MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 245004 bp
Accession: NZ_CP026804 Location: 1..245004 Organism: Shigella flexneri strain 89-141 Replicon: plasmid unnamed1
Accession: NZ_CP026804 Location: 1..245004 Organism: Shigella flexneri strain 89-141 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P88_RS23120 | 1..458 | - | 458 | Protein_0 | Surface presentation of antigens protein SpaP | VF |
| C1P88_RS23125 | 463..1344 | - | 882 | WP_134799741.1 | Surface presentation of antigens protein SpaO | VF |
| C1P88_RS23130 | 1338..2216 | - | 879 | WP_001162455.1 | Surface presentation of antigens protein SpaN | VF |
| C1P88_RS23135 | 2185..2541 | - | 357 | WP_024260642.1 | hypothetical protein | VF |
| C1P88_RS23140 | 2634..3926 | - | 1293 | WP_000122616.1 | putative ATP synthase SpaL/MxiB | VF |
| C1P88_RS23145 | 3930..4331 | - | 402 | WP_000065501.1 | Surface presentation of antigens protein SpaK | VF |
| C1P88_RS23150 | 4344..6406 | - | 2063 | Protein_6 | type III secretion system export apparatus protein MxiA | - |
| C1P88_RS23155 | 6419..7485 | - | 1067 | Protein_7 | Protein MxiC | VF |
| C1P88_RS23160 | 7504..9206 | - | 1703 | Protein_8 | Outer membrane protein MxiD | VF |
| C1P88_RS23165 | 9193..9825 | - | 633 | WP_000398259.1 | Invasion protein InvF | VF |
| C1P88_RS23170 | 9955..10383 | - | 429 | WP_001346200.1 | Lipoprotein MxiM | VF |
| C1P88_RS23175 | 10367..10774 | - | 408 | WP_000609862.1 | hypothetical protein | VF |
| C1P88_RS23180 | 10767..11462 | - | 696 | WP_010921671.1 | Oxygen-regulated invasion protein OrgB | VF |
| C1P88_RS23185 | 11404..11931 | - | 528 | WP_000620627.1 | Oxygen-regulated invasion protein OrgA | VF |
| C1P88_RS23190 | 11928..12653 | - | 726 | WP_000621942.1 | Lipoprotein PrgK | VF |
| C1P88_RS23195 | 12659..12952 | - | 294 | WP_001106823.1 | hypothetical protein | VF |
| C1P88_RS23200 | 12965..13216 | - | 252 | WP_044141262.1 | Protein MxiH | VF |
| C1P88_RS23205 | 13224..14339 | - | 1116 | WP_134799742.1 | Protein MxiG | VF |
| C1P88_RS23210 | 14348..14806 | - | 459 | WP_000086109.1 | hypothetical protein | VF |
| C1P88_RS23215 | 14806..15168 | - | 363 | WP_000389732.1 | Chaperone protein IpgE | VF |
| C1P88_RS23220 | 15178..16794 | - | 1617 | WP_134799743.1 | Inositol phosphate phosphatase IpgD | VF |
| C1P88_RS23230 | 17108..18592 | + | 1485 | WP_134799744.1 | hypothetical protein | VF |
| C1P88_RS23235 | 18605..18994 | + | 390 | WP_010921664.1 | hypothetical protein | VF |
| C1P88_RS23240 | 19010..19636 | + | 627 | WP_134799745.1 | hypothetical protein | VF |
| C1P88_RS23245 | 19693..20160 | + | 468 | WP_000055835.1 | Chaperone protein IpgC | VF |
| C1P88_RS23250 | 20166..21908 | + | 1743 | WP_134799746.1 | Invasin IpaB | VF |
| C1P88_RS23255 | 21928..23019 | + | 1092 | WP_000405475.1 | Invasin IpaC | VF |
| C1P88_RS23260 | 23070..24068 | + | 999 | WP_001028026.1 | Invasin IpaD | VF |
| C1P88_RS23265 | 24077..25978 | + | 1902 | WP_134799747.1 | Invasin IpaA | VF |
| C1P88_RS23270 | 25982..26218 | + | 237 | WP_000588812.1 | Acyl carrier protein | VF |
| C1P88_RS23275 | 26435..27364 | + | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| C1P88_RS23280 | 28309..29088 | - | 780 | WP_005059304.1 | Cysteine protease IpaJ | VF |
| C1P88_RS25675 | 29285..30094 | - | 810 | Protein_32 | IS110 family transposase | - |
| C1P88_RS23290 | 30441..31445 | + | 1005 | WP_000255971.1 | IS21 family transposase IS100kyp | Transposase |
| C1P88_RS23295 | 31637..32833 | + | 1197 | WP_134799749.1 | IS110 family transposase ISSfl4 | Transposase |
