MGE detailed information
MGE type: IScluster/Tn MGE length: 15356 bp
Accession: NZ_CP026813 Location: 742..16097 Organism: Shigella boydii strain 83-578 Replicon: plasmid unnamed
Accession: NZ_CP026813 Location: 742..16097 Organism: Shigella boydii strain 83-578 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P60_RS00005 () | 2..367 | + | 366 | WP_073691780.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| C1P60_RS00010 () | 413..1257 | + | 845 | Protein_1 | IS5 family transposase ISSfl7 | Transposase |
| C1P60_RS00015 () | 1429..2178 | - | 750 | WP_000828661.1 | phosphatase PAP2 family protein | - |
| C1P60_RS00025 () | 2541..2756 | + | 216 | Protein_3 | IS3 family transposase IS600 | Transposase |
| C1P60_RS25435 () | 3039..3482 | + | 444 | WP_201797260.1 | hypothetical protein | - |
| C1P60_RS00035 () | 3534..4747 | + | 1214 | WP_167692677.1 | IS3 family transposase IS629 | Transposase |
| C1P60_RS00040 () | 4823..5095 | - | 273 | WP_012421738.1 | hypothetical protein | - |
| C1P60_RS00050 () | 5688..5906 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C1P60_RS00055 () | 5908..6213 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C1P60_RS00060 () | 6249..6344 | + | 96 | Protein_9 | transposase domain-containing protein | - |
| C1P60_RS00065 () | 6606..8243 | + | 1638 | WP_012421769.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C1P60_RS00070 () | 8451..8720 | + | 270 | WP_000079956.1 | hypothetical protein | - |
| C1P60_RS25440 () | 8717..8943 | + | 227 | Protein_12 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C1P60_RS00080 () | 8972..9457 | + | 486 | WP_039058926.1 | Protein kinase OspG | VF |
| C1P60_RS00085 () | 9472..10169 | - | 698 | Protein_14 | IS1 family transposase IS1X2 | Transposase |
| C1P60_RS25195 () | 10339..10491 | + | 153 | WP_171765824.1 | hypothetical protein | - |
| C1P60_RS00090 () | 10855..11697 | + | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| C1P60_RS00095 () | 11700..12788 | + | 1089 | WP_005027207.1 | putative hexosyltransferase CapU | - |
| C1P60_RS00100 () | 12793..13743 | + | 951 | WP_012421771.1 | virulence factor VirK | - |
| C1P60_RS00105 () | 13808..14752 | + | 945 | WP_012421740.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| C1P60_RS00110 () | 14907..15578 | - | 672 | Protein_20 | IS630 family transposase IS630 | Transposase |
| C1P60_RS00115 () | 15594..16291 | - | 698 | Protein_21 | IS1 family transposase IS1X2 | Transposase |
| C1P60_RS00125 () | 16539..18727 | + | 2189 | Protein_22 | type IV conjugative transfer system coupling protein TraD | - |
| C1P60_RS00130 () | 18736..19134 | - | 399 | WP_000911319.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| C1P60_RS00135 () | 19134..19361 | - | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| C1P60_RS00140 () | 19565..19858 | + | 294 | WP_171548087.1 | relaxase domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|