MGE detailed information
MGE type: Prophage MGE length: 55249 bp
Accession: NZ_CP026953 Location: 497814..553062 Organism: Staphylococcus aureus strain FDAARGOS_48 Replicon: chromosome
Accession: NZ_CP026953 Location: 497814..553062 Organism: Staphylococcus aureus strain FDAARGOS_48 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RL06_RS02710 () | 494319..494609 | - | 291 | WP_000671712.1 | MAP domain-containing protein | - |
| RL06_RS02715 () | 494620..496053 | - | 1434 | WP_001558588.1 | extracellular adherence protein Eap/Map | - |
| RL06_RS02720 () | 496439..496689 | + | 251 | Protein_489 | sphingomyelin phosphodiesterase | - |
| RL06_RS02725 () | 497011..497190 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| RL06_RS02735 () | 497501..497761 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| RL06_RS02740 () | 497814..498164 | - | 351 | WP_000702262.1 | Staphylococcal complement inhibitor | VF |
| RL06_RS02745 () | 498847..499296 | + | 450 | WP_000727645.1 | Chemotaxis inhibitory protein | VF |
| RL06_RS02750 () | 499389..499723 | - | 335 | Protein_494 | SH3 domain-containing protein | - |
| RL06_RS02770 () | 500374..500865 | - | 492 | WP_000920041.1 | Staphylokinase | VF |
| RL06_RS02775 () | 501056..501811 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| RL06_RS02780 () | 501823..502077 | - | 255 | WP_000611512.1 | phage holin | - |
| RL06_RS02785 () | 502129..502236 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - () | 502158..502297 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 502158..502297 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 502158..502297 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 502158..502297 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| RL06_RS02790 () | 502289..502465 | - | 177 | WP_072357969.1 | putative holin-like toxin | Toxin Detail |
| RL06_RS02795 () | 502608..502982 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| RL06_RS02800 () | 503038..503325 | - | 288 | WP_001262620.1 | hypothetical protein | - |
| RL06_RS02805 () | 503371..503523 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| RL06_RS02810 () | 503516..507298 | - | 3783 | WP_016170804.1 | hypothetical protein | - |
| RL06_RS02815 () | 507314..508798 | - | 1485 | WP_000567408.1 | phage tail family protein | - |
| RL06_RS02820 () | 508795..513324 | - | 4530 | WP_016170803.1 | phage tail tape measure protein | - |
| RL06_RS15005 () | 513381..513518 | - | 138 | WP_001837493.1 | hypothetical protein | - |
| RL06_RS02825 () | 513569..513919 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| RL06_RS02830 () | 513969..514193 | - | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| RL06_RS02835 () | 514235..514879 | - | 645 | WP_000268740.1 | phage tail protein | - |
| RL06_RS02840 () | 514880..515287 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| RL06_RS02845 () | 515284..515688 | - | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| RL06_RS02850 () | 515685..516047 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| RL06_RS02855 () | 516031..516315 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| RL06_RS02860 () | 516305..516589 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| RL06_RS02865 () | 516609..517754 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| RL06_RS02870 () | 517778..518515 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| RL06_RS02875 () | 518499..519686 | - | 1188 | WP_000025272.1 | phage portal protein | - |
| RL06_RS02880 () | 519702..521363 | - | 1662 | WP_016170799.1 | terminase large subunit | - |
| RL06_RS02885 () | 521360..521704 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| RL06_RS02890 () | 521834..522133 | - | 300 | WP_000988336.1 | HNH endonuclease | - |
| RL06_RS02895 () | 522365..522781 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| RL06_RS02900 () | 522809..523009 | - | 201 | WP_000265043.1 | DUF1514 family protein | - |
| RL06_RS02905 () | 523009..523158 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| RL06_RS02910 () | 523155..523541 | - | 387 | WP_000592202.1 | hypothetical protein | - |
| RL06_RS02915 () | 523534..523770 | - | 237 | WP_000608275.1 | hypothetical protein | - |
| RL06_RS02920 () | 523763..523966 | - | 204 | WP_000141180.1 | hypothetical protein | - |
| RL06_RS02925 () | 523963..524169 | - | 207 | WP_000195794.1 | DUF1381 domain-containing protein | - |
| RL06_RS02930 () | 524206..524739 | - | 534 | WP_023604907.1 | dUTP diphosphatase | - |
| RL06_RS15010 () | 524754..524915 | - | 162 | WP_000889682.1 | hypothetical protein | - |
| RL06_RS02935 () | 524916..525197 | - | 282 | Protein_530 | hypothetical protein | - |