| C1P88_RS25680 | 32883..33716 | - | 834 | Protein_35 | IS21 family transposase ISEc62 | Transposase |
| C1P88_RS25105 | 33699..34040 | - | 342 | Protein_36 | IS21 family transposase ISEc62 | Transposase |
| C1P88_RS23305 | 34155..34958 | - | 804 | Protein_37 | IS3 family transposase ISKpn38 | Transposase |
| C1P88_RS23320 | 36493..37947 | - | 1455 | WP_134799752.1 | hypothetical protein | VF |
| C1P88_RS23325 | 38519..39193 | + | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P88_RS23330 | 39190..39537 | + | 348 | WP_000631715.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P88_RS23335 | 39557..41158 | + | 1602 | WP_005067462.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P88_RS25110 | 41412..41576 | - | 165 | WP_044138991.1 | hypothetical protein | - |
| C1P88_RS23360 | 42478..42762 | + | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C1P88_RS23365 | 42750..43235 | + | 486 | WP_000501970.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C1P88_RS23370 | 43286..43983 | + | 698 | WP_223368647.1 | IS1 family transposase IS1X2 | Transposase |
| C1P88_RS23375 | 44185..44505 | - | 321 | Protein_47 | IS4 family transposase ISSfl1 | Transposase |
| C1P88_RS23380 | 44568..45724 | + | 1157 | WP_094184887.1 | IS3 family transposase ISSd1 | Transposase |
| C1P88_RS23385 | 45770..46090 | + | 321 | Protein_49 | ParB/RepB/Spo0J family partition protein | - |
| C1P88_RS23390 | 46318..46710 | + | 393 | Protein_50 | hypothetical protein | - |
| C1P88_RS23395 | 46729..47202 | + | 474 | WP_005038443.1 | AraC family transcriptional regulator | - |
| C1P88_RS23400 | 47291..48156 | + | 866 | WP_086020993.1 | IS5 family transposase ISSfl7 | Transposase |
| C1P88_RS23405 | 48406..48600 | + | 195 | Protein_53 | HNH endonuclease | - |
| C1P88_RS23410 | 48743..48964 | + | 222 | Protein_54 | IS66 family transposase ISCro1 | Transposase |
| C1P88_RS23415 | 48985..49047 | - | 63 | Protein_55 | IS66 family transposase ISCro1 | Transposase |
| C1P88_RS23420 | 49497..50909 | + | 1413 | WP_134799753.1 | hypothetical protein | VF |
| C1P88_RS23425 | 51013..51162 | - | 150 | Protein_57 | IS1 family transposase | - |
| C1P88_RS23430 | 51238..52935 | + | 1698 | WP_001343187.1 | hypothetical protein | VF |
| C1P88_RS23440 | 53052..53171 | + | 120 | Protein_59 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P88_RS23450 | 53338..53610 | + | 273 | WP_000019164.1 | hypothetical protein | - |
| C1P88_RS23455 | 53591..54799 | + | 1209 | WP_134799754.1 | IS91 family transposase ISSbo1 | Transposase |
| C1P88_RS23460 | 55175..55909 | - | 735 | Protein_62 | IS21 family transposase IS100kyp | Transposase |
| C1P88_RS23470 | 56066..57274 | - | 1209 | Protein_63 | IS3 family transposase | - |
| C1P88_RS23475 | 57326..59050 | - | 1725 | WP_134799755.1 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| C1P88_RS23480 | 59478..61208 | - | 1731 | WP_134799756.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C1P88_RS23485 | 61596..61862 | - | 267 | WP_000957712.1 | hypothetical protein | VF |
| C1P88_RS25685 | 61971..62101 | - | 131 | Protein_67 | IS1 family transposase | - |
| C1P88_RS25690 | 62099..62182 | + | 84 | Protein_68 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P88_RS23495 | 62701..63224 | + | 524 | Protein_69 | IS3 family transposase ISSfl11 | Transposase |
| C1P88_RS23500 | 63267..64475 | - | 1209 | Protein_70 | IS3 family transposase | - |
| C1P88_RS23505 | 64532..64828 | - | 297 | Protein_71 | DDE-type integrase/transposase/recombinase | - |
