MGE detailed information
MGE type: Prophage MGE length: 41342 bp
Accession: NZ_CP026957 Location: 45585..86926 Organism: Staphylococcus aureus strain FDAARGOS_43 Replicon: chromosome
Accession: NZ_CP026957 Location: 45585..86926 Organism: Staphylococcus aureus strain FDAARGOS_43 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RL01_RS00220 () | 40717..41940 | - | 1224 | WP_000206623.1 | ArgE/DapE family deacylase | - |
| RL01_RS00225 () | 42376..43428 | + | 1053 | WP_000791417.1 | bi-component leukocidin LukGH subunit H | - |
| RL01_RS00230 () | 43450..44466 | + | 1017 | WP_000595401.1 | bi-component leukocidin LukGH subunit G | - |
| RL01_RS00235 () | 44704..45534 | - | 831 | Protein_45 | sphingomyelin phosphodiesterase | - |
| RL01_RS00240 () | 45585..46622 | - | 1038 | WP_000857194.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| RL01_RS00245 () | 46706..47434 | - | 729 | WP_000733771.1 | Enterotoxin type A | VF |
| RL01_RS00250 () | 47458..48186 | - | 729 | WP_001033320.1 | Enterotoxin type A | VF |
| RL01_RS00255 () | 48382..49152 | - | 771 | WP_001208482.1 | helix-turn-helix domain-containing protein | - |
| RL01_RS00260 () | 49311..49535 | + | 225 | WP_000338186.1 | DUF739 family protein | - |
| RL01_RS00265 () | 49553..49813 | + | 261 | WP_000435341.1 | transcriptional regulator | - |
| RL01_RS00270 () | 49837..50376 | - | 540 | WP_000351243.1 | hypothetical protein | - |
| RL01_RS00275 () | 50433..51182 | + | 750 | WP_001148337.1 | phage antirepressor KilAC domain-containing protein | - |
| RL01_RS00280 () | 51198..51395 | + | 198 | WP_001148861.1 | hypothetical protein | - |
| RL01_RS00285 () | 51426..51566 | + | 141 | WP_000939496.1 | hypothetical protein | - |
| RL01_RS00290 () | 51581..52213 | - | 633 | WP_000275058.1 | hypothetical protein | - |
| RL01_RS00295 () | 52272..52592 | + | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| RL01_RS00300 () | 52589..52750 | + | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| RL01_RS00305 () | 52843..53103 | + | 261 | WP_000291488.1 | hypothetical protein ; Integrase | Integrase |
| RL01_RS00310 () | 53112..53375 | + | 264 | WP_001205732.1 | hypothetical protein | - |
| RL01_RS00315 () | 53372..55327 | + | 1956 | WP_047211354.1 | AAA family ATPase | - |
| RL01_RS00320 () | 55329..56249 | + | 921 | WP_000138475.1 | recombinase RecT | - |
| RL01_RS00325 () | 56330..56947 | + | 618 | WP_072353921.1 | MBL fold metallo-hydrolase | - |
| RL01_RS00330 () | 56948..57418 | + | 471 | WP_000934765.1 | single-stranded DNA-binding protein | - |
| RL01_RS00335 () | 57448..58341 | + | 894 | WP_000148328.1 | DnaD domain-containing protein | - |
| RL01_RS00340 () | 58348..58566 | + | 219 | WP_000338527.1 | hypothetical protein | - |
| RL01_RS00345 () | 58575..58979 | + | 405 | WP_000401978.1 | RusA family crossover junction endodeoxyribonuclease | - |
| RL01_RS00350 () | 58992..59243 | + | 252 | Protein_68 | hypothetical protein | - |
| RL01_RS00355 () | 59228..59323 | + | 96 | Protein_69 | DUF1381 domain-containing protein | - |
| RL01_RS00360 () | 59320..59469 | + | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| RL01_RS00365 () | 59628..60278 | + | 651 | WP_001005262.1 | hypothetical protein | - |
| RL01_RS00370 () | 60278..60478 | + | 201 | WP_001570807.1 | DUF1514 family protein | - |
| RL01_RS00380 () | 60501..60971 | + | 471 | WP_000282755.1 | hypothetical protein | - |
