MGE detailed information
MGE type: IScluster/Tn MGE length: 25708 bp
Accession: NZ_CP026812 Location: 128433..154140 Organism: Shigella flexneri strain 64-5500 Replicon: plasmid unnamed
Accession: NZ_CP026812 Location: 128433..154140 Organism: Shigella flexneri strain 64-5500 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P83_RS25140 | 124493..127798 | + | 3306 | Protein_154 | outer membrane autotransporter IcsA | - |
| C1P83_RS25145 | 127942..128260 | + | 319 | Protein_155 | fimbria/pilus outer membrane usher protein | - |
| C1P83_RS25150 | 128433..129645 | + | 1213 | Protein_156 | IS3 family transposase IS629 | Transposase |
| C1P83_RS25155 | 130019..131638 | + | 1620 | WP_232970571.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| C1P83_RS25160 | 131649..131819 | - | 171 | Protein_158 | transposase | - |
| C1P83_RS25170 | 131992..132689 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| C1P83_RS25175 | 132729..132848 | - | 120 | Protein_160 | transposase domain-containing protein | - |
| C1P83_RS25185 | 133074..134666 | - | 1593 | WP_001072385.1 | IS66 family transposase ISEc43 | Transposase |
| C1P83_RS25190 | 134697..135047 | - | 351 | WP_000624671.1 | IS66 family transposase IS682 | Transposase |
| C1P83_RS25195 | 135044..135367 | - | 324 | WP_226342183.1 | IS66 family transposase IS682 | Transposase |
| C1P83_RS25200 | 135427..135881 | + | 455 | Protein_164 | IS3 family transposase IS911 | Transposase |
| C1P83_RS25210 | 137239..137346 | + | 108 | Protein_166 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P83_RS25215 | 137343..137693 | + | 351 | WP_000624671.1 | IS66 family transposase IS682 | Transposase |
| C1P83_RS25220 | 137724..139316 | + | 1593 | WP_001072392.1 | IS66 family transposase ISEc43 | Transposase |
| C1P83_RS25225 | 139347..139859 | + | 513 | Protein_169 | IS630 family transposase IS630 | Transposase |
| C1P83_RS25230 | 140013..140957 | - | 945 | WP_005027201.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| C1P83_RS25235 | 141022..141972 | - | 951 | WP_005059240.1 | virulence factor VirK | - |
| C1P83_RS25240 | 141977..143065 | - | 1089 | WP_005059238.1 | putative hexosyltransferase CapU | - |
| C1P83_RS25245 | 143068..143910 | - | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| C1P83_RS25915 | 144274..144426 | - | 153 | WP_171763767.1 | hypothetical protein | - |
| C1P83_RS26515 | 144392..144544 | + | 153 | Protein_175 | hypothetical protein | - |
| C1P83_RS25250 | 144596..145293 | + | 698 | WP_226342160.1 | IS1 family transposase IS1X2 | Transposase |
| C1P83_RS26520 | 145357..145526 | - | 170 | Protein_177 | type II toxin-antitoxin system toxin YacB | - |
| C1P83_RS25260 | 145526..145795 | - | 270 | WP_000079956.1 | type II toxin-antitoxin system antitoxin YacA | - |
| C1P83_RS25265 | 146003..147640 | - | 1638 | WP_032490759.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C1P83_RS25275 | 148033..148338 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C1P83_RS25280 | 148340..148558 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C1P83_RS26525 | 149151..149234 | + | 84 | Protein_182 | hypothetical protein | - |
| C1P83_RS25290 | 149243..149959 | - | 717 | Protein_183 | IS3 family transposase ISLad1 | Transposase |
| C1P83_RS25295 | 150014..150945 | + | 932 | Protein_184 | IS3 family transposase IS629 | Transposase |
| C1P83_RS25300 | 150979..152571 | - | 1593 | WP_001072385.1 | IS66 family transposase ISEc43 | Transposase |
| C1P83_RS25305 | 152602..152952 | - | 351 | WP_000624671.1 | IS66 family transposase IS682 | Transposase |
| C1P83_RS25310 | 152949..153305 | - | 357 | WP_005054686.1 | IS66 family transposase IS682 | Transposase |
| C1P83_RS25315 | 153457..153621 | - | 165 | Protein_188 | IS630 family transposase | - |
| C1P83_RS25325 | 154390..154863 | + | 474 | Protein_190 | conjugal transfer protein TraD | - |
| C1P83_RS25330 | 154872..155270 | - | 399 | WP_000911318.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C1P83_RS25335 | 155270..155497 | - | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|