| C1P88_RS23510 | 64944..65132 | + | 189 | WP_000956787.1 | hypothetical protein | - |
| C1P88_RS23515 | 65142..66341 | + | 1200 | WP_134799757.1 | IS91 family transposase ISSbo1 | Transposase |
| C1P88_RS23520 | 66514..67268 | - | 755 | Protein_74 | IS3 family transposase IS150 | Transposase |
| C1P88_RS23525 | 67279..67638 | + | 360 | Protein_75 | IS21 family transposase IS100 | Transposase |
| C1P88_RS23530 | 67631..68419 | - | 789 | WP_134799758.1 | AraC family invasion system transcriptional regulator VirF | - |
| C1P88_RS23535 | 68848..69249 | + | 402 | Protein_77 | IS3 family transposase ISEc48 | Transposase |
| C1P88_RS23540 | 69431..69697 | + | 267 | WP_000957712.1 | hypothetical protein | VF |
| C1P88_RS23545 | 70068..71264 | - | 1197 | WP_134799759.1 | IS110 family transposase ISSfl4 | Transposase |
| C1P88_RS23550 | 71600..73291 | + | 1692 | WP_134799760.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C1P88_RS23555 | 73343..74552 | + | 1210 | Protein_81 | IS3 family transposase | - |
| C1P88_RS23565 | 74589..74768 | + | 180 | Protein_82 | IS66 family transposase | - |
| C1P88_RS25695 | 75075..75413 | - | 339 | WP_227804374.1 | hypothetical protein | - |
| C1P88_RS23575 | 75335..76462 | + | 1128 | WP_234426371.1 | group II intron reverse transcriptase/maturase | - |
| C1P88_RS23580 | 76545..76724 | + | 180 | Protein_85 | transposase domain-containing protein | - |
| C1P88_RS23585 | 76800..77237 | - | 438 | WP_199882191.1 | IS110 family transposase ISPko7 | Transposase |
| C1P88_RS23590 | 77493..78473 | - | 981 | WP_000431558.1 | ParB family protein | - |
| C1P88_RS23595 | 78473..79672 | - | 1200 | WP_000200287.1 | AAA family ATPase | - |
| C1P88_RS25700 | 79846..79980 | - | 135 | Protein_89 | hypothetical protein | - |
| C1P88_RS23605 | 79994..80332 | - | 339 | Protein_90 | IS1 family transposase | - |
| C1P88_RS23610 | 80399..81181 | - | 783 | WP_075335727.1 | IS21 family transposase IS100kyp | Transposase |
| C1P88_RS23615 | 81178..81534 | - | 357 | Protein_92 | IS21 family transposase IS100kyp | Transposase |
| C1P88_RS23620 | 81614..82807 | + | 1194 | WP_005064872.1 | IS4 family transposase ISSfl1 | Transposase |
| C1P88_RS23625 | 82833..83510 | - | 678 | Protein_94 | IS21 family transposase IS100kyp | Transposase |
| C1P88_RS23635 | 83597..83958 | - | 362 | Protein_95 | IS1 family transposase IS1N | Transposase |
| C1P88_RS23640 | 84298..84842 | - | 545 | Protein_96 | IS3 family transposase IS3H | Transposase |
| C1P88_RS23645 | 84985..85107 | + | 123 | Protein_97 | transposase domain-containing protein | - |
| C1P88_RS23655 | 85369..85935 | - | 567 | WP_000901798.1 | hypothetical protein | VF |
| C1P88_RS25120 | 86217..86531 | - | 315 | WP_011114726.1 | hypothetical protein | - |
| C1P88_RS25705 | 86609..86722 | - | 114 | Protein_100 | IS3 family transposase | - |
| C1P88_RS23675 | 87044..87721 | - | 678 | WP_000026474.1 | hypothetical protein | VF |
| C1P88_RS23680 | 88092..88229 | - | 138 | Protein_102 | IS630 family transposase | - |
| C1P88_RS23685 | 88311..88609 | - | 299 | Protein_103 | transposase | - |
| C1P88_RS25710 | 88863..88955 | + | 93 | Protein_104 | type III effector | - |
| C1P88_RS23690 | 89198..89357 | - | 160 | Protein_105 | integrase core domain-containing protein | - |
| C1P88_RS23695 | 89361..90590 | - | 1230 | Protein_106 | IS66 family transposase IS679 | Transposase |
| C1P88_RS23700 | 90610..90957 | - | 348 | WP_000622995.1 | IS66 family transposase ISCro1 | Transposase |
| C1P88_RS23705 | 90957..91334 | - | 378 | Protein_108 | IS66 family transposase ISCro1 | Transposase |
