MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 69799 bp
Accession: NZ_CP026879 Location: 1..69799 Organism: Shigella dysenteriae strain 07-3308 Replicon: plasmid unnamed
Accession: NZ_CP026879 Location: 1..69799 Organism: Shigella dysenteriae strain 07-3308 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P62_RS23925 () | 594..1436 | - | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| C1P62_RS23930 () | 1800..1916 | - | 117 | WP_004996477.1 | hypothetical protein | - |
| C1P62_RS23935 () | 1919..4831 | + | 2913 | WP_023636847.1 | ankyrin repeat protein | - |
| C1P62_RS23940 () | 4861..5185 | - | 325 | Protein_4 | IS3 family transposase | - |
| C1P62_RS25825 () | 5183..5374 | + | 192 | Protein_5 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P62_RS23950 () | 5388..6734 | - | 1347 | Protein_6 | IS4 family transposase IS4 | Transposase |
| C1P62_RS25830 () | 6797..7081 | - | 285 | Protein_7 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P62_RS23960 () | 7420..8010 | - | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| C1P62_RS25950 () | 8039..8265 | - | 227 | Protein_9 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C1P62_RS23970 () | 8262..8531 | - | 270 | WP_000079957.1 | hypothetical protein | - |
| C1P62_RS23975 () | 8739..10376 | - | 1638 | WP_000936810.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C1P62_RS23980 () | 10590..11283 | - | 694 | Protein_12 | IS1 family transposase | - |
| C1P62_RS23985 () | 11411..11506 | - | 96 | Protein_13 | transposase domain-containing protein | - |
| C1P62_RS23990 () | 11542..11847 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C1P62_RS23995 () | 11849..12067 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C1P62_RS24000 () | 12307..13000 | + | 694 | Protein_16 | IS1 family transposase | - |
| C1P62_RS24005 () | 13376..14466 | - | 1091 | Protein_17 | IS66 family transposase ISEc49 | Transposase |
| C1P62_RS24010 () | 14474..15042 | + | 569 | Protein_18 | plasmid segregation protein ParM | - |
| C1P62_RS24015 () | 15045..15410 | + | 366 | WP_000361391.1 | plasmid partitioning/stability family protein | - |
| C1P62_RS25835 () | 15502..15639 | + | 138 | WP_000766699.1 | hypothetical protein | - |
| C1P62_RS24020 () | 15771..16046 | - | 276 | WP_000421263.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P62_RS24025 () | 16046..16330 | - | 285 | WP_001178088.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C1P62_RS24040 () | 17082..17291 | + | 210 | Protein_23 | peptidoglycan-binding protein | - |
| C1P62_RS24045 () | 17391..17576 | - | 186 | Protein_24 | IS21 family transposase IS100 | Transposase |
| C1P62_RS24055 () | 17912..18381 | + | 470 | Protein_25 | IS1 family transposase IS1N | Transposase |
| C1P62_RS25840 () | 18540..19178 | + | 639 | WP_000607008.1 | hypothetical protein | VF |
| C1P62_RS24065 () | 19293..19826 | + | 534 | Protein_27 | transposase | - |
| C1P62_RS25845 () | 19880..20020 | + | 141 | Protein_28 | IS3 family transposase IS2 | Transposase |
| C1P62_RS24070 () | 20085..20485 | + | 401 | Protein_29 | IS3 family transposase ISSfl10 | Transposase |
| C1P62_RS24075 () | 20541..21237 | + | 697 | Protein_30 | IS1 family transposase | - |
| C1P62_RS24080 () | 21253..22017 | + | 765 | Protein_31 | IS3 family transposase ISSd1 | Transposase |
| C1P62_RS25955 () | 21986..22061 | - | 76 | Protein_32 | aspartate oxidase | - |
| C1P62_RS24085 () | 22062..22385 | - | 324 | Protein_33 | DUF1281 domain-containing protein | - |
| C1P62_RS24095 () | 22824..23783 | + | 960 | WP_000921950.1 | plasmid segregation protein ParM | - |
| C1P62_RS24100 () | 23783..24178 | + | 396 | WP_000445931.1 | plasmid partitioning/stability family protein | - |
| C1P62_RS24105 () | 24358..24738 | + | 381 | WP_005015412.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| C1P62_RS24110 () | 24784..25628 | + | 845 | WP_134802192.1 | IS5 family transposase ISSfl7 | Transposase |
| C1P62_RS24120 () | 25777..27231 | - | 1455 | WP_000701102.1 | hypothetical protein | VF |
| C1P62_RS24125 () | 27656..28500 | + | 845 | Protein_39 | IS5 family transposase ISSfl7 | Transposase |
| C1P62_RS24130 () | 28670..29419 | - | 750 | WP_000828660.1 | phosphatase PAP2 family protein | - |
| C1P62_RS24145 () | 30597..30872 | - | 276 | Protein_42 | 5'-nucleotidase C-terminal domain-containing protein | - |
