MGE detailed information
MGE type: IScluster/Tn MGE length: 42504 bp
Accession: NZ_CP026833 Location: 122001..164504 Organism: Shigella dysenteriae strain ATCC 49346 Replicon: plasmid unnamed
Accession: NZ_CP026833 Location: 122001..164504 Organism: Shigella dysenteriae strain ATCC 49346 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B81_RS25065 | 118062..121366 | + | 3305 | Protein_141 | outer membrane autotransporter IcsA | - |
| C5B81_RS25070 | 121510..121828 | + | 319 | Protein_142 | fimbria/pilus outer membrane usher protein | - |
| C5B81_RS25075 | 122001..123213 | + | 1213 | Protein_143 | IS3 family transposase IS629 | Transposase |
| C5B81_RS25080 | 123554..125206 | + | 1653 | WP_046891837.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| C5B81_RS25085 | 125217..125387 | - | 171 | Protein_145 | transposase | - |
| C5B81_RS25095 | 125560..125752 | + | 193 | Protein_146 | IS1 family transposase | - |
| C5B81_RS25100 | 125811..126191 | + | 381 | WP_001171522.1 | IS66 family transposase ISEc8 | Transposase |
| C5B81_RS25105 | 126188..126535 | + | 348 | WP_000612610.1 | IS66 family transposase ISKpn24 | Transposase |
| C5B81_RS25110 | 126584..128122 | + | 1539 | WP_000099181.1 | IS66 family transposase ISEc22 | Transposase |
| C5B81_RS25115 | 128161..128283 | + | 123 | Protein_150 | IS1 family transposase | - |
| C5B81_RS25120 | 128323..128442 | - | 120 | Protein_151 | transposase domain-containing protein | - |
| C5B81_RS25125 | 128516..128806 | - | 291 | Protein_152 | group II intron maturase-specific domain-containing protein | - |
| C5B81_RS25145 | 131410..131931 | - | 522 | Protein_155 | reverse transcriptase domain-containing protein | - |
| C5B81_RS25150 | 132058..132261 | - | 204 | Protein_156 | IS3 family transposase IS600 | Transposase |
| C5B81_RS25155 | 132338..133035 | + | 698 | WP_284513892.1 | IS1 family transposase IS1R | Transposase |
| C5B81_RS25160 | 133067..133531 | + | 465 | Protein_158 | phosphatase PAP2 family protein | - |
| C5B81_RS25165 | 133587..134284 | + | 698 | WP_284513892.1 | IS1 family transposase IS1R | Transposase |
| C5B81_RS25170 | 134297..134593 | + | 297 | Protein_160 | phosphatase PAP2 family protein | - |
| C5B81_RS27050 | 134648..134752 | - | 105 | Protein_161 | hypothetical protein | - |
| C5B81_RS25180 | 135655..136020 | - | 366 | WP_073691780.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| C5B81_RS25185 | 136113..137341 | + | 1229 | WP_167693635.1 | IS3 family transposase IS2 | Transposase |
| C5B81_RS25190 | 137509..137904 | - | 396 | WP_000445931.1 | plasmid partitioning/stability family protein | - |
| C5B81_RS25195 | 137904..138863 | - | 960 | WP_046891834.1 | plasmid segregation protein ParM | - |
| C5B81_RS25220 | 141122..141283 | - | 162 | Protein_168 | IS110 family transposase ISEc11 | Transposase |
| C5B81_RS25225 | 141432..141596 | - | 165 | Protein_169 | IS66 family transposase ISSfl3 | Transposase |
| C5B81_RS25230 | 141593..142267 | - | 675 | WP_046891833.1 | IS66 family transposase ISSfl3 | Transposase |
| C5B81_RS26390 | 142486..142617 | + | 132 | Protein_171 | ATP-binding protein | - |
| C5B81_RS25240 | 142624..144215 | - | 1592 | Protein_172 | IS66 family transposase ISEc43 | Transposase |
| C5B81_RS25245 | 144246..144596 | - | 351 | WP_000624671.1 | IS66 family transposase IS682 | Transposase |
| C5B81_RS25250 | 144593..144949 | - | 357 | WP_000239757.1 | IS66 family transposase IS682 | Transposase |
| C5B81_RS27055 | 145101..145202 | + | 102 | Protein_175 | ATP-binding protein | - |
| C5B81_RS25255 | 145284..145493 | - | 210 | Protein_176 | peptidoglycan-binding protein | - |
| C5B81_RS25260 | 145543..145794 | - | 252 | WP_000433928.1 | transporter | - |
| C5B81_RS25270 | 146246..146530 | + | 285 | WP_001178088.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C5B81_RS25275 | 146530..146805 | + | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C5B81_RS26395 | 146937..147074 | - | 138 | WP_000766699.1 | hypothetical protein | - |
| C5B81_RS27060 | 147350..147532 | - | 183 | WP_241547534.1 | plasmid partitioning/stability family protein | - |
| C5B81_RS25285 | 147535..148101 | - | 567 | Protein_182 | plasmid segregation protein ParM | - |
| C5B81_RS25295 | 148109..149200 | + | 1092 | Protein_183 | IS66 family transposase ISEc49 | Transposase |
| C5B81_RS25300 | 149395..150525 | - | 1131 | WP_050546159.1 | IS91 family transposase ISSbo1 | Transposase |
| C5B81_RS25315 | 151896..152168 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| C5B81_RS25330 | 154097..154315 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C5B81_RS25335 | 154317..154622 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C5B81_RS25340 | 154646..154753 | + | 108 | WP_023592908.1 | transposase domain-containing protein | - |
| C5B81_RS25345 | 155015..156652 | + | 1638 | WP_134801162.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C5B81_RS25350 | 156860..157129 | + | 270 | WP_000079956.1 | type II toxin-antitoxin system antitoxin YacA | - |
| C5B81_RS27065 | 157129..157298 | + | 170 | Protein_193 | type II toxin-antitoxin system toxin YacB | - |
| C5B81_RS25360 | 157381..157863 | + | 483 | Protein_194 | Protein kinase OspG | VF |
| C5B81_RS25365 | 157881..158577 | - | 697 | Protein_195 | IS1 family transposase IS1X2 | Transposase |
| C5B81_RS27070 | 158629..158781 | - | 153 | Protein_196 | hypothetical protein | - |
| C5B81_RS26400 | 158747..158899 | + | 153 | WP_171763767.1 | hypothetical protein | - |
| C5B81_RS25370 | 159263..160105 | + | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| C5B81_RS25375 | 160108..161196 | + | 1089 | WP_005027207.1 | putative hexosyltransferase CapU | - |
| C5B81_RS25380 | 161201..162151 | + | 951 | WP_005045525.1 | virulence factor VirK | - |
| C5B81_RS25385 | 162216..163160 | + | 945 | WP_005027201.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| C5B81_RS25390 | 163314..163985 | - | 672 | Protein_202 | IS630 family transposase IS630 | Transposase |
| C5B81_RS25405 | 164946..167135 | + | 2190 | WP_119178493.1 | type IV conjugative transfer system coupling protein TraD | - |
| C5B81_RS25410 | 167144..167542 | - | 399 | WP_000911318.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C5B81_RS25415 | 167542..167769 | - | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|