MGE detailed information
MGE type: Prophage MGE length: 67623 bp
Accession: NZ_CP026958 Location: 271927..339549 Organism: Staphylococcus aureus strain FDAARGOS_40 Replicon: chromosome
Accession: NZ_CP026958 Location: 271927..339549 Organism: Staphylococcus aureus strain FDAARGOS_40 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK98_RS01525 () | 268433..268723 | - | 291 | WP_000671712.1 | MAP domain-containing protein | - |
| RK98_RS01530 () | 268738..270168 | - | 1431 | WP_001557458.1 | extracellular adherence protein Eap/Map | - |
| RK98_RS01540 () | 271125..271304 | + | 180 | WP_000669791.1 | hypothetical protein | - |
| RK98_RS01550 () | 271615..271875 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| RK98_RS01555 () | 271927..272277 | - | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| RK98_RS01560 () | 272788..273123 | - | 336 | Protein_261 | SH3 domain-containing protein | - |
| RK98_RS01580 () | 273774..274265 | - | 492 | WP_000920038.1 | Staphylokinase | VF |
| RK98_RS01585 () | 274480..275211 | - | 732 | WP_000861035.1 | CHAP domain-containing protein | - |
| RK98_RS01590 () | 275223..275477 | - | 255 | WP_000611512.1 | phage holin | - |
| RK98_RS01595 () | 275529..275636 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - () | 275558..275697 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 275558..275697 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 275558..275697 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 275558..275697 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| RK98_RS01600 () | 275689..275865 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| RK98_RS01605 () | 275974..276747 | - | 774 | WP_000750412.1 | Enterotoxin type A | VF |
| RK98_RS01610 () | 277120..277494 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| RK98_RS01615 () | 277550..277837 | - | 288 | WP_001262621.1 | hypothetical protein | - |
| RK98_RS01620 () | 277883..278035 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| RK98_RS01625 () | 278028..281810 | - | 3783 | WP_000582139.1 | hypothetical protein | - |
| RK98_RS01630 () | 281826..283310 | - | 1485 | WP_000567408.1 | phage tail family protein | - |
| RK98_RS01635 () | 283307..287836 | - | 4530 | WP_001795393.1 | phage tail tape measure protein | - |
| RK98_RS15215 () | 287893..288030 | - | 138 | WP_001549167.1 | hypothetical protein | - |
| RK98_RS01640 () | 288081..288431 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| RK98_RS01645 () | 288481..288705 | - | 225 | WP_072050172.1 | Ig-like domain-containing protein | - |
| RK98_RS01650 () | 288747..289391 | - | 645 | WP_000268741.1 | phage tail protein | - |
| RK98_RS01655 () | 289392..289799 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| RK98_RS01660 () | 289796..290200 | - | 405 | WP_000114227.1 | HK97 gp10 family phage protein | - |
| RK98_RS01665 () | 290197..290559 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| RK98_RS01670 () | 290543..290827 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| RK98_RS01675 () | 290817..291101 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| RK98_RS01680 () | 291121..292266 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| RK98_RS01685 () | 292290..293027 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| RK98_RS01690 () | 293011..294198 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| RK98_RS01695 () | 294214..295875 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| RK98_RS01700 () | 295872..296216 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| RK98_RS01705 () | 296346..296645 | - | 300 | WP_000988330.1 | HNH endonuclease | - |
| RK98_RS01710 () | 296877..297293 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| RK98_RS01715 () | 297321..297521 | - | 201 | WP_000265043.1 | DUF1514 family protein | - |
| RK98_RS15140 () | 297521..297672 | - | 152 | Protein_291 | transcriptional regulator | - |
| RK98_RS01720 () | 297669..297875 | - | 207 | WP_000195778.1 | DUF1381 domain-containing protein | - |
| RK98_RS01725 () | 297892..298065 | - | 174 | WP_001209219.1 | hypothetical protein | - |
| RK98_RS01730 () | 298102..298635 | - | 534 | WP_000181819.1 | dUTP pyrophosphatase | - |
| RK98_RS01735 () | 298628..298870 | - | 243 | WP_000700108.1 | hypothetical protein | - |
| RK98_RS01740 () | 298860..299096 | - | 237 | WP_001065101.1 | DUF1024 family protein | - |
| RK98_RS01745 () | 299089..299460 | - | 372 | WP_001793991.1 | hypothetical protein | - |
| RK98_RS01750 () | 299469..299711 | - | 243 | WP_000131382.1 | hypothetical protein | - |
| RK98_RS01755 () | 299715..300083 | - | 369 | WP_000101288.1 | hypothetical protein | - |
| RK98_RS01760 () | 300096..300500 | - | 405 | WP_000401977.1 | RusA family crossover junction endodeoxyribonuclease | - |
| RK98_RS01765 () | 300509..300727 | - | 219 | WP_000338530.1 | hypothetical protein | - |
| RK98_RS01770 () | 300734..301627 | - | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| RK98_RS01775 () | 301657..302127 | - | 471 | WP_000934760.1 | single-stranded DNA-binding protein | - |
| RK98_RS01780 () | 302128..302745 | - | 618 | WP_071621397.1 | MBL fold metallo-hydrolase | - |