| C1P88_RS23710 | 91401..92747 | + | 1347 | WP_005079298.1 | IS4 family transposase IS4 | Transposase |
| C1P88_RS25125 | 92761..93042 | - | 282 | Protein_110 | IS66 family transposase ISCro1 | Transposase |
| C1P88_RS23720 | 93205..93390 | + | 186 | WP_000338650.1 | hypothetical protein | - |
| C1P88_RS23725 | 93438..93867 | + | 430 | Protein_112 | IS91 family transposase IS91 | Transposase |
| C1P88_RS23730 | 94054..94291 | + | 238 | Protein_113 | ATP-binding protein | - |
| C1P88_RS25715 | 94405..94663 | + | 259 | Protein_114 | integrase core domain-containing protein | - |
| C1P88_RS23735 | 94712..95290 | + | 579 | WP_134799762.1 | hypothetical protein | - |
| C1P88_RS23740 | 95399..95657 | - | 259 | Protein_116 | IS1 family transposase | - |
| C1P88_RS23745 | 95620..96197 | + | 578 | Protein_117 | ISL3 family transposase ISKox3 | Transposase |
| C1P88_RS23750 | 96322..97041 | + | 720 | WP_001121865.1 | Phosphothreonine lyase OspF | VF |
| C1P88_RS23755 | 97473..99182 | + | 1710 | WP_134799763.1 | hypothetical protein | VF |
| C1P88_RS23760 | 99289..99986 | + | 698 | WP_252988977.1 | IS1 family transposase IS1X2 | Transposase |
| C1P88_RS23765 | 100044..100310 | - | 267 | Protein_121 | hypothetical protein | - |
| C1P88_RS23770 | 100649..101334 | + | 686 | Protein_122 | IS3 family transposase ISSfl11 | Transposase |
| C1P88_RS23775 | 101351..101833 | + | 483 | Protein_123 | IS66 family transposase IS679 | Transposase |
| C1P88_RS24855 | 103561..105012 | + | 1452 | Protein_125 | hypothetical protein | VF |
| C1P88_RS23805 | 105365..106105 | - | 741 | WP_000850660.1 | PAP2 family phosphatase PhoN2 | - |
| C1P88_RS23810 | 106434..107300 | - | 867 | WP_001046939.1 | hypothetical protein | VF |
| C1P88_RS23815 | 107550..107669 | - | 120 | Protein_128 | Tn3 family transposase TnpA_ISNpu13 | Transposase |
| C1P88_RS23825 | 107913..108285 | + | 373 | Protein_129 | IS3 family transposase IS2 | Transposase |
| C1P88_RS23835 | 108847..109794 | - | 948 | WP_024258382.1 | Outer membrane protease IcsP | VF |
| C1P88_RS24860 | 110756..110893 | + | 138 | WP_011378983.1 | hypothetical protein | - |
| C1P88_RS23845 | 111175..111327 | - | 153 | Protein_132 | integrase core domain-containing protein | - |
| C1P88_RS23850 | 111383..111835 | + | 453 | Protein_133 | hypothetical protein | VF |
| C1P88_RS23860 | 112603..112851 | + | 249 | Protein_135 | hypothetical protein | VF |
| C1P88_RS23865 | 112875..113795 | - | 921 | Protein_136 | IS3 family transposase ISLad1 | Transposase |
| C1P88_RS23875 | 115129..115413 | + | 285 | Protein_138 | transposase domain-containing protein | - |
| C1P88_RS23880 | 115445..116059 | + | 615 | Protein_139 | IS21 family transposase ISEc10 | Transposase |
| C1P88_RS23885 | 116228..120322 | - | 4095 | WP_134799766.1 | Serine protease SepA autotransporter | VF |
| C1P88_RS23895 | 120724..120912 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| C1P88_RS23900 | 120922..121461 | + | 540 | Protein_142 | transposase zinc-binding domain-containing protein | - |
| C1P88_RS23905 | 121524..122680 | + | 1157 | WP_094099483.1 | IS3 family transposase ISSd1 | Transposase |
| C1P88_RS23910 | 122723..123388 | + | 666 | Protein_144 | IS91 family transposase ISSbo1 | Transposase |
| C1P88_RS24790 | 123554..123688 | + | 135 | Protein_145 | IS5 family transposase ISSfl7 | Transposase |
| C1P88_RS23925 | 123837..125291 | - | 1455 | WP_134799769.1 | hypothetical protein | VF |
| C1P88_RS23930 | 125752..126560 | + | 809 | WP_252988979.1 | IS5 family transposase ISSfl7 | Transposase |