| RL01_RS00385 () | 61086..61538 | + | 453 | WP_000406191.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| RL01_RS00390 () | 61554..61898 | + | 345 | WP_000817289.1 | HNH endonuclease | - |
| RL01_RS00395 () | 62027..62494 | + | 468 | WP_000919026.1 | phage terminase small subunit P27 family | - |
| RL01_RS00400 () | 62497..64191 | + | 1695 | WP_000133304.1 | phage terminase large subunit | - |
| RL01_RS00405 () | 64205..64405 | + | 201 | WP_000365299.1 | hypothetical protein | - |
| RL01_RS00410 () | 64411..65661 | + | 1251 | WP_000511065.1 | phage portal protein | - |
| RL01_RS00415 () | 65654..66238 | + | 585 | WP_000032525.1 | HK97 family phage prohead protease | - |
| RL01_RS00420 () | 66326..67573 | + | 1248 | WP_000849950.1 | phage major capsid protein | - |
| RL01_RS00425 () | 67609..67767 | + | 159 | WP_001252099.1 | hypothetical protein | - |
| RL01_RS00430 () | 67776..68108 | + | 333 | WP_001177483.1 | head-tail connector protein | - |
| RL01_RS00435 () | 68095..68430 | + | 336 | WP_000975314.1 | head-tail adaptor protein | - |
| RL01_RS00440 () | 68430..68807 | + | 378 | WP_000501244.1 | HK97 gp10 family phage protein | - |
| RL01_RS00445 () | 68804..69184 | + | 381 | WP_000611454.1 | hypothetical protein | - |
| RL01_RS00450 () | 69185..70138 | + | 954 | WP_000570652.1 | Ig-like domain-containing protein | - |
| RL01_RS00455 () | 70203..70649 | + | 447 | WP_000442601.1 | hypothetical protein | - |
| RL01_RS00460 () | 70709..70831 | + | 123 | WP_000570353.1 | hypothetical protein | - |
| RL01_RS00465 () | 70887..75536 | + | 4650 | WP_001133533.1 | phage tail tape measure protein | - |
| RL01_RS00470 () | 75536..77026 | + | 1491 | WP_001154317.1 | phage tail family protein | - |
| RL01_RS00475 () | 77042..80824 | + | 3783 | WP_000582131.1 | hypothetical protein | - |
| RL01_RS00480 () | 80817..80969 | + | 153 | WP_001000058.1 | hypothetical protein | - |
| RL01_RS00485 () | 81015..81302 | + | 288 | WP_001262624.1 | hypothetical protein | - |
| RL01_RS00490 () | 81358..81732 | + | 375 | WP_000340977.1 | hypothetical protein | - |
| RL01_RS00495 () | 82105..82878 | + | 774 | WP_000750412.1 | Enterotoxin type A | VF |
| RL01_RS00500 () | 82987..83163 | + | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| - () | 83151..83325 | - | 175 | - | - | Antitoxin Detail |
| RL01_RS00510 () | 83375..83629 | + | 255 | WP_000611512.1 | phage holin | - |
| RL01_RS00515 () | 83641..84396 | + | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| RL01_RS00520 () | 84587..85078 | + | 492 | WP_000920039.1 | Staphylokinase | VF |
| RL01_RS00540 () | 85729..86064 | + | 336 | Protein_102 | SH3 domain-containing protein | - |
| RL01_RS00545 () | 86576..86926 | + | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| RL01_RS00550 () | 86979..87239 | - | 261 | WP_001791826.1 | hypothetical protein | - |
| RL01_RS00560 () | 87550..87729 | - | 180 | WP_000669791.1 | hypothetical protein | - |
| RL01_RS00565 () | 88051..88301 | - | 251 | Protein_106 | sphingomyelin phosphodiesterase | - |
| RL01_RS00570 () | 88687..90432 | + | 1746 | WP_001793419.1 | extracellular adherence protein Eap/Map | - |
| RL01_RS00575 () | 90423..90737 | + | 315 | Protein_108 | MAP domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus MW2 | Prophage | TA10154 | NC_003923 | 2047408..2102909 | 0.007 |