MGE detailed information
MGE type: Prophage MGE length: 52960 bp
Accession: NZ_CP026953 Location: 1603930..1656889 Organism: Staphylococcus aureus strain FDAARGOS_48 Replicon: chromosome
Accession: NZ_CP026953 Location: 1603930..1656889 Organism: Staphylococcus aureus strain FDAARGOS_48 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RL06_RS08410 () | 1599204..1600235 | + | 1032 | WP_000365197.1 | PTS sugar transporter subunit IIC | - |
| RL06_RS08415 () | 1600578..1601696 | + | 1119 | WP_001283968.1 | winged helix-turn-helix transcriptional regulator | - |
| RL06_RS08420 () | 1601671..1602594 | + | 924 | WP_000002071.1 | pseudouridine-5'-phosphate glycosidase | - |
| RL06_RS08425 () | 1602605..1603825 | + | 1221 | WP_001022972.1 | NupC/NupG family nucleoside CNT transporter | - |
| RL06_RS08430 () | 1603930..1605462 | - | 1533 | WP_000665727.1 | sodium:solute symporter | - |
| RL06_RS08435 () | 1605502..1606383 | - | 882 | WP_001030736.1 | N-acetylneuraminate lyase | - |
| RL06_RS08440 () | 1606541..1607401 | + | 861 | WP_000291444.1 | ROK family protein | - |
| RL06_RS08445 () | 1607678..1608478 | - | 801 | WP_000667382.1 | MurR/RpiR family transcriptional regulator | - |
| RL06_RS08450 () | 1608618..1609286 | + | 669 | WP_000936718.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| RL06_RS08455 () | 1609417..1610730 | - | 1314 | WP_001077725.1 | YjiH family protein | - |
| RL06_RS08460 () | 1611148..1613082 | + | 1935 | Protein_1563 | Lipase 2 | VF |
| RL06_RS08465 () | 1613176..1614381 | - | 1206 | WP_016170637.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| RL06_RS08470 () | 1614507..1615121 | + | 615 | WP_000191459.1 | hypothetical protein | - |
| RL06_RS08475 () | 1615118..1615264 | - | 147 | WP_001013104.1 | hypothetical protein | - |
| RL06_RS08480 () | 1615354..1615749 | - | 396 | WP_001558060.1 | hypothetical protein | - |
| RL06_RS08485 () | 1615778..1616212 | - | 435 | WP_016170817.1 | hypothetical protein | - |
| RL06_RS08490 () | 1616230..1616691 | - | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| RL06_RS08495 () | 1616704..1617018 | - | 315 | WP_000333630.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| RL06_RS08500 () | 1617170..1617406 | + | 237 | WP_001121027.1 | helix-turn-helix domain-containing protein | - |
| RL06_RS08505 () | 1617420..1618196 | + | 777 | WP_025176283.1 | Rha family transcriptional regulator | - |
| RL06_RS08510 () | 1618225..1618368 | + | 144 | WP_000939498.1 | hypothetical protein | - |
| RL06_RS08515 () | 1618358..1618567 | - | 210 | WP_000642492.1 | hypothetical protein | - |
| RL06_RS08520 () | 1618623..1618868 | + | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| RL06_RS08525 () | 1618837..1619202 | - | 366 | WP_016170627.1 | hypothetical protein | Antitoxin Detail |
| RL06_RS08530 () | 1619257..1619472 | + | 216 | WP_001097552.1 | hypothetical protein | - |
| RL06_RS08535 () | 1619497..1619760 | + | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| RL06_RS08540 () | 1619774..1619935 | + | 162 | WP_047211484.1 | DUF1270 family protein | - |
| RL06_RS08545 () | 1620027..1620287 | + | 261 | WP_000291090.1 | DUF1108 family protein | - |
| RL06_RS08550 () | 1620297..1620518 | + | 222 | WP_000815401.1 | DUF2483 family protein | - |
| RL06_RS08555 () | 1620511..1621134 | + | 624 | WP_000139720.1 | DUF1071 domain-containing protein | - |
| RL06_RS08560 () | 1621134..1621562 | + | 429 | WP_000934385.1 | single-stranded DNA-binding protein | - |
| RL06_RS08565 () | 1621576..1622250 | + | 675 | WP_031888948.1 | phi PV83 orf 19-like protein | - |
| RL06_RS08570 () | 1622357..1623205 | - | 849 | WP_000371251.1 | DUF4393 domain-containing protein | - |
| RL06_RS08575 () | 1623269..1623982 | + | 714 | WP_000132054.1 | helix-turn-helix domain-containing protein | - |
| RL06_RS08580 () | 1623992..1624771 | + | 780 | WP_000803056.1 | ATP-binding protein | - |
| RL06_RS15030 () | 1624765..1624926 | + | 162 | WP_000237153.1 | hypothetical protein | - |
| RL06_RS08585 () | 1624939..1625160 | + | 222 | WP_001123673.1 | DUF3269 family protein | - |
| RL06_RS08590 () | 1625170..1625574 | + | 405 | Protein_1590 | DUF1064 domain-containing protein | - |
| RL06_RS08595 () | 1625579..1625764 | + | 186 | WP_001187252.1 | DUF3113 family protein | - |
| RL06_RS08600 () | 1625765..1626382 | + | 618 | WP_000907339.1 | hypothetical protein | - |
| RL06_RS08605 () | 1626382..1626636 | + | 255 | WP_000022736.1 | DUF3310 domain-containing protein | - |