| RK98_RS01785 () | 302826..303746 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| RK98_RS01790 () | 303748..305691 | - | 1944 | WP_000700557.1 | AAA family ATPase | - |
| RK98_RS01795 () | 305700..305963 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| RK98_RS01800 () | 305972..306232 | - | 261 | WP_000291483.1 | DUF1108 family protein | - |
| RK98_RS01805 () | 306237..306539 | - | 303 | WP_000165366.1 | DUF2482 family protein | - |
| RK98_RS01810 () | 306629..306790 | - | 162 | WP_000066023.1 | DUF1270 family protein | - |
| RK98_RS01815 () | 306787..307107 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| RK98_RS01820 () | 307162..307794 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| RK98_RS01825 () | 307809..307949 | - | 141 | WP_000939496.1 | hypothetical protein | - |
| RK98_RS01830 () | 307980..308177 | - | 198 | WP_001148861.1 | hypothetical protein | - |
| RK98_RS01835 () | 308193..308948 | - | 756 | WP_001148341.1 | phage antirepressor KilAC domain-containing protein | - |
| RK98_RS01840 () | 309005..309544 | + | 540 | WP_000351243.1 | hypothetical protein | - |
| RK98_RS01845 () | 309568..309828 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| RK98_RS01850 () | 309842..310084 | - | 243 | WP_000639927.1 | DUF739 family protein | - |
| RK98_RS01855 () | 310248..310964 | + | 717 | WP_001083967.1 | LexA family transcriptional regulator | - |
| RK98_RS01860 () | 310976..311833 | + | 858 | WP_000804507.1 | HIRAN domain-containing protein | - |
| RK98_RS01865 () | 311878..312060 | + | 183 | WP_000705248.1 | hypothetical protein | - |
| RK98_RS01870 () | 312160..312624 | + | 465 | WP_000825947.1 | hypothetical protein | - |
| RK98_RS01875 () | 312683..313720 | + | 1038 | WP_000857191.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| RK98_RS01880 () | 313771..314601 | + | 831 | Protein_324 | Phospholipase C | VF |
| RK98_RS01885 () | 314839..315855 | - | 1017 | WP_000595392.1 | putative leukocidin-like protein 1 | VF |
| RK98_RS01890 () | 315877..316932 | - | 1056 | WP_000791413.1 | putative leukocidin-like protein 2 | VF |
| RK98_RS01895 () | 317368..318570 | + | 1203 | WP_000206624.1 | ArgE/DapE family deacylase | - |
| RK98_RS01900 () | 318878..320185 | + | 1308 | WP_001045082.1 | TrkH family potassium uptake protein | - |
| RK98_RS01910 () | 321202..321924 | + | 723 | WP_000746599.1 | Enterotoxin type A | VF |
| RK98_RS01915 () | 322093..322893 | - | 801 | WP_000278088.1 | Enterotoxin type C-3 | VF |
| RK98_RS01920 () | 323680..324240 | + | 561 | WP_001035616.1 | DUF4888 domain-containing protein | - |
| RK98_RS15220 () | 324389..324696 | - | 308 | Protein_332 | pathogenicity island protein | - |
| RK98_RS01925 () | 325119..325823 | + | 705 | WP_001035599.1 | Toxic shock syndrome toxin-1 | VF |
| RK98_RS01930 () | 325978..326547 | - | 570 | WP_001293088.1 | terminase small subunit | - |
| RK98_RS01935 () | 326544..326885 | - | 342 | WP_000358774.1 | hypothetical protein | - |
| RK98_RS01940 () | 326888..327415 | - | 528 | WP_000771368.1 | spore coat protein | - |
| RK98_RS01945 () | 327466..327684 | - | 219 | WP_000448770.1 | capsid morphogenesis B protein | - |
| RK98_RS01950 () | 327702..328280 | - | 579 | WP_000846280.1 | hypothetical protein | - |
| RK98_RS01955 () | 328292..328633 | - | 342 | WP_001190615.1 | hypothetical protein | - |
| RK98_RS01960 () | 329083..329724 | - | 642 | WP_001019810.1 | hypothetical protein | - |
| RK98_RS01965 () | 329721..330005 | - | 285 | WP_000998179.1 | hypothetical protein | - |
| RK98_RS01970 () | 330007..330369 | - | 363 | WP_001039169.1 | hypothetical protein | - |
| RK98_RS01980 () | 330655..332124 | - | 1470 | WP_001668899.1 | virulence-associated E family protein | - |
| RK98_RS01985 () | 332141..333010 | - | 870 | WP_001002695.1 | primase alpha helix C-terminal domain-containing protein | - |
| RK98_RS01990 () | 333077..333394 | - | 318 | WP_001103933.1 | DUF1474 family protein | Toxin Detail |
| RK98_RS01995 () | 333397..333606 | - | 210 | WP_001058487.1 | hypothetical protein | Antitoxin Detail |
| RK98_RS02000 () | 333599..333745 | - | 147 | WP_000784893.1 | hypothetical protein | - |
| RK98_RS02005 () | 333742..333969 | - | 228 | WP_000164237.1 | helix-turn-helix domain-containing protein | - |
| RK98_RS02010 () | 334005..334211 | - | 207 | WP_001060953.1 | hypothetical protein | - |
| RK98_RS02015 () | 334369..335016 | + | 648 | WP_072474260.1 | helix-turn-helix domain-containing protein | - |
| RK98_RS02020 () | 335022..336128 | + | 1107 | WP_000121223.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| RK98_RS02030 () | 336691..337155 | - | 465 | WP_001085183.1 | SsrA-binding protein SmpB | - |
| RK98_RS02035 () | 337177..339549 | - | 2373 | WP_001050048.1 | ribonuclease R | - |
| RK98_RS02040 () | 339583..340323 | - | 741 | WP_001165959.1 | carboxylesterase | - |
| RK98_RS02045 () | 340439..340672 | - | 234 | WP_000556760.1 | preprotein translocase subunit SecG | - |
| RK98_RS02050 () | 340739..341197 | - | 459 | WP_000785252.1 | hypothetical protein | - |
| RK98_RS02055 () | 341536..342840 | - | 1305 | WP_001121760.1 | phosphopyruvate hydratase | - |
| RK98_RS02060 () | 342970..344487 | - | 1518 | WP_001085507.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|