MGE detailed information
MGE type: IScluster/Tn MGE length: 17407 bp
Accession: NZ_CP026787 Location: 45223..62629 Organism: Shigella dysenteriae strain NCTC 9718 Replicon: plasmid unnamed
Accession: NZ_CP026787 Location: 45223..62629 Organism: Shigella dysenteriae strain NCTC 9718 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P65_RS24175 () | 40564..42288 | - | 1725 | WP_011379044.1 | T3SS effector E3 ubiquitin-protein ligase IpaH4.5 | - |
| C1P65_RS24180 () | 42716..44386 | - | 1671 | WP_171764686.1 | T3SS effector E3 ubiquitin-protein ligase IpaH7.8 | - |
| C1P65_RS24185 () | 44743..44922 | + | 180 | Protein_53 | transposase | - |
| C1P65_RS24190 () | 44939..45153 | - | 215 | Protein_54 | IS1 family transposase | - |
| C1P65_RS24195 () | 45223..45987 | - | 765 | Protein_55 | IS3 family transposase ISSd1 | Transposase |
| C1P65_RS24200 () | 46003..46700 | - | 698 | Protein_56 | IS1 family transposase | - |
| C1P65_RS24205 () | 46756..47156 | - | 401 | Protein_57 | IS3 family transposase ISSfl10 | Transposase |
| C1P65_RS26390 () | 47221..47361 | - | 141 | Protein_58 | IS3 family transposase | - |
| C1P65_RS24220 () | 48223..48723 | - | 501 | Protein_60 | transposase | - |
| C1P65_RS26395 () | 48838..49476 | - | 639 | WP_000607008.1 | hypothetical protein | VF |
| C1P65_RS24230 () | 49635..50104 | - | 470 | Protein_62 | IS1 family transposase IS1N | Transposase |
| C1P65_RS24240 () | 50440..50625 | + | 186 | Protein_63 | IS21 family transposase IS100 | Transposase |
| C1P65_RS24245 () | 50725..50934 | - | 210 | Protein_64 | peptidoglycan-binding protein | - |
| C1P65_RS24260 () | 51686..51970 | + | 285 | WP_001178088.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C1P65_RS24265 () | 51970..52245 | + | 276 | WP_000421263.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P65_RS26400 () | 52377..52514 | - | 138 | WP_000766699.1 | hypothetical protein | - |
| C1P65_RS24270 () | 52606..52971 | - | 366 | WP_000361390.1 | plasmid partitioning/stability family protein | - |
| C1P65_RS24275 () | 52974..53542 | - | 569 | Protein_69 | plasmid segregation protein ParM | - |
| C1P65_RS24280 () | 53550..54640 | + | 1091 | Protein_70 | IS66 family transposase ISEc49 | Transposase |
| C1P65_RS24285 () | 55016..55709 | - | 694 | Protein_71 | IS1 family transposase | - |
| C1P65_RS24290 () | 55949..56167 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C1P65_RS24295 () | 56169..56474 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C1P65_RS24300 () | 56510..56605 | + | 96 | Protein_74 | transposase domain-containing protein | - |
| C1P65_RS24305 () | 56733..57427 | + | 695 | WP_087786203.1 | IS1-like element IS1N family transposase | - |
| C1P65_RS24310 () | 57641..59278 | + | 1638 | WP_000936810.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C1P65_RS24315 () | 59486..59755 | + | 270 | WP_000079957.1 | hypothetical protein | - |
| C1P65_RS26585 () | 59752..59978 | + | 227 | Protein_78 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C1P65_RS24325 () | 60007..60597 | + | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| C1P65_RS26405 () | 60936..61220 | + | 285 | Protein_80 | IS66 family transposase ISCro1 | Transposase |
| C1P65_RS24335 () | 61283..62629 | + | 1347 | Protein_81 | IS4 family transposase IS4 | Transposase |
| C1P65_RS26410 () | 62643..62834 | - | 192 | Protein_82 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P65_RS24345 () | 62832..63156 | + | 325 | Protein_83 | IS3 family transposase | - |
| C1P65_RS24350 () | 63186..66098 | - | 2913 | WP_023636847.1 | ankyrin repeat protein | - |
| C1P65_RS24355 () | 66101..66217 | + | 117 | WP_004996477.1 | hypothetical protein | - |
| C1P65_RS24360 () | 66581..67422 | + | 842 | Protein_86 | polysaccharide deacetylase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|