| C1P62_RS24155 () | 32206..33585 | - | 1380 | Protein_44 | bifunctional UDP-sugar hydrolase/5'-nucleotidase | - |
| C1P62_RS24160 () | 33926..35135 | - | 1210 | Protein_45 | IS3 family transposase IS629 | Transposase |
| C1P62_RS24165 () | 35201..35368 | - | 168 | Protein_46 | IS3 family transposase ISKpn38 | Transposase |
| C1P62_RS24170 () | 35409..35750 | - | 342 | Protein_47 | IS4 family transposase ISEc13 | Transposase |
| C1P62_RS24175 () | 35729..36435 | - | 707 | Protein_48 | IS256 family transposase IS1414 | Transposase |
| C1P62_RS24185 () | 36650..37343 | + | 694 | Protein_49 | IS1-like element IS1N family transposase | - |
| C1P62_RS24190 () | 37640..39337 | - | 1698 | WP_005015229.1 | hypothetical protein | VF |
| C1P62_RS24195 () | 39413..39546 | + | 134 | Protein_51 | IS1 family transposase | - |
| C1P62_RS24200 () | 39645..41057 | - | 1413 | WP_011379035.1 | hypothetical protein | VF |
| C1P62_RS24210 () | 42068..42625 | + | 558 | Protein_53 | IS110 family transposase ISEc11 | Transposase |
| C1P62_RS24215 () | 42672..43881 | + | 1210 | Protein_54 | IS3 family transposase IS629 | Transposase |
| C1P62_RS25850 () | 43884..44096 | - | 213 | WP_134801807.1 | hypothetical protein | - |
| C1P62_RS24225 () | 44076..44769 | + | 694 | Protein_56 | IS1 family transposase | - |
| C1P62_RS24230 () | 44784..45220 | - | 437 | Protein_57 | IS3 family transposase ISSfl11 | Transposase |
| C1P62_RS25855 () | 45259..45393 | + | 135 | Protein_58 | hypothetical protein | - |
| C1P62_RS24235 () | 45388..46541 | - | 1154 | Protein_59 | Serine protease SepA autotransporter | VF |
| C1P62_RS24240 () | 46701..46883 | + | 183 | WP_000895967.1 | hypothetical protein | - |
| C1P62_RS24245 () | 46903..47175 | + | 273 | WP_000019161.1 | hypothetical protein | - |
| C1P62_RS24250 () | 47156..48364 | + | 1209 | WP_134806339.1 | IS91 family transposase ISSbo1 | Transposase |
| C1P62_RS24255 () | 49476..50330 | - | 855 | Protein_63 | incFII family plasmid replication initiator RepA | - |
| C1P62_RS24260 () | 50323..50397 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C1P62_RS24270 () | 50621..50881 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| C1P62_RS24275 () | 51121..51633 | - | 513 | Protein_66 | DUF2726 domain-containing protein | - |
| C1P62_RS24280 () | 51681..52374 | + | 694 | Protein_67 | IS1 family transposase | - |
| C1P62_RS24285 () | 52523..52731 | - | 209 | Protein_68 | hemolysin expression modulator Hha | - |
| C1P62_RS24290 () | 52777..53094 | - | 318 | Protein_69 | thermonuclease family protein | - |
| C1P62_RS24295 () | 53141..53837 | + | 697 | Protein_70 | IS1 family transposase | - |
| C1P62_RS24300 () | 53853..54014 | - | 162 | Protein_71 | endonuclease | - |
| C1P62_RS24310 () | 54258..54470 | - | 213 | WP_004971339.1 | ANR family transcriptional regulator | - |
| C1P62_RS24315 () | 54600..55160 | - | 561 | WP_000139365.1 | fertility inhibition protein FinO | - |
| C1P62_RS24320 () | 55215..55961 | - | 747 | WP_000205723.1 | conjugal transfer pilus acetylase TraX | - |
| C1P62_RS24325 () | 55981..60837 | - | 4857 | WP_005015506.1 | Multifunctional conjugation protein TraI | Relaxase |
| C1P62_RS24330 () | 60824..61243 | - | 420 | WP_011379018.1 | Multifunctional conjugation protein TraI | Relaxase |
| C1P62_RS24335 () | 61325..61552 | + | 228 | WP_000450529.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| C1P62_RS24340 () | 61552..61950 | + | 399 | WP_000911312.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| C1P62_RS24345 () | 61959..63740 | - | 1782 | Protein_79 | type IV conjugative transfer system coupling protein TraD | - |
| C1P62_RS24350 () | 63806..64962 | + | 1157 | WP_134806340.1 | IS3 family transposase ISSd1 | Transposase |
| C1P62_RS24355 () | 64987..65759 | - | 773 | Protein_81 | IS4 family transposase IS421 | Transposase |
| C1P62_RS24360 () | 65932..66354 | + | 423 | Protein_82 | hypothetical protein | - |
| C1P62_RS25960 () | 66499..66630 | - | 132 | Protein_83 | IS66 family transposase ISCro1 | Transposase |
| C1P62_RS24365 () | 66628..67143 | - | 516 | Protein_84 | IS66 family transposase ISCro1 | Transposase |
| C1P62_RS24370 () | 67341..68284 | - | 944 | Protein_85 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| C1P62_RS24375 () | 68349..69298 | - | 950 | Protein_86 | virulence factor VirK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|