protein_1427 | DUF1381 domain-containing protein | - |
| RK61_RS07690 () | 1508633..1508782 | + | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| RK61_RS07695 () | 1508941..1509591 | + | 651 | WP_001005262.1 | hypothetical protein | - |
| RK61_RS07700 () | 1509591..1509791 | + | 201 | WP_001570807.1 | DUF1514 family protein | - |
| RK61_RS07710 () | 1509814..1510284 | + | 471 | WP_000282755.1 | hypothetical protein | - |
| RK61_RS07715 () | 1510399..1510851 | + | 453 | WP_000406191.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| RK61_RS07720 () | 1510867..1511211 | + | 345 | WP_000817289.1 | HNH endonuclease | - |
| RK61_RS07725 () | 1511340..1511807 | + | 468 | WP_000919026.1 | phage terminase small subunit P27 family | - |
| RK61_RS07730 () | 1511810..1513504 | + | 1695 | WP_000133304.1 | phage terminase large subunit | - |
| RK61_RS07735 () | 1513518..1513718 | + | 201 | WP_000365299.1 | hypothetical protein | - |
| RK61_RS07740 () | 1513724..1514974 | + | 1251 | WP_000511067.1 | phage portal protein | - |
| RK61_RS07745 () | 1514967..1515551 | + | 585 | WP_000032525.1 | HK97 family phage prohead protease | - |
| RK61_RS07750 () | 1515639..1516886 | + | 1248 | WP_000849950.1 | phage major capsid protein | - |
| RK61_RS07755 () | 1516922..1517080 | + | 159 | WP_001252099.1 | hypothetical protein | - |
| RK61_RS07760 () | 1517089..1517421 | + | 333 | WP_001177483.1 | head-tail connector protein | - |
| RK61_RS07765 () | 1517408..1517743 | + | 336 | WP_000975314.1 | head-tail adaptor protein | - |
| RK61_RS07770 () | 1517743..1518120 | + | 378 | WP_000501244.1 | HK97 gp10 family phage protein | - |
| RK61_RS07775 () | 1518117..1518497 | + | 381 | WP_000611454.1 | hypothetical protein | - |
| RK61_RS07780 () | 1518498..1519451 | + | 954 | WP_000570652.1 | Ig-like domain-containing protein | - |
| RK61_RS07785 () | 1519516..1519962 | + | 447 | WP_000442601.1 | hypothetical protein | - |
| RK61_RS07790 () | 1520022..1520144 | + | 123 | WP_000570353.1 | hypothetical protein | - |
| RK61_RS07795 () | 1520200..1524849 | + | 4650 | WP_001133533.1 | phage tail tape measure protein | - |
| RK61_RS07800 () | 1524849..1526339 | + | 1491 | WP_001154317.1 | phage tail family protein | - |
| RK61_RS07805 () | 1526355..1530137 | + | 3783 | WP_000582130.1 | hypothetical protein | - |
| RK61_RS07810 () | 1530130..1530282 | + | 153 | WP_001000058.1 | hypothetical protein | - |
| RK61_RS07815 () | 1530328..1530615 | + | 288 | WP_001262621.1 | hypothetical protein | - |
| RK61_RS07820 () | 1530671..1531045 | + | 375 | WP_000340977.1 | hypothetical protein | - |
| RK61_RS07825 () | 1531418..1532191 | + | 774 | WP_000750412.1 | Enterotoxin type A | VF |
| RK61_RS07830 () | 1532300..1532476 | + | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| - () | 1532464..1532638 | - | 175 | - | - | Antitoxin Detail |
| RK61_RS07840 () | 1532688..1532942 | + | 255 | WP_000611512.1 | phage holin | - |
| RK61_RS07845 () | 1532954..1533709 | + | 756 | WP_000861025.1 | CHAP domain-containing protein | - |
| RK61_RS07850 () | 1533900..1534391 | + | 492 | WP_000920038.1 | Staphylokinase | VF |
| RK61_RS07870 () | 1535042..1535377 | + | 336 | Protein_1460 | SH3 domain-containing protein | - |
| RK61_RS07875 () | 1535889..1536239 | + | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| RK61_RS07880 () | 1536292..1536552 | - | 261 | WP_001791826.1 | hypothetical protein | - |
| RK61_RS07890 () | 1536863..1537042 | - | 180 | WP_000669791.1 | hypothetical protein | - |
| RK61_RS07895 () | 1537364..1537614 | - | 251 | Protein_1464 | sphingomyelin phosphodiesterase | - |
| RK61_RS07900 () | 1538000..1539748 | + | 1749 | WP_001792928.1 | extracellular adherence protein Eap/Map | - |
| RK61_RS07905 () | 1539735..1540049 | + | 315 | Protein_1466 | MAP domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus MW2 | Prophage | TA10154 | NC_003923 | 2047408..2102909 | 0 |