| RL06_RS08610 () | 1626636..1626884 | + | 249 | WP_060474161.1 | hypothetical protein | - |
| RL06_RS08615 () | 1626898..1627104 | + | 207 | WP_000693987.1 | hypothetical protein | - |
| RL06_RS08620 () | 1627107..1627511 | + | 405 | WP_000695756.1 | hypothetical protein | - |
| RL06_RS08625 () | 1627508..1627702 | + | 195 | WP_000983953.1 | hypothetical protein | - |
| RL06_RS08630 () | 1627699..1628070 | + | 372 | Protein_1598 | hypothetical protein | - |
| RL06_RS08635 () | 1628067..1628456 | + | 390 | WP_016060009.1 | hypothetical protein | - |
| RL06_RS08640 () | 1628449..1628697 | + | 249 | WP_001065061.1 | DUF1024 family protein | - |
| RL06_RS08645 () | 1628690..1629226 | + | 537 | WP_000185671.1 | dUTP diphosphatase | - |
| RL06_RS08650 () | 1629263..1629469 | + | 207 | WP_000195794.1 | DUF1381 domain-containing protein | - |
| RL06_RS08655 () | 1629466..1629669 | + | 204 | WP_000141180.1 | hypothetical protein | - |
| RL06_RS08660 () | 1629662..1629898 | + | 237 | WP_000608275.1 | hypothetical protein | - |
| RL06_RS08665 () | 1629888..1630277 | + | 390 | WP_171012236.1 | hypothetical protein | - |
| RL06_RS08670 () | 1630274..1630426 | + | 153 | WP_000595263.1 | transcriptional activator RinB | - |
| RL06_RS08675 () | 1630494..1630694 | + | 201 | WP_000265252.1 | DUF1514 family protein | - |
| RL06_RS08685 () | 1630982..1632253 | + | 1272 | WP_047211486.1 | hypothetical protein | - |
| RL06_RS08690 () | 1632266..1632703 | + | 438 | WP_000513701.1 | transcriptional regulator | - |
| RL06_RS08695 () | 1632865..1633179 | + | 315 | WP_000196700.1 | HNH endonuclease | - |
| RL06_RS08700 () | 1633305..1633610 | + | 306 | WP_000778930.1 | P27 family phage terminase small subunit | - |
| RL06_RS08705 () | 1633600..1635291 | + | 1692 | WP_000153549.1 | terminase large subunit | - |
| RL06_RS08710 () | 1635296..1636534 | + | 1239 | WP_001100670.1 | phage portal protein | - |
| RL06_RS08715 () | 1636518..1637291 | + | 774 | WP_000061868.1 | Clp protease ClpP | - |
| RL06_RS08720 () | 1637303..1638466 | + | 1164 | WP_001142735.1 | phage major capsid protein | - |
| RL06_RS08725 () | 1638535..1638813 | + | 279 | WP_000050975.1 | head-tail connector protein | - |
| RL06_RS08730 () | 1638825..1639157 | + | 333 | WP_000395501.1 | hypothetical protein | - |
| RL06_RS08735 () | 1639154..1639555 | + | 402 | WP_000110020.1 | hypothetical protein | - |
| RL06_RS08740 () | 1639556..1639951 | + | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| RL06_RS08745 () | 1639986..1640627 | + | 642 | WP_000807540.1 | tail protein | - |
| RL06_RS08750 () | 1640719..1641174 | + | 456 | WP_000169127.1 | Ig domain-containing protein | - |
| RL06_RS08755 () | 1641232..1641582 | + | 351 | WP_000589167.1 | hypothetical protein | - |
| RL06_RS08760 () | 1641624..1641782 | + | 159 | WP_000438833.1 | hypothetical protein | - |
| RL06_RS08765 () | 1641796..1647996 | + | 6201 | WP_047211487.1 | phage tail tape measure protein | - |
| RL06_RS08770 () | 1647996..1648820 | + | 825 | WP_001190533.1 | phage tail family protein | - |
| RL06_RS08775 () | 1648829..1650412 | + | 1584 | WP_000384462.1 | prophage endopeptidase tail family protein | - |
| RL06_RS08780 () | 1650412..1650702 | + | 291 | WP_000179860.1 | hypothetical protein | - |
| RL06_RS08785 () | 1650718..1652628 | + | 1911 | WP_016170708.1 | hypothetical protein | - |
| RL06_RS08790 () | 1652628..1654094 | + | 1467 | WP_047211488.1 | BppU family phage baseplate upper protein | - |
| RL06_RS08795 () | 1654094..1654483 | + | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| RL06_RS08800 () | 1654476..1654640 | + | 165 | WP_000916020.1 | XkdX family protein | - |
| RL06_RS08805 () | 1654686..1654985 | + | 300 | WP_000466775.1 | DUF2951 family protein | - |
| RL06_RS08810 () | 1655121..1655423 | + | 303 | WP_000339146.1 | phage holin | - |
| RL06_RS08815 () | 1655435..1656889 | + | 1455 | WP_047211489.1 | N-acetylmuramoyl-L-alanine amidase | - |
| RL06_RS08835 () | 1658025..1658852 | - | 828 | WP_000136054.1 | alpha/beta hydrolase | - |
| RL06_RS08840 () | 1658925..1660124 | - | 1200 | WP_000286459.1 | NADH-dependent flavin oxidoreductase | - |
| RL06_RS08845 () | 1660220..1660312 | + | 93 | WP_001802007.1 | hypothetical protein | - |
| RL06_RS08850 () | 1660426..1661427 | + | 1002 | WP_000240063.1 | LLM class flavin-dependent oxidoreductase | - |
| RL06_RS08855 () | 1661461..1661793 | + | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|