MGE detailed information
MGE type: IScluster/Tn MGE length: 21004 bp
Accession: NZ_CP026837 Location: 14515..35518 Organism: Shigella boydii strain ATCC 49812 Replicon: plasmid unnamed
Accession: NZ_CP026837 Location: 14515..35518 Organism: Shigella boydii strain ATCC 49812 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P56_RS26000 | 9721..10563 | - | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| C1P56_RS26010 | 11046..13958 | + | 2913 | WP_164834456.1 | ankyrin repeat domain-containing protein | - |
| C1P56_RS26015 | 13988..14312 | - | 325 | Protein_15 | IS3 family transposase | - |
| C1P56_RS27955 | 14310..14501 | + | 192 | Protein_16 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P56_RS26025 | 14515..15861 | - | 1347 | WP_000483768.1 | IS4 family transposase IS4 | Transposase |
| C1P56_RS27960 | 15924..16191 | - | 268 | Protein_18 | IS66 family transposase ISCro1 | Transposase |
| C1P56_RS26035 | 16548..17138 | - | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| C1P56_RS28775 | 17221..17390 | - | 170 | Protein_20 | type II toxin-antitoxin system toxin YacB | - |
| C1P56_RS26045 | 17390..17659 | - | 270 | WP_000079956.1 | type II toxin-antitoxin system antitoxin YacA | - |
| C1P56_RS26050 | 17867..19504 | - | 1638 | WP_134796740.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C1P56_RS26055 | 19766..19873 | - | 108 | WP_023592908.1 | transposase domain-containing protein | - |
| C1P56_RS26060 | 19989..21020 | + | 1032 | WP_001121440.1 | IS630 family transposase IS630 | Transposase |
| C1P56_RS26065 | 21052..21357 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C1P56_RS26070 | 21359..21577 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C1P56_RS26075 | 22113..23204 | - | 1092 | Protein_27 | IS66 family transposase ISEc49 | Transposase |
| C1P56_RS26080 | 23212..23781 | + | 570 | Protein_28 | plasmid segregation protein ParM | - |
| C1P56_RS26085 | 23784..24134 | + | 351 | WP_134796741.1 | plasmid partitioning/stability family protein | - |
| C1P56_RS27965 | 24241..24378 | + | 138 | WP_000766699.1 | hypothetical protein | - |
| C1P56_RS26090 | 24510..24785 | - | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P56_RS26095 | 24785..25069 | - | 285 | WP_001178088.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C1P56_RS26105 | 25521..25772 | + | 252 | WP_000433928.1 | transporter | - |
| C1P56_RS26110 | 25822..26031 | + | 210 | Protein_34 | peptidoglycan-binding protein | - |
| C1P56_RS26115 | 26131..26316 | - | 186 | Protein_35 | IS21 family transposase IS100 | Transposase |
| C1P56_RS28780 | 26639..26743 | - | 105 | WP_075288148.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P56_RS28785 | 26765..27259 | - | 495 | Protein_37 | IS66 family transposase ISSfl3 | Transposase |
| C1P56_RS28790 | 27199..28098 | - | 900 | WP_284542780.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P56_RS26125 | 28265..28612 | - | 348 | WP_000631709.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P56_RS26130 | 28609..29283 | - | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P56_RS26135 | 29367..30214 | - | 848 | Protein_41 | IS3-like element IS2 family transposase | - |
| C1P56_RS26140 | 30302..30571 | - | 270 | Protein_42 | IS3 family transposase ISEc48 | Transposase |
| C1P56_RS27970 | 30686..31324 | - | 639 | WP_000607008.1 | hypothetical protein | VF |
| C1P56_RS26150 | 31483..31953 | - | 471 | Protein_44 | IS1 family transposase IS1N | Transposase |
| C1P56_RS26155 | 32110..32784 | + | 675 | WP_119172049.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P56_RS26160 | 32781..33128 | + | 348 | WP_000631709.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P56_RS28795 | 33295..34194 | + | 900 | WP_284542724.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P56_RS28800 | 34134..34628 | + | 495 | Protein_48 | IS66 family transposase ISSfl3 | Transposase |
| C1P56_RS28805 | 34650..34754 | + | 105 | WP_075288148.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P56_RS26170 | 34763..35518 | + | 756 | Protein_50 | IS110 family transposase ISSfl8 | Transposase |
| C1P56_RS26180 | 35821..36591 | - | 771 | WP_119172639.1 | hypothetical protein | - |
| C1P56_RS26185 | 36636..37122 | - | 487 | Protein_52 | DUF1380 family protein | - |
| C1P56_RS26190 | 37082..37301 | - | 220 | Protein_53 | hypothetical protein | - |
| C1P56_RS26195 | 37302..37985 | - | 684 | Protein_54 | DNA methylase | - |
| C1P56_RS26200 | 38049..38360 | - | 312 | WP_165850904.1 | hypothetical protein | - |
| C1P56_RS26205 | 38357..39199 | - | 843 | WP_133299704.1 | DUF1281 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|