| C1P88_RS25720 | 126655..126732 | + | 78 | Protein_148 | IS630 family transposase IS630 | Transposase |
| C1P88_RS23935 | 126805..127086 | - | 282 | Protein_149 | transposase domain-containing protein | - |
| C1P88_RS23940 | 127141..128350 | + | 1210 | Protein_150 | IS3 family transposase | - |
| C1P88_RS23950 | 128394..128525 | + | 132 | Protein_151 | transposase | - |
| C1P88_RS23960 | 129858..130106 | - | 249 | Protein_153 | IS3 family transposase IS911 | Transposase |
| C1P88_RS23965 | 130180..130517 | + | 338 | Protein_154 | integrase core domain-containing protein | - |
| C1P88_RS23970 | 130560..131083 | - | 524 | Protein_155 | IS3 family transposase ISSfl11 | Transposase |
| C1P88_RS23975 | 131151..131633 | - | 483 | WP_000405248.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C1P88_RS23980 | 131624..131926 | - | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C1P88_RS23990 | 132198..132470 | + | 273 | WP_000019164.1 | hypothetical protein | - |
| C1P88_RS23995 | 132451..133659 | + | 1209 | WP_134799754.1 | IS91 family transposase ISSbo1 | Transposase |
| C1P88_RS24005 | 133872..134680 | + | 809 | WP_232627014.1 | IS5 family transposase ISSfl7 | Transposase |
| C1P88_RS24010 | 134795..135826 | + | 1032 | Protein_161 | IS630 family transposase IS630 | Transposase |
| C1P88_RS24015 | 136020..136711 | + | 692 | WP_134799770.1 | IS1 family transposase | - |
| C1P88_RS24020 | 136728..136907 | - | 180 | Protein_163 | transposase | - |
| C1P88_RS24025 | 137237..138931 | + | 1695 | WP_134799771.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C1P88_RS24030 | 138961..139116 | - | 156 | Protein_165 | IS256 family transposase ISEc39 | Transposase |
| C1P88_RS24035 | 139262..139450 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| C1P88_RS24040 | 139460..140659 | + | 1200 | WP_134799772.1 | IS91 family transposase ISSbo1 | Transposase |
| C1P88_RS24045 | 140888..142075 | + | 1188 | WP_000937565.1 | IS91 family transposase ISEc37 | Transposase |
| C1P88_RS24060 | 143196..144053 | - | 858 | WP_000130973.1 | incFII family plasmid replication initiator RepA | - |
| C1P88_RS24065 | 144046..144120 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C1P88_RS24075 | 144344..144604 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| C1P88_RS24080 | 144844..145435 | - | 592 | Protein_172 | DUF2726 domain-containing protein | - |
| C1P88_RS24085 | 145474..145683 | - | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| C1P88_RS24090 | 145749..146905 | + | 1157 | WP_134799773.1 | IS3 family transposase ISSd1 | Transposase |
| C1P88_RS24095 | 146948..147187 | - | 240 | Protein_175 | thermonuclease family protein | - |
| C1P88_RS24105 | 147431..147643 | - | 213 | WP_004971339.1 | ANR family transcriptional regulator | - |
| C1P88_RS24110 | 147774..148334 | - | 561 | WP_000139368.1 | fertility inhibition protein FinO | - |
| C1P88_RS24115 | 148389..149135 | - | 747 | WP_000205722.1 | conjugal transfer pilus acetylase TraX | - |
| C1P88_RS24120 | 149155..154424 | - | 5270 | Protein_179 | Multifunctional conjugation protein TraI | Relaxase |
| C1P88_RS24130 | 154506..154733 | + | 228 | WP_000450531.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| C1P88_RS24135 | 154733..155131 | + | 399 | WP_000911318.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C1P88_RS24140 | 155140..155319 | - | 180 | Protein_182 | hypothetical protein | - |
| C1P88_RS24145 | 155364..156520 | + | 1157 | WP_134799775.1 | IS3 family transposase IS600 | Transposase |
