MGE detailed information
MGE type: Prophage MGE length: 16350 bp
Accession: NZ_CP026793 Location: 4202469..4218818 Organism: Shigella flexneri strain 74-1170 Replicon: chromosome
Accession: NZ_CP026793 Location: 4202469..4218818 Organism: Shigella flexneri strain 74-1170 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P81_RS21335 (4198134) | 4198134..4198358 | - | 225 | Protein_4095 | ferredoxin family protein | - |
| C1P81_RS21340 (4198355) | 4198355..4199644 | - | 1290 | WP_001278524.1 | FAD-dependent oxidoreductase | - |
| C1P81_RS21345 (4199700) | 4199700..4200638 | - | 939 | WP_000080702.1 | electron transfer flavoprotein subunit alpha | - |
| C1P81_RS21350 (4200658) | 4200658..4201422 | - | 765 | WP_000692136.1 | electron transfer flavoprotein | - |
| C1P81_RS21355 (4201741) | 4201741..4202220 | + | 480 | Protein_4099 | cupin domain-containing protein | - |
| C1P81_RS21360 (4202275) | 4202275..4202972 | + | 698 | WP_248501154.1 | IS1 family transposase | - |
| C1P81_RS21365 (4202966) | 4202966..4203133 | - | 168 | WP_005062520.1 | hypothetical protein | - |
| C1P81_RS21370 (4203535) | 4203535..4204296 | - | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| C1P81_RS21375 (4204364) | 4204364..4204567 | - | 204 | WP_000543395.1 | two-component system connector SafA | - |
| C1P81_RS21380 (4204815) | 4204815..4207094 | - | 2280 | WP_000726666.1 | acid resistance putative oxidoreductase YdeP | - |
| C1P81_RS21385 (4207428) | 4207428..4208177 | - | 750 | Protein_4105 | fimbrial protein | - |
| C1P81_RS21390 (4208233) | 4208233..4208930 | + | 698 | WP_252988948.1 | IS1 family transposase | - |
| C1P81_RS21395 (4208948) | 4208948..4209826 | + | 879 | Protein_4107 | IS3 family transposase | - |
| C1P81_RS21400 (4209851) | 4209851..4210030 | - | 180 | WP_000372594.1 | class II holin family protein | - |
| C1P81_RS26490 (4210180) | 4210180..4210341 | - | 162 | WP_001323614.1 | hypothetical protein | - |
| C1P81_RS21405 (4210341) | 4210341..4210526 | - | 186 | Protein_4110 | DUF1737 domain-containing protein | - |
| C1P81_RS21410 (4210786) | 4210786..4211121 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| C1P81_RS21415 (4211402) | 4211402..4211510 | - | 109 | Protein_4112 | DUF3927 family protein | - |
| C1P81_RS21435 (4212431) | 4212431..4213252 | - | 822 | WP_000762882.1 | antitermination protein | - |
| C1P81_RS21440 (4213267) | 4213267..4213623 | - | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C1P81_RS21445 (4213636) | 4213636..4214685 | - | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| C1P81_RS21450 (4214687) | 4214687..4214965 | - | 279 | Protein_4116 | hypothetical protein | - |
| C1P81_RS21455 (4215032) | 4215032..4215283 | - | 252 | WP_000980987.1 | protein Rem | - |
| C1P81_RS21460 (4215501) | 4215501..4215656 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C1P81_RS21465 (4215728) | 4215728..4216015 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| C1P81_RS21470 (4216015) | 4216015..4216254 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| C1P81_RS21475 (4216279) | 4216279..4216584 | + | 306 | WP_071818640.1 | hypothetical protein | - |
| C1P81_RS21485 (4217799) | 4217799..4218818 | + | 1020 | Protein_4123 | MHS family MFS transporter YdfJ | - |
| C1P81_RS21490 (4218907) | 4218907..4220367 | + | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| C1P81_RS21495 (4220403) | 4220403..4220606 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C1P81_RS21500 (4220784) | 4220784..4221470 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| C1P81_RS21505 (4221559) | 4221559..4222305 | - | 747 | WP_005050098.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Shigella flexneri 5a str. M90T | Prophage | TA120372 | NZ_CP037923 | 1629251..1643278 | 0.006 |