MGE detailed information
MGE type: IScluster/Tn MGE length: 38168 bp
Accession: NZ_CP026771 Location: 144026..182193 Organism: Shigella flexneri Y strain 93-3063 Replicon: plasmid unnamed3
Accession: NZ_CP026771 Location: 144026..182193 Organism: Shigella flexneri Y strain 93-3063 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P87_RS25250 | 139111..139953 | - | 843 | WP_075332618.1 | polysaccharide deacetylase family protein | - |
| C1P87_RS25260 | 140436..143348 | + | 2913 | WP_167697595.1 | ankyrin repeat domain-containing protein | - |
| C1P87_RS25265 | 143378..143702 | - | 325 | Protein_165 | IS3 family transposase | - |
| C1P87_RS26425 | 143700..143891 | + | 192 | Protein_166 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P87_RS27170 | 143905..143985 | - | 81 | Protein_167 | hypothetical protein | - |
| C1P87_RS25275 | 144026..145236 | - | 1211 | Protein_168 | IS3 family transposase | - |
| C1P87_RS25280 | 145293..146561 | - | 1269 | Protein_169 | IS4 family transposase IS4 | Transposase |
| C1P87_RS26430 | 146624..146890 | - | 267 | Protein_170 | IS66 family transposase ISCro1 | Transposase |
| C1P87_RS25290 | 147247..147837 | - | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| C1P87_RS27175 | 147920..148089 | - | 170 | Protein_172 | type II toxin-antitoxin system toxin YacB | - |
| C1P87_RS25300 | 148089..148358 | - | 270 | Protein_173 | type II toxin-antitoxin system antitoxin YacA | - |
| C1P87_RS25305 | 148566..150203 | - | 1638 | WP_134798326.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C1P87_RS25310 | 150465..150566 | - | 102 | WP_250952192.1 | transposase domain-containing protein | - |
| C1P87_RS25315 | 150596..150901 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C1P87_RS25320 | 150903..151121 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C1P87_RS25325 | 151657..152610 | - | 954 | Protein_178 | IS66 family transposase ISEc49 | Transposase |
| C1P87_RS25330 | 152666..153363 | + | 698 | WP_223368647.1 | IS1 family transposase IS1X2 | Transposase |
| C1P87_RS25340 | 153589..153864 | - | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P87_RS25345 | 153864..154148 | - | 285 | WP_024260696.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C1P87_RS25355 | 154600..154851 | + | 252 | WP_001381727.1 | transporter | - |
| C1P87_RS25360 | 154901..155110 | + | 210 | Protein_183 | peptidoglycan-binding protein | - |
| C1P87_RS25365 | 155204..155395 | - | 192 | Protein_184 | IS21 family transposase IS100 | Transposase |
| C1P87_RS25370 | 155584..156513 | - | 930 | Protein_185 | IS66 family transposase ISSfl3 | Transposase |
| C1P87_RS25380 | 157771..158322 | - | 552 | Protein_187 | IS66 family transposase ISSfl3 | Transposase |
| C1P87_RS25385 | 158319..158669 | - | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P87_RS25390 | 158666..159340 | - | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P87_RS25400 | 159539..160009 | + | 471 | Protein_190 | IS1 family transposase IS1N | Transposase |
| C1P87_RS26435 | 160168..160806 | + | 639 | WP_000607008.1 | hypothetical protein | VF |
| C1P87_RS25410 | 160921..161190 | + | 270 | Protein_192 | IS3 family transposase ISEc48 | Transposase |
| C1P87_RS25415 | 161278..162320 | + | 1043 | Protein_193 | IS3 family transposase IS2 | Transposase |
| C1P87_RS25420 | 162400..163074 | + | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P87_RS25425 | 163071..163421 | + | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P87_RS25430 | 163418..165019 | + | 1602 | WP_011110603.1 | IS66 family transposase ISSfl3 | Transposase |
| C1P87_RS25435 | 165028..165747 | + | 720 | Protein_197 | IS110 family transposase ISSfl8 | Transposase |
| C1P87_RS25445 | 166086..166856 | - | 771 | WP_001006196.1 | hypothetical protein | - |
| C1P87_RS25450 | 166901..167387 | - | 487 | Protein_199 | DUF1380 domain-containing protein | - |
| C1P87_RS25455 | 167347..167568 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| C1P87_RS25460 | 167569..168252 | - | 684 | WP_000086135.1 | DNA methylase | - |
| C1P87_RS27180 | 168316..168390 | - | 75 | Protein_202 | hypothetical protein | - |
| C1P87_RS25470 | 168937..169953 | - | 1017 | WP_000219394.1 | IS110 family transposase ISShdy1 | Transposase |
| C1P87_RS25475 | 170051..170293 | - | 243 | WP_032178760.1 | hypothetical protein | - |
| C1P87_RS25480 | 170290..171192 | - | 903 | WP_128567749.1 | DUF1281 domain-containing protein | - |
| C1P87_RS25490 | 171632..172591 | + | 960 | WP_000921952.1 | plasmid segregation protein ParM | - |
| C1P87_RS25495 | 172591..172986 | + | 396 | WP_000445929.1 | plasmid partitioning/stability family protein | - |
| C1P87_RS25500 | 173169..173549 | + | 381 | WP_005015412.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| C1P87_RS25505 | 173595..174439 | + | 845 | WP_094081568.1 | IS5 family transposase ISSfl7 | Transposase |
| C1P87_RS27185 | 174450..174554 | + | 105 | Protein_210 | hypothetical protein | - |
| C1P87_RS25510 | 174609..175358 | - | 750 | WP_000828661.1 | phosphatase PAP2 family protein | - |
| C1P87_RS25520 | 175736..175936 | + | 201 | Protein_212 | IS3 family transposase ISSfl10 | Transposase |
| C1P87_RS25525 | 176063..176758 | + | 696 | Protein_213 | group II intron reverse transcriptase/maturase | - |
| C1P87_RS25530 | 176770..177998 | - | 1229 | Protein_214 | IS3-like element IS2 family transposase | - |
| C1P87_RS25535 | 178096..178485 | + | 390 | Protein_215 | reverse transcriptase | - |
| C1P87_RS25540 | 178559..178678 | + | 120 | Protein_216 | transposase domain-containing protein | - |
| C1P87_RS25545 | 178811..178981 | + | 171 | Protein_217 | transposase | - |
| C1P87_RS25550 | 178992..180644 | - | 1653 | WP_000612525.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| C1P87_RS25555 | 180985..182193 | - | 1209 | Protein_219 | IS3 family transposase IS629 | Transposase |
| C1P87_RS25560 | 182366..182684 | - | 319 | Protein_220 | fimbria/pilus outer membrane usher protein | - |
| C1P87_RS25565 | 182828..186136 | - | 3309 | WP_134798328.1 | outer membrane autotransporter IcsA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|