MGE detailed information
MGE type: IScluster/Tn MGE length: 35168 bp
Accession: NZ_CP026830 Location: 2925..38092 Organism: Shigella dysenteriae strain ATCC 12039 Replicon: plasmid unnamed
Accession: NZ_CP026830 Location: 2925..38092 Organism: Shigella dysenteriae strain ATCC 12039 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P71_RS00010 (1837) | 1837..2016 | + | 180 | Protein_1 | transposase | - |
| C1P71_RS00015 (2033) | 2033..2731 | - | 699 | Protein_2 | IS1 family transposase | - |
| C1P71_RS26615 (2810) | 2810..2902 | + | 93 | Protein_3 | hypothetical protein | - |
| C1P71_RS00025 (2925) | 2925..3956 | - | 1032 | Protein_4 | IS630 family transposase | - |
| C1P71_RS00040 (5174) | 5174..5646 | - | 473 | Protein_6 | AraC family transcriptional regulator | - |
| C1P71_RS00045 (5895) | 5895..7091 | + | 1197 | WP_000140459.1 | IS110-like element ISEc20 family transposase | - |
| C1P71_RS26335 (7086) | 7086..7508 | - | 423 | Protein_8 | hypothetical protein | - |
| C1P71_RS00055 (9072) | 9072..9709 | - | 638 | Protein_10 | ParB N-terminal domain-containing protein | - |
| C1P71_RS00060 (9694) | 9694..10518 | - | 825 | Protein_11 | DUF3440 domain-containing protein | - |
| C1P71_RS00070 (10587) | 10587..11738 | + | 1152 | WP_001254927.1 | IS30-like element IS30 family transposase | - |
| C1P71_RS00075 (11745) | 11745..12641 | + | 897 | Protein_13 | IS3-like element IS600 family transposase | - |
| C1P71_RS26620 (12688) | 12688..12798 | + | 111 | Protein_14 | hypothetical protein | - |
| C1P71_RS00085 (12805) | 12805..13956 | - | 1152 | WP_001254927.1 | IS30-like element IS30 family transposase | - |
| C1P71_RS26625 (13953) | 13953..14039 | - | 87 | Protein_16 | hypothetical protein | - |
| C1P71_RS00090 (14021) | 14021..14281 | - | 261 | Protein_17 | transposase | - |
| C1P71_RS00095 (14345) | 14345..14479 | + | 135 | Protein_18 | transposase domain-containing protein | - |
| C1P71_RS26340 (14733) | 14733..14897 | - | 165 | WP_001346193.1 | hypothetical protein | - |
| C1P71_RS00115 (15799) | 15799..16083 | + | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C1P71_RS00120 (16071) | 16071..16556 | + | 486 | WP_128879667.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C1P71_RS00125 (16906) | 16906..17750 | + | 845 | WP_094096542.1 | IS5-like element ISSfl7 family transposase | - |
| C1P71_RS00130 (17761) | 17761..18012 | + | 252 | Protein_23 | IS3 family transposase | - |
| C1P71_RS00135 (18087) | 18087..18656 | - | 570 | Protein_24 | Tn3 family transposase | - |
| C1P71_RS00140 (18756) | 18756..19984 | + | 1229 | WP_171766245.1 | IS3-like element IS2 family transposase | - |
| C1P71_RS26630 (19909) | 19909..21525 | - | 1617 | WP_284514258.1 | Tn3 family transposase | - |
| C1P71_RS26635 (21503) | 21503..22387 | - | 885 | WP_284514260.1 | DUF4158 domain-containing protein | - |
| C1P71_RS00150 (22413) | 22413..23036 | - | 624 | WP_023308204.1 | recombinase family protein | - |
| C1P71_RS26345 (23186) | 23186..23395 | + | 210 | Protein_29 | DDE-type integrase/transposase/recombinase | - |
| C1P71_RS00160 (23442) | 23442..24651 | - | 1210 | Protein_30 | IS3 family transposase | - |
| C1P71_RS00165 (24717) | 24717..24884 | - | 168 | Protein_31 | transposase | - |
| C1P71_RS00170 (24925) | 24925..25266 | - | 342 | Protein_32 | transposase DNA-binding-containing protein | - |
| C1P71_RS00175 (25245) | 25245..25355 | - | 111 | Protein_33 | transposase | - |
| C1P71_RS26205 (25430) | 25430..25687 | + | 258 | Protein_34 | transposase | - |
| C1P71_RS00180 (25755) | 25755..26906 | + | 1152 | WP_141095823.1 | IS30-like element IS30 family transposase | - |
| C1P71_RS00185 (26916) | 26916..27176 | - | 261 | Protein_36 | transposase | - |
| C1P71_RS00190 (27244) | 27244..27726 | - | 483 | WP_000405248.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C1P71_RS00195 (27717) | 27717..28019 | - | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C1P71_RS00200 (28433) | 28433..29149 | - | 717 | Protein_39 | IS21-like element IS100kyp family helper ATPase IstB | - |
| C1P71_RS00210 (29347) | 29347..30556 | + | 1210 | Protein_40 | IS3 family transposase | - |
| C1P71_RS00220 (30797) | 30797..31641 | + | 845 | WP_128879669.1 | IS5-like element ISSfl7 family transposase | - |
| C1P71_RS00230 (31790) | 31790..33244 | - | 1455 | WP_128879670.1 | type 3 secretion system effector OspC2 | - |
| C1P71_RS00235 (33669) | 33669..34513 | + | 845 | WP_128879669.1 | IS5-like element ISSfl7 family transposase | - |
| C1P71_RS26640 (34608) | 34608..34685 | + | 78 | Protein_44 | hypothetical protein | - |
| C1P71_RS00240 (34758) | 34758..35039 | - | 282 | Protein_45 | transposase domain-containing protein | - |
| C1P71_RS00245 (35094) | 35094..36303 | + | 1210 | Protein_46 | IS3 family transposase | - |
| C1P71_RS00250 (36346) | 36346..36609 | - | 264 | Protein_47 | IS3 family transposase | - |
| C1P71_RS26645 (36603) | 36603..36674 | + | 72 | Protein_48 | hypothetical protein | - |
| C1P71_RS00255 (36671) | 36671..37822 | + | 1152 | WP_128879671.1 | IS30-like element IS30 family transposase | - |
| C1P71_RS00260 (37832) | 37832..38092 | - | 261 | Protein_50 | transposase | - |
| C1P71_RS00265 (38154) | 38154..38426 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| C1P71_RS00275 (38787) | 38787..42880 | + | 4094 | Protein_52 | serine protease autotransporter toxin SepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|