MGE detailed information
MGE type: Prophage MGE length: 15732 bp
Accession: NZ_CP026788 Location: 746837..762568 Organism: Shigella flexneri 2a strain ATCC 29903 Replicon: chromosome
Accession: NZ_CP026788 Location: 746837..762568 Organism: Shigella flexneri 2a strain ATCC 29903 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P79_RS04030 (743350) | 743350..744096 | + | 747 | WP_005050098.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| C1P79_RS04035 (744185) | 744185..744871 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| C1P79_RS04040 (745049) | 745049..745252 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C1P79_RS04045 (745288) | 745288..746748 | - | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| C1P79_RS04050 (746837) | 746837..747856 | - | 1020 | Protein_760 | MHS family MFS transporter YdfJ | - |
| C1P79_RS04055 (747918) | 747918..749074 | + | 1157 | WP_094105058.1 | IS3 family transposase ISSd1 | Transposase |
| C1P79_RS04060 (749071) | 749071..749349 | - | 279 | WP_014532248.1 | hypothetical protein | - |
| C1P79_RS04065 (749425) | 749425..750593 | + | 1169 | WP_000747032.1 | IS3 family transposase ISLad1 | Transposase |
| C1P79_RS04070 (750653) | 750653..750892 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| C1P79_RS04075 (750892) | 750892..751179 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| C1P79_RS04080 (751251) | 751251..751406 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C1P79_RS04085 (751624) | 751624..751875 | + | 252 | WP_000980987.1 | protein Rem | - |
| C1P79_RS04090 (751942) | 751942..752220 | + | 279 | Protein_768 | hypothetical protein | - |
| C1P79_RS04095 (752222) | 752222..753271 | + | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| C1P79_RS04100 (753284) | 753284..753640 | + | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C1P79_RS04105 (753655) | 753655..754476 | + | 822 | WP_000762882.1 | antitermination protein | - |
| C1P79_RS04125 (755397) | 755397..755505 | + | 109 | Protein_772 | DUF3927 family protein | - |
| C1P79_RS04130 (755786) | 755786..756121 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| C1P79_RS04135 (756381) | 756381..756566 | + | 186 | Protein_774 | DUF1737 domain-containing protein | - |
| C1P79_RS25765 (756566) | 756566..756727 | + | 162 | WP_001323614.1 | hypothetical protein | - |
| C1P79_RS04140 (756877) | 756877..757056 | + | 180 | WP_000372594.1 | class II holin family protein | - |
| C1P79_RS04145 (757081) | 757081..757986 | - | 906 | Protein_777 | IS3 family transposase IS600 | Transposase |
| C1P79_RS04155 (758755) | 758755..759504 | + | 750 | Protein_779 | hypothetical protein | VF |
| C1P79_RS04160 (759838) | 759838..762117 | + | 2280 | WP_000726666.1 | acid resistance putative oxidoreductase YdeP | - |
| C1P79_RS04165 (762365) | 762365..762568 | + | 204 | WP_000543395.1 | two-component system connector SafA | - |
| C1P79_RS04170 (762636) | 762636..763397 | + | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| C1P79_RS04175 (763799) | 763799..763945 | + | 147 | Protein_783 | sulfatase | - |
| C1P79_RS04185 (764712) | 764712..765191 | - | 480 | Protein_785 | cupin domain-containing protein | - |
| C1P79_RS04190 (765510) | 765510..766274 | + | 765 | WP_000692136.1 | electron transfer flavoprotein | - |
| C1P79_RS04195 (766294) | 766294..767232 | + | 939 | WP_000080702.1 | electron transfer flavoprotein subunit alpha | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Shigella flexneri 5a str. M90T | Prophage | TA120372 | NZ_CP037923 | 1629251..1643278 | 0.005 |