| C1P88_RS24150 | 156565..157488 | + | 924 | Protein_184 | IS630 family transposase IS630 | Transposase |
| C1P88_RS24155 | 157642..158586 | - | 945 | WP_004996485.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| C1P88_RS24160 | 158651..159601 | - | 951 | WP_004970430.1 | virulence factor VirK | - |
| C1P88_RS24165 | 159606..160694 | - | 1089 | WP_134799776.1 | putative hexosyltransferase CapU | - |
| C1P88_RS24170 | 160697..161539 | - | 843 | WP_000931197.1 | polysaccharide deacetylase family protein | - |
| C1P88_RS24180 | 162022..164924 | + | 2903 | Protein_189 | hypothetical protein | - |
| C1P88_RS24185 | 164954..165278 | - | 325 | Protein_190 | IS3 family transposase | - |
| C1P88_RS25135 | 165276..165467 | + | 192 | Protein_191 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P88_RS25725 | 165481..165561 | - | 81 | Protein_192 | hypothetical protein | - |
| C1P88_RS24195 | 165602..166811 | - | 1210 | Protein_193 | IS3 family transposase | - |
| C1P88_RS24200 | 166868..168135 | - | 1268 | Protein_194 | IS4 family transposase IS4 | Transposase |
| C1P88_RS25140 | 168198..168464 | - | 267 | Protein_195 | IS66 family transposase ISCro1 | Transposase |
| C1P88_RS24210 | 168821..169411 | - | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| C1P88_RS25730 | 169494..169663 | - | 170 | Protein_197 | type II toxin-antitoxin system toxin YacB | - |
| C1P88_RS24220 | 169663..169932 | - | 270 | WP_000079956.1 | type II toxin-antitoxin system antitoxin YacA | - |
| C1P88_RS24225 | 170140..171777 | - | 1638 | WP_000936806.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C1P88_RS24235 | 172170..172475 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C1P88_RS24240 | 172477..172695 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C1P88_RS24245 | 173231..174322 | - | 1092 | Protein_202 | IS66 family transposase ISEc49 | Transposase |
| C1P88_RS24250 | 174330..174901 | + | 572 | Protein_203 | plasmid segregation protein ParM | - |
| C1P88_RS25735 | 174904..175086 | + | 183 | WP_234426364.1 | plasmid partitioning/stability family protein | - |
| C1P88_RS25145 | 175362..175499 | + | 138 | WP_000766699.1 | hypothetical protein | - |
| C1P88_RS24260 | 175631..175906 | - | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P88_RS24265 | 175906..176190 | - | 285 | WP_001178088.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C1P88_RS24275 | 176642..176893 | + | 252 | WP_001381727.1 | transporter | - |
| C1P88_RS24280 | 176943..177152 | + | 210 | Protein_209 | peptidoglycan-binding protein | - |
| C1P88_RS24285 | 177252..177437 | - | 186 | Protein_210 | IS21 family transposase IS100 | Transposase |
| C1P88_RS24290 | 177697..179298 | - | 1602 | WP_005080714.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P88_RS24295 | 179318..179665 | - | 348 | WP_000631715.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P88_RS24300 | 179662..180243 | - | 582 | Protein_213 | IS66 family transposase ISSfl3 | Transposase |
| C1P88_RS24305 | 180335..181563 | + | 1229 | WP_134799777.1 | IS3 family transposase IS2 | Transposase |
| C1P88_RS24310 | 181574..181672 | - | 99 | Protein_215 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P88_RS24320 | 181871..182341 | + | 471 | Protein_216 | IS1 family transposase IS1N | Transposase |
| C1P88_RS24325 | 182516..182901 | + | 386 | Protein_217 | IS3 family transposase ISSfl10 | Transposase |
| C1P88_RS24335 | 184151..184924 | + | 774 | Protein_219 | IS3 family transposase ISSd1 | Transposase |
