MGE detailed information
MGE type: IScluster/Tn MGE length: 14585 bp
Accession: NZ_CP026930 Location: 46524..61108 Organism: Escherichia coli strain CFS3246 Replicon: plasmid pCFS3246-1
Accession: NZ_CP026930 Location: 46524..61108 Organism: Escherichia coli strain CFS3246 Replicon: plasmid pCFS3246-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4962_RS23390 () | 41885..46576 | - | 4692 | Protein_51 | conjugative transfer relaxase/helicase TraI | - |
| C4962_RS23395 () | 46524..49409 | - | 2886 | WP_001138082.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| C4962_RS23400 () | 49535..49996 | + | 462 | Protein_53 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| C4962_RS23405 () | 50050..50754 | - | 705 | WP_001067845.1 | IS6 family transposase IS26 | Transposase |
| C4962_RS23410 () | 50817..51041 | - | 225 | Protein_55 | Tn3 family transposase TnpA_Tn3 | Transposase |
| C4962_RS23415 () | 51205..51762 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| C4962_RS23420 () | 51869..52573 | + | 705 | WP_001067845.1 | IS6 family transposase IS26 | Transposase |
| C4962_RS23425 () | 52666..53013 | - | 348 | WP_000142451.1 | hypothetical protein | - |
| C4962_RS23430 () | 53142..53477 | + | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| C4962_RS23435 () | 53499..53858 | - | 360 | WP_085452786.1 | colicin | - |
| C4962_RS23440 () | 53932..54629 | + | 698 | Protein_61 | IS1 family transposase | - |
| C4962_RS23445 () | 54679..54954 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C4962_RS23450 () | 54954..55238 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C4962_RS23455 () | 55638..55851 | - | 214 | Protein_64 | transposase | - |
| C4962_RS23460 () | 56181..57041 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| C4962_RS23465 () | 57241..57945 | - | 705 | WP_001067845.1 | IS6 family transposase IS26 | Transposase |
| C4962_RS23475 () | 58233..59362 | + | 1130 | WP_085959879.1 | IS3 family transposase IS1133 | Transposase |
| C4962_RS23480 () | 59469..60272 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| C4962_RS23485 () | 60272..61108 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| C4962_RS23490 () | 61012..61215 | + | 204 | Protein_70 | mobilization protein (MobL-like) | - |
| C4962_RS23495 () | 61213..61883 | - | 671 | Protein_71 | conjugative relaxase | - |
| C4962_RS23500 () | 61965..62192 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| C4962_RS23505 () | 62192..62590 | + | 399 | WP_000911314.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| C4962_RS23510 () | 62599..64752 | - | 2154 | WP_001375140.1 | type IV conjugative transfer system coupling protein TraD | - |
| C4962_RS23515 () | 65005..65736 | - | 732 | WP_000850426.1 | complement resistance protein TraT | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|