MGE detailed information
MGE type: IScluster/Tn MGE length: 44088 bp
Accession: NZ_CP026829 Location: 117721..161808 Organism: Shigella dysenteriae strain ATCC 12037 Replicon: plasmid unnamed
Accession: NZ_CP026829 Location: 117721..161808 Organism: Shigella dysenteriae strain ATCC 12037 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P70_RS25315 | 116851..117078 | + | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| C1P70_RS25320 | 117078..117476 | + | 399 | WP_000911318.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C1P70_RS25325 | 117485..117709 | - | 225 | Protein_148 | conjugal transfer protein TraD | - |
| C1P70_RS25335 | 119040..121073 | - | 2034 | Protein_150 | type IV conjugative transfer system coupling protein TraD | - |
| C1P70_RS25340 | 121321..122018 | + | 698 | WP_252988940.1 | IS1 family transposase IS1X2 | Transposase |
| C1P70_RS25345 | 122034..122705 | + | 672 | Protein_152 | IS630 family transposase IS630 | Transposase |
| C1P70_RS25350 | 122859..123803 | - | 945 | WP_005027201.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| C1P70_RS25355 | 123868..124818 | - | 951 | WP_012449328.1 | virulence factor VirK | - |
| C1P70_RS25360 | 124823..125911 | - | 1089 | WP_005027207.1 | putative hexosyltransferase CapU | - |
| C1P70_RS25365 | 125914..126756 | - | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| C1P70_RS26985 | 127239..127391 | + | 153 | Protein_157 | hypothetical protein | - |
| C1P70_RS25375 | 127443..128139 | + | 697 | Protein_158 | IS1 family transposase IS1X2 | Transposase |
| C1P70_RS25380 | 128157..128640 | - | 484 | Protein_159 | Protein kinase OspG | VF |
| C1P70_RS26990 | 128723..128892 | - | 170 | Protein_160 | type II toxin-antitoxin system toxin YacB | - |
| C1P70_RS25390 | 128892..129161 | - | 270 | WP_000079956.1 | type II toxin-antitoxin system antitoxin YacA | - |
| C1P70_RS25395 | 129369..131006 | - | 1638 | WP_129593020.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C1P70_RS25400 | 131268..131375 | - | 108 | WP_023592908.1 | transposase domain-containing protein | - |
| C1P70_RS25405 | 131399..131704 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C1P70_RS25410 | 131706..131924 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C1P70_RS25420 | 132517..132789 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| C1P70_RS25425 | 132884..134097 | + | 1214 | Protein_167 | IS3 family transposase IS629 | Transposase |
| C1P70_RS25435 | 134161..135291 | + | 1131 | WP_050546159.1 | IS91 family transposase ISSbo1 | Transposase |
| C1P70_RS25440 | 135486..136577 | - | 1092 | Protein_169 | IS66 family transposase ISEc49 | Transposase |
| C1P70_RS25445 | 136585..137152 | + | 568 | Protein_170 | plasmid segregation protein ParM | - |
| C1P70_RS26995 | 137155..137346 | + | 192 | WP_252988941.1 | plasmid partitioning/stability family protein | - |
| C1P70_RS26410 | 137614..137751 | + | 138 | WP_000766699.1 | hypothetical protein | - |
| C1P70_RS25455 | 137883..138158 | - | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P70_RS25460 | 138158..138442 | - | 285 | WP_001178088.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C1P70_RS25470 | 138894..139145 | + | 252 | WP_000433928.1 | transporter | - |
| C1P70_RS25475 | 139195..139404 | + | 210 | Protein_176 | peptidoglycan-binding protein | - |
| C1P70_RS27000 | 139486..139587 | - | 102 | Protein_177 | ATP-binding protein | - |
| C1P70_RS25480 | 139739..140095 | + | 357 | WP_000239757.1 | IS66 family transposase IS682 | Transposase |
| C1P70_RS25485 | 140092..140442 | + | 351 | WP_134801370.1 | IS66 family transposase ISEc47 | Transposase |
| C1P70_RS25490 | 140473..142065 | + | 1593 | WP_001072392.1 | IS66 family transposase ISEc43 | Transposase |
| C1P70_RS25500 | 142358..143485 | - | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C1P70_RS25510 | 143616..143723 | - | 108 | Protein_182 | ATP-binding protein | - |
| C1P70_RS25520 | 143942..144616 | + | 675 | WP_046891833.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P70_RS25525 | 144613..144777 | + | 165 | Protein_184 | IS66 family transposase ISSfl3 | Transposase |
| C1P70_RS25530 | 144926..145087 | + | 162 | Protein_185 | IS110 family transposase ISEc11 | Transposase |
| C1P70_RS25535 | 145160..146328 | + | 1169 | WP_094096743.1 | IS3 family transposase ISLad1 | Transposase |
| C1P70_RS25555 | 147347..148306 | + | 960 | WP_046891834.1 | plasmid segregation protein ParM | - |
| C1P70_RS25560 | 148306..148701 | + | 396 | WP_000445931.1 | plasmid partitioning/stability family protein | - |
| C1P70_RS25570 | 150190..150351 | + | 162 | Protein_190 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| C1P70_RS25585 | 151481..151696 | + | 216 | Protein_192 | IS3 family transposase IS600 | Transposase |
| C1P70_RS27005 | 151869..152114 | + | 246 | Protein_193 | reverse transcriptase domain-containing protein | - |
| C1P70_RS25595 | 152170..153383 | + | 1214 | WP_171764163.1 | IS3 family transposase IS629 | Transposase |
| C1P70_RS25600 | 153427..153549 | - | 123 | Protein_195 | IS1 family transposase | - |
| C1P70_RS25610 | 153722..153892 | + | 171 | Protein_196 | transposase | - |
| C1P70_RS25615 | 153903..155276 | - | 1374 | Protein_197 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| C1P70_RS25620 | 155337..156493 | + | 1157 | WP_094096518.1 | IS3 family transposase IS600 | Transposase |
| C1P70_RS25625 | 156534..157337 | + | 804 | Protein_199 | IS3 family transposase | - |
| C1P70_RS27010 | 157452..157793 | + | 342 | Protein_200 | IS4 family transposase ISEc13 | Transposase |
| C1P70_RS25630 | 157776..158613 | + | 838 | Protein_201 | IS4 family transposase ISEc13 | Transposase |
| C1P70_RS25635 | 158663..159859 | - | 1197 | WP_005025039.1 | IS110 family transposase ISEc20 | Transposase |
| C1P70_RS25640 | 160051..161055 | - | 1005 | WP_134807351.1 | IS21 family transposase IS100kyp | Transposase |
| C1P70_RS27015 | 161402..162211 | + | 810 | Protein_204 | IS110 family transposase | - |
| C1P70_RS25650 | 162408..163187 | + | 780 | WP_046891860.1 | type III secretion system effector cysteine protease IpaJ | - |
| C1P70_RS25655 | 164133..165062 | - | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| C1P70_RS25660 | 165279..165515 | - | 237 | WP_000588812.1 | phosphopantetheine-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|