MGE detailed information
MGE type: IScluster/Tn MGE length: 42124 bp
Accession: NZ_CP026841 Location: 156870..198993 Organism: Shigella dysenteriae strain ATCC 9753 Replicon: plasmid unnamed
Accession: NZ_CP026841 Location: 156870..198993 Organism: Shigella dysenteriae strain ATCC 9753 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P67_RS25950 | 153614..153841 | + | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| C1P67_RS25955 | 153841..154239 | + | 399 | WP_000911318.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C1P67_RS25960 | 154248..156428 | - | 2181 | WP_134807529.1 | type IV conjugative transfer system coupling protein TraD | - |
| C1P67_RS25965 | 156676..157373 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| C1P67_RS25970 | 157389..158060 | + | 672 | Protein_193 | IS630 family transposase IS630 | Transposase |
| C1P67_RS25975 | 158214..159158 | - | 945 | WP_005027201.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| C1P67_RS25980 | 159223..160173 | - | 951 | WP_005027204.1 | virulence factor VirK | - |
| C1P67_RS25985 | 160178..161266 | - | 1089 | WP_005027207.1 | putative hexosyltransferase CapU | - |
| C1P67_RS25990 | 161269..162111 | - | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| C1P67_RS26000 | 162772..164000 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| C1P67_RS26005 | 164134..164831 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| C1P67_RS26010 | 164849..165331 | - | 483 | Protein_200 | Protein kinase OspG | VF |
| C1P67_RS27560 | 165414..165583 | - | 170 | Protein_201 | type II toxin-antitoxin system toxin YacB | - |
| C1P67_RS26020 | 165583..165852 | - | 270 | WP_000079956.1 | type II toxin-antitoxin system antitoxin YacA | - |
| C1P67_RS26025 | 166060..167697 | - | 1638 | WP_129593020.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C1P67_RS26030 | 167959..168066 | - | 108 | WP_023592908.1 | transposase domain-containing protein | - |
| C1P67_RS26035 | 168090..168395 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C1P67_RS26040 | 168397..168615 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C1P67_RS26050 | 169208..169480 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| C1P67_RS26055 | 169575..170788 | + | 1214 | WP_171764190.1 | IS3 family transposase IS629 | Transposase |
| C1P67_RS26065 | 170852..171982 | + | 1131 | WP_134807531.1 | IS91 family transposase ISSbo1 | Transposase |
| C1P67_RS26070 | 172177..173268 | - | 1092 | Protein_210 | IS66 family transposase ISEc49 | Transposase |
| C1P67_RS26075 | 173276..173843 | + | 568 | Protein_211 | plasmid segregation protein ParM | - |
| C1P67_RS27565 | 173846..174028 | + | 183 | WP_241547534.1 | plasmid partitioning/stability family protein | - |
| C1P67_RS26875 | 174304..174441 | + | 138 | WP_000766699.1 | hypothetical protein | - |
| C1P67_RS26085 | 174573..174848 | - | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P67_RS26090 | 174848..175132 | - | 285 | WP_001178088.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C1P67_RS26105 | 175884..176093 | + | 210 | Protein_216 | peptidoglycan-binding protein | - |
| C1P67_RS27570 | 176175..176276 | - | 102 | Protein_217 | ATP-binding protein | - |
| C1P67_RS26110 | 176428..176784 | + | 357 | WP_000239757.1 | IS66 family transposase IS682 | Transposase |
| C1P67_RS26115 | 176781..177131 | + | 351 | WP_000624671.1 | IS66 family transposase IS682 | Transposase |
| C1P67_RS26120 | 177162..178754 | + | 1593 | WP_001072394.1 | IS66 family transposase ISEc43 | Transposase |
| C1P67_RS26880 | 178761..178892 | - | 132 | Protein_221 | ATP-binding protein | - |
| C1P67_RS26130 | 179111..179785 | + | 675 | WP_047204740.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P67_RS26135 | 179782..179946 | + | 165 | Protein_223 | IS66 family transposase ISSfl3 | Transposase |
| C1P67_RS26140 | 180095..180256 | + | 162 | Protein_224 | IS110 family transposase ISEc11 | Transposase |
| C1P67_RS26145 | 180329..181497 | + | 1169 | WP_094096743.1 | IS3 family transposase IS911 | Transposase |
| C1P67_RS26165 | 182516..183475 | + | 960 | WP_046891834.1 | plasmid segregation protein ParM | - |
| C1P67_RS26170 | 183475..183870 | + | 396 | WP_000445931.1 | plasmid partitioning/stability family protein | - |
| C1P67_RS26180 | 185404..185769 | + | 366 | WP_073691780.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| C1P67_RS26185 | 185815..186659 | + | 845 | Protein_230 | IS5 family transposase ISSfl7 | Transposase |
| C1P67_RS27575 | 186672..186776 | + | 105 | Protein_231 | hypothetical protein | - |
| C1P67_RS26190 | 186831..187580 | - | 750 | WP_000828661.1 | phosphatase PAP2 family protein | - |
| C1P67_RS26195 | 187909..188606 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| C1P67_RS26205 | 188720..188935 | + | 216 | Protein_234 | IS3 family transposase IS600 | Transposase |
| C1P67_RS26210 | 189062..189583 | + | 522 | Protein_235 | reverse transcriptase domain-containing protein | - |
| C1P67_RS26215 | 189639..190852 | + | 1214 | WP_171764190.1 | IS3 family transposase IS629 | Transposase |
| C1P67_RS26220 | 191011..192179 | + | 1169 | WP_094112608.1 | IS3 family transposase IS911 | Transposase |
| C1P67_RS26225 | 192187..192477 | + | 291 | Protein_238 | group II intron maturase-specific domain-containing protein | - |
| C1P67_RS26230 | 192551..192670 | + | 120 | Protein_239 | transposase domain-containing protein | - |
| C1P67_RS26235 | 192710..192832 | - | 123 | Protein_240 | IS1 family transposase | - |
| C1P67_RS26240 | 192871..194409 | - | 1539 | WP_000099180.1 | IS66 family transposase ISEc22 | Transposase |
| C1P67_RS26245 | 194458..194805 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| C1P67_RS26250 | 194802..195182 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C1P67_RS26255 | 195241..195433 | - | 193 | Protein_244 | IS1 family transposase | - |
| C1P67_RS26265 | 195606..195776 | + | 171 | Protein_245 | transposase | - |
| C1P67_RS26270 | 195787..197439 | - | 1653 | WP_046891837.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| C1P67_RS26280 | 199166..199484 | - | 319 | Protein_248 | fimbria/pilus outer membrane usher protein | - |
| C1P67_RS26285 | 199628..202936 | - | 3309 | WP_047204659.1 | outer membrane autotransporter IcsA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|