| C1P88_RS25150 | 185019..185657 | + | 639 | WP_000607008.1 | hypothetical protein | VF |
| C1P88_RS24350 | 185772..186019 | + | 248 | Protein_221 | IS3 family transposase ISEae2 | Transposase |
| C1P88_RS24355 | 186107..187148 | + | 1042 | Protein_222 | IS3 family transposase | - |
| C1P88_RS24360 | 187228..187902 | + | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P88_RS24365 | 187899..188246 | + | 348 | WP_000631715.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P88_RS24370 | 188266..189867 | + | 1602 | WP_005079902.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P88_RS24375 | 189876..190631 | + | 756 | Protein_226 | IS110 family transposase ISSfl8 | Transposase |
| C1P88_RS24385 | 190934..191704 | - | 771 | WP_134799779.1 | hypothetical protein | - |
| C1P88_RS24390 | 191749..192231 | - | 483 | Protein_228 | DUF1380 domain-containing protein | - |
| C1P88_RS24395 | 192191..192412 | - | 222 | WP_001104864.1 | hypothetical protein | - |
| C1P88_RS24400 | 192413..193096 | - | 684 | WP_000086135.1 | DNA methylase | - |
| C1P88_RS24405 | 193160..193471 | - | 312 | WP_032327311.1 | hypothetical protein | - |
| C1P88_RS24410 | 193468..194370 | - | 903 | WP_134799780.1 | DUF1281 domain-containing protein | - |
| C1P88_RS24420 | 194809..195768 | + | 960 | WP_000921952.1 | plasmid segregation protein ParM | - |
| C1P88_RS24425 | 195768..196163 | + | 396 | WP_000445931.1 | plasmid partitioning/stability family protein | - |
| C1P88_RS24430 | 196316..196696 | + | 381 | WP_005015412.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| C1P88_RS24435 | 196742..197586 | + | 845 | Protein_236 | IS5 family transposase ISSfl7 | Transposase |
| C1P88_RS25740 | 197597..197701 | + | 105 | Protein_237 | hypothetical protein | - |
| C1P88_RS24440 | 197756..198505 | - | 750 | WP_000828661.1 | phosphatase PAP2 family protein | - |
| C1P88_RS24450 | 200081..200347 | + | 267 | Protein_240 | reverse transcriptase | - |
| C1P88_RS24455 | 200421..200540 | + | 120 | Protein_241 | transposase domain-containing protein | - |
| C1P88_RS24460 | 200673..200843 | + | 171 | Protein_242 | transposase | - |
| C1P88_RS24465 | 200854..202506 | - | 1653 | WP_000612525.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| C1P88_RS24470 | 202847..204055 | - | 1209 | Protein_244 | IS3 family transposase | - |
| C1P88_RS24475 | 204228..204546 | - | 319 | Protein_245 | Outer membrane usher protein PapC | VF |
| C1P88_RS24480 | 204690..208000 | - | 3311 | Protein_246 | outer membrane autotransporter IcsA | - |
| C1P88_RS24485 | 208529..209731 | + | 1203 | WP_001195005.1 | Cysteine protease-like VirA | VF |
| C1P88_RS24490 | 209910..210595 | + | 686 | Protein_248 | IS3 family transposase | - |
| C1P88_RS24495 | 210597..210963 | + | 367 | Protein_249 | IS3 family transposase IS629 | Transposase |
| C1P88_RS25155 | 210966..211364 | + | 399 | Protein_250 | reverse transcriptase/maturase family protein | - |
| C1P88_RS24515 | 212117..212482 | + | 366 | WP_000124085.1 | hypothetical protein | - |
| C1P88_RS24520 | 212530..212959 | + | 430 | Protein_252 | IS91 family transposase IS91 | Transposase |
| C1P88_RS24525 | 213134..213283 | + | 150 | Protein_253 | IS3 family transposase IS629 | Transposase |
| C1P88_RS24535 | 213316..214524 | - | 1209 | Protein_254 | IS3 family transposase | - |
| C1P88_RS24540 | 214577..215031 | + | 455 | Protein_255 | ISL3 family transposase ISKox3 | Transposase |
| C1P88_RS24545 | 215061..215462 | + | 402 | Protein_256 | transposase | - |
| C1P88_RS24550 | 216047..216763 | + | 717 | WP_005059327.1 | hypothetical protein | - |