| RL06_RS15015 () | 525198..525371 | - | 174 | WP_000028424.1 | hypothetical protein | Antitoxin Detail |
| RL06_RS02940 () | 525361..525612 | - | 252 | WP_001065046.1 | DUF1024 family protein | Toxin Detail |
| RL06_RS02945 () | 525605..525955 | - | 351 | WP_025176279.1 | hypothetical protein | - |
| RL06_RS02950 () | 525964..526206 | - | 243 | WP_023604909.1 | phi PVL orf 51-like protein | - |
| RL06_RS02955 () | 526210..526578 | - | 369 | WP_023604910.1 | hypothetical protein | - |
| RL06_RS02960 () | 526591..526996 | - | 406 | Protein_536 | RusA family crossover junction endodeoxyribonuclease | - |
| RL06_RS02965 () | 527005..527223 | - | 219 | WP_000338528.1 | hypothetical protein | - |
| RL06_RS02970 () | 527230..528099 | - | 870 | WP_025176251.1 | DnaD domain protein | - |
| RL06_RS02975 () | 528129..528599 | - | 471 | WP_000610649.1 | single-stranded DNA-binding protein | - |
| RL06_RS02980 () | 528600..529217 | - | 618 | WP_077517322.1 | MBL fold metallo-hydrolase | - |
| RL06_RS02985 () | 529298..530218 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| RL06_RS02990 () | 530220..532163 | - | 1944 | WP_023604913.1 | AAA family ATPase | - |
| RL06_RS02995 () | 532172..532435 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| RL06_RS03000 () | 532444..532704 | - | 261 | WP_000291504.1 | DUF1108 family protein | - |
| RL06_RS03005 () | 532709..533011 | - | 303 | WP_016170555.1 | DUF2482 family protein | - |
| RL06_RS03010 () | 533104..533265 | - | 162 | WP_000066011.1 | DUF1270 domain-containing protein | - |
| RL06_RS03015 () | 533262..533582 | - | 321 | WP_001120936.1 | DUF771 domain-containing protein | - |
| RL06_RS03020 () | 533612..533830 | - | 219 | WP_025176250.1 | hypothetical protein | - |
| RL06_RS03025 () | 533827..534153 | - | 327 | WP_001025595.1 | hypothetical protein | - |
| RL06_RS03035 () | 534480..534719 | - | 240 | WP_001294156.1 | hypothetical protein | - |
| RL06_RS03040 () | 534778..534981 | + | 204 | WP_016170553.1 | hypothetical protein | - |
| RL06_RS03045 () | 535098..535841 | - | 744 | WP_016170552.1 | phage antirepressor KilAC domain-containing protein | - |
| RL06_RS03050 () | 535892..536221 | + | 330 | WP_016170551.1 | hypothetical protein | - |
| RL06_RS03055 () | 536210..536425 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| RL06_RS03060 () | 536441..536704 | - | 264 | WP_000854072.1 | helix-turn-helix domain-containing protein | - |
| RL06_RS03065 () | 536701..536874 | - | 174 | WP_001801500.1 | hypothetical protein | - |
| RL06_RS03070 () | 536837..537550 | + | 714 | WP_016170550.1 | XRE family transcriptional regulator | - |
| RL06_RS03075 () | 537566..538498 | + | 933 | WP_016170549.1 | ATP-dependent helicase | - |
| RL06_RS03080 () | 538504..538845 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| RL06_RS03085 () | 539049..539231 | + | 183 | WP_000705248.1 | hypothetical protein | - |
| RL06_RS03090 () | 539331..539795 | + | 465 | WP_000825947.1 | hypothetical protein | - |
| RL06_RS03095 () | 539854..540891 | + | 1038 | WP_016170481.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| RL06_RS03100 () | 540942..541774 | + | 833 | Protein_563 | Phospholipase C | VF |
| RL06_RS03105 () | 542012..543028 | - | 1017 | WP_000595392.1 | putative leukocidin-like protein 1 | VF |
| RL06_RS03110 () | 543050..544105 | - | 1056 | WP_000791411.1 | putative leukocidin-like protein 2 | VF |
| RL06_RS03115 () | 544541..545764 | + | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| RL06_RS03120 () | 546208..547515 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| RL06_RS03130 () | 548055..549671 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| RL06_RS03135 () | 549747..550031 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| RL06_RS03140 () | 550206..550949 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| RL06_RS03145 () | 550974..552239 | - | 1266 | WP_031768733.1 | hypothetical protein | VF |
| RL06_RS03150 () | 552436..553062 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| RL06_RS03155 () | 553423..554208 | + | 786 | WP_000867951.1 | carbon-nitrogen family hydrolase | - |
| RL06_RS03160 () | 554808..554942 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
| RL06_RS03165 () | 555178..555741 | + | 564 | WP_001105696.1 | accessory gene regulator ArgB-like protein | - |
| RL06_RS03170 () | 555744..555887 | + | 144 | WP_001094921.1 | cyclic lactone autoinducer peptide | - |
| RL06_RS03175 () | 555917..557200 | + | 1284 | WP_000447888.1 | sensor histidine kinase | - |
| RL06_RS03180 () | 557219..557935 | + | 717 | WP_000688492.1 | LytTR family DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|