MGE detailed information
MGE type: IScluster/Tn MGE length: 35734 bp
Accession: NZ_CP026809 Location: 5799..41532 Organism: Shigella dysenteriae strain 204/96 Replicon: plasmid unnamed2
Accession: NZ_CP026809 Location: 5799..41532 Organism: Shigella dysenteriae strain 204/96 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P75_RS25825 | 1856..5164 | + | 3309 | WP_069375727.1 | outer membrane autotransporter IcsA | - |
| C1P75_RS25830 | 5308..5626 | + | 319 | Protein_2 | fimbria/pilus outer membrane usher protein | - |
| C1P75_RS25835 | 5799..7012 | + | 1214 | WP_171769625.1 | IS3 family transposase | - |
| C1P75_RS25840 | 7353..9005 | + | 1653 | WP_046891837.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| C1P75_RS25845 | 9016..9186 | - | 171 | Protein_5 | transposase | - |
| C1P75_RS25855 | 9359..9517 | + | 159 | Protein_6 | IS1 family transposase | - |
| C1P75_RS25860 | 9648..10775 | + | 1128 | WP_001063816.1 | IS110-like element ISSso6 family transposase | - |
| C1P75_RS25865 | 11130..11510 | + | 381 | WP_001333468.1 | transposase | - |
| C1P75_RS25870 | 11507..11854 | + | 348 | WP_000612610.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P75_RS25875 | 11903..13441 | + | 1539 | WP_000099181.1 | IS66-like element ISEc22 family transposase | - |
| C1P75_RS25880 | 13480..13602 | + | 123 | Protein_11 | IS1 family transposase | - |
| C1P75_RS25885 | 13642..13761 | - | 120 | Protein_12 | transposase domain-containing protein | - |
| C1P75_RS25890 | 13835..14125 | - | 291 | Protein_13 | group II intron maturase-specific domain-containing protein | - |
| C1P75_RS25900 | 15431..16644 | + | 1214 | WP_167544920.1 | IS3 family transposase | - |
| C1P75_RS25910 | 16708..17838 | + | 1131 | WP_050546159.1 | IS91 family transposase | - |
| C1P75_RS25915 | 18033..19124 | - | 1092 | Protein_17 | IS66 family transposase | - |
| C1P75_RS25920 | 19132..19699 | + | 568 | Protein_18 | plasmid segregation protein ParM | - |
| C1P75_RS28110 | 19702..19884 | + | 183 | WP_241547534.1 | plasmid partitioning/stability family protein | - |
| C1P75_RS28115 | 20160..20297 | + | 138 | WP_000766699.1 | hypothetical protein | - |
| C1P75_RS25930 | 20429..20704 | - | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P75_RS25935 | 20704..20988 | - | 285 | WP_001178088.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C1P75_RS25945 | 21440..21691 | + | 252 | WP_000433928.1 | transporter | - |
| C1P75_RS25950 | 21741..21950 | + | 210 | Protein_24 | peptidoglycan-binding protein | - |
| C1P75_RS28120 | 22032..22133 | - | 102 | Protein_25 | ATP-binding protein | - |
| C1P75_RS25955 | 22285..22641 | + | 357 | WP_005041107.1 | transposase | - |
| C1P75_RS25960 | 22638..22988 | + | 351 | WP_000624671.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P75_RS25965 | 23019..24611 | + | 1593 | WP_001072392.1 | IS66 family transposase | - |
| C1P75_RS25975 | 24904..26031 | - | 1128 | WP_001063816.1 | IS110-like element ISSso6 family transposase | - |
| C1P75_RS25985 | 26162..26269 | - | 108 | Protein_30 | ATP-binding protein | - |
| C1P75_RS25995 | 26488..27162 | + | 675 | WP_046891833.1 | IS66-like element accessory protein TnpA | - |
| C1P75_RS26000 | 27159..27323 | + | 165 | Protein_32 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P75_RS26005 | 27472..27633 | + | 162 | Protein_33 | IS110 family transposase | - |
| C1P75_RS26010 | 27706..28874 | + | 1169 | WP_094112608.1 | IS3 family transposase | - |
| C1P75_RS26015 | 28923..29195 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| C1P75_RS26030 | 31124..31342 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C1P75_RS26035 | 31344..31649 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C1P75_RS26040 | 31673..31780 | + | 108 | WP_023592908.1 | transposase domain-containing protein | - |
| C1P75_RS26045 | 32042..33679 | + | 1638 | WP_000936802.1 | T3SS effector E3 ubiquitin-protein ligase IpaH9.8 | - |
| C1P75_RS26050 | 33887..34156 | + | 270 | WP_000079956.1 | type II toxin-antitoxin system antitoxin YacA | - |
| C1P75_RS28125 | 34156..34325 | + | 170 | Protein_42 | type II toxin-antitoxin system toxin YacB | - |
| C1P75_RS26060 | 34408..34890 | + | 483 | Protein_43 | type III secretion system effector protein kinase OspG | - |
| C1P75_RS26065 | 34908..35604 | - | 697 | Protein_44 | IS1 family transposase | - |
| C1P75_RS28130 | 35656..35808 | - | 153 | Protein_45 | hypothetical protein | - |
| C1P75_RS26075 | 36291..37133 | + | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| C1P75_RS26080 | 37136..38224 | + | 1089 | WP_005027207.1 | putative hexosyltransferase CapU | - |
| C1P75_RS26085 | 38229..39179 | + | 951 | WP_005045525.1 | virulence factor VirK | - |
| C1P75_RS26090 | 39244..40188 | + | 945 | WP_005027201.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| C1P75_RS26095 | 40342..41013 | - | 672 | Protein_50 | IS630 family transposase | - |
| C1P75_RS26110 | 41974..44154 | + | 2181 | WP_069661558.1 | type IV conjugative transfer system coupling protein TraD | - |
| C1P75_RS26115 | 44163..44561 | - | 399 | WP_000911318.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C1P75_RS26120 | 44561..44788 | - | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|