MGE detailed information
MGE type: IScluster/Tn MGE length: 13584 bp
Accession: NZ_CP026835 Location: 85303..98886 Organism: Shigella dysenteriae strain ATCC 49347 Replicon: plasmid unnamed
Accession: NZ_CP026835 Location: 85303..98886 Organism: Shigella dysenteriae strain ATCC 49347 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B83_RS25150 | 80316..81259 | - | 944 | Protein_105 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| C5B83_RS25155 | 81324..82274 | - | 951 | WP_005045525.1 | virulence factor VirK | - |
| C5B83_RS25160 | 82279..83367 | - | 1089 | WP_005027207.1 | putative hexosyltransferase CapU | - |
| C5B83_RS25165 | 83370..84212 | - | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| C5B83_RS26320 | 84695..84847 | + | 153 | Protein_109 | hypothetical protein | - |
| C5B83_RS25175 | 84899..85596 | + | 698 | WP_094106546.1 | IS1 family transposase | - |
| C5B83_RS25180 | 85614..86096 | - | 483 | Protein_111 | Protein kinase OspG | VF |
| C5B83_RS26325 | 86179..86348 | - | 170 | Protein_112 | type II toxin-antitoxin system toxin YacB | - |
| C5B83_RS25190 | 86348..86617 | - | 270 | WP_000079956.1 | type II toxin-antitoxin system antitoxin YacA | - |
| C5B83_RS25195 | 86825..88462 | - | 1638 | WP_129593020.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C5B83_RS25200 | 88724..88831 | - | 108 | WP_023592908.1 | transposase domain-containing protein | - |
| C5B83_RS25205 | 88855..89160 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C5B83_RS25210 | 89162..89380 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C5B83_RS25215 | 89624..90852 | + | 1229 | Protein_118 | IS3-like element IS2 family transposase | - |
| C5B83_RS25225 | 91309..91581 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| C5B83_RS25230 | 91676..92889 | + | 1214 | WP_167544920.1 | IS3 family transposase IS629 | Transposase |
| C5B83_RS25240 | 92953..94083 | + | 1131 | WP_050546159.1 | IS91 family transposase ISSbo1 | Transposase |
| C5B83_RS25245 | 94278..95369 | - | 1092 | Protein_122 | IS66 family transposase ISEc49 | Transposase |
| C5B83_RS25250 | 95377..95944 | + | 568 | Protein_123 | plasmid segregation protein ParM | - |
| C5B83_RS26330 | 95947..96129 | + | 183 | WP_241547534.1 | plasmid partitioning/stability family protein | - |
| C5B83_RS25755 | 96405..96542 | + | 138 | WP_000766699.1 | hypothetical protein | - |
| C5B83_RS25260 | 96674..96949 | - | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C5B83_RS25265 | 96949..97233 | - | 285 | WP_001178088.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C5B83_RS25275 | 97685..97936 | + | 252 | WP_000433928.1 | transporter | - |
| C5B83_RS25280 | 97986..98195 | + | 210 | Protein_129 | peptidoglycan-binding protein | - |
| C5B83_RS26335 | 98277..98378 | - | 102 | Protein_130 | ATP-binding protein | - |
| C5B83_RS25285 | 98530..98886 | + | 357 | WP_000239757.1 | IS66 family transposase IS682 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|