| C1P88_RS25745 | 216997..217125 | + | 129 | Protein_258 | IS630 family transposase | - |
| C1P88_RS25160 | 217315..217719 | + | 405 | WP_011114759.1 | hypothetical protein | - |
| C1P88_RS24565 | 217782..218389 | + | 608 | Protein_260 | IS3 family transposase IS3H | Transposase |
| C1P88_RS24570 | 218558..219757 | - | 1200 | WP_000947171.1 | IS91 family transposase ISSbo1 | Transposase |
| C1P88_RS24575 | 219767..219955 | - | 189 | WP_000956787.1 | hypothetical protein | - |
| C1P88_RS24580 | 220146..220355 | - | 210 | Protein_263 | IS3 family transposase IS600 | Transposase |
| C1P88_RS24585 | 220420..221453 | + | 1034 | Protein_264 | IS3 family transposase ISSfl11 | Transposase |
| C1P88_RS24595 | 223396..223629 | - | 234 | WP_000538708.1 | biofilm/acid-resistance regulator YmgB/AriR | - |
| C1P88_RS24600 | 223651..224679 | - | 1029 | WP_001284685.1 | Surface presentation of antigens protein SpaS | VF |
| C1P88_RS24605 | 224686..225456 | - | 771 | WP_000355395.1 | Surface presentation of antigens protein SpaR | VF |
| C1P88_RS24610 | 225456..225716 | - | 261 | WP_001280545.1 | hypothetical protein | VF |
| C1P88_RS24615 | 225731..226381 | - | 651 | WP_000947539.1 | Surface presentation of antigens protein SpaP | VF |
| C1P88_RS24620 | 226386..227267 | - | 882 | WP_134799741.1 | Surface presentation of antigens protein SpaO | VF |
| C1P88_RS24625 | 227261..228139 | - | 879 | WP_001162455.1 | Surface presentation of antigens protein SpaN | VF |
| C1P88_RS24630 | 228108..228464 | - | 357 | WP_024260642.1 | hypothetical protein | VF |
| C1P88_RS24635 | 228558..229850 | - | 1293 | WP_000122616.1 | putative ATP synthase SpaL/MxiB | VF |
| C1P88_RS24640 | 229854..230255 | - | 402 | WP_000065501.1 | Surface presentation of antigens protein SpaK | VF |
| C1P88_RS24645 | 230268..232328 | - | 2061 | WP_000616104.1 | Protein MxiA | VF |
| C1P88_RS24650 | 232341..233408 | - | 1068 | WP_000887821.1 | Protein MxiC | VF |
| C1P88_RS24655 | 233427..235127 | - | 1701 | WP_000714356.1 | Outer membrane protein MxiD | VF |
| C1P88_RS24660 | 235114..235746 | - | 633 | WP_000398259.1 | Invasion protein InvF | VF |
| C1P88_RS24665 | 235876..236304 | - | 429 | WP_001346200.1 | Lipoprotein MxiM | VF |
| C1P88_RS24670 | 236288..236695 | - | 408 | WP_000609862.1 | hypothetical protein | VF |
| C1P88_RS24675 | 236688..237383 | - | 696 | WP_010921671.1 | Oxygen-regulated invasion protein OrgB | VF |
| C1P88_RS24680 | 237325..237852 | - | 528 | WP_000620627.1 | Oxygen-regulated invasion protein OrgA | VF |
| C1P88_RS24685 | 237849..238574 | - | 726 | WP_000621942.1 | Lipoprotein PrgK | VF |
| C1P88_RS24690 | 238580..238873 | - | 294 | WP_001106823.1 | hypothetical protein | VF |
| C1P88_RS24695 | 238886..239137 | - | 252 | WP_044141262.1 | Protein MxiH | VF |
| C1P88_RS25165 | 239145..240261 | - | 1117 | Protein_287 | Protein MxiG | VF |
| C1P88_RS24710 | 240270..240728 | - | 459 | WP_000086109.1 | hypothetical protein | VF |
| C1P88_RS24715 | 240728..241090 | - | 363 | WP_000389732.1 | Chaperone protein IpgE | VF |
| C1P88_RS24720 | 241100..242718 | - | 1619 | Protein_290 | type III secretion system effector inositol phosphate phosphatase | - |
| C1P88_RS25750 | 243025..244518 | + | 1494 | Protein_291 | type III secretion system effector IcsB | - |
| C1P88_RS24740 | 244531..244920 | + | 390 | WP_010921664.1 | hypothetical protein | VF |
| C1P88_RS24745 | 244936..245004 | + | 69 | Protein_293 | protein ipgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|