MGE detailed information
MGE type: IScluster/Tn MGE length: 14583 bp
Accession: NZ_CP026767 Location: 63036..77618 Organism: Shigella boydii strain 59-248 Replicon: plasmid unnamed
Accession: NZ_CP026767 Location: 63036..77618 Organism: Shigella boydii strain 59-248 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P58_RS24890 () | 59106..62413 | + | 3308 | Protein_67 | outer membrane autotransporter IcsA | - |
| C1P58_RS26325 () | 62599..63154 | + | 556 | Protein_68 | fimbria/pilus outer membrane usher protein | - |
| C1P58_RS26330 () | 64344..64553 | - | 210 | WP_073691819.1 | hypothetical protein | - |
| C1P58_RS24920 () | 64608..65776 | + | 1169 | WP_134802526.1 | IS3 family transposase | - |
| C1P58_RS24930 () | 66461..66679 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C1P58_RS24935 () | 66681..66986 | + | 306 | WP_073691655.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C1P58_RS24940 () | 67010..67117 | + | 108 | WP_023592908.1 | transposase domain-containing protein | - |
| C1P58_RS24945 () | 67379..69016 | + | 1638 | WP_039076510.1 | T3SS effector E3 ubiquitin-protein ligase IpaH9.8 | - |
| C1P58_RS24950 () | 69224..69493 | + | 270 | WP_000079956.1 | hypothetical protein | - |
| C1P58_RS26410 () | 69490..69662 | + | 173 | Protein_77 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C1P58_RS24960 () | 69726..70423 | - | 698 | Protein_78 | IS1 family transposase | - |
| C1P58_RS24965 () | 70630..70746 | + | 117 | WP_004996477.1 | hypothetical protein | - |
| C1P58_RS24975 () | 72377..73219 | + | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| C1P58_RS24980 () | 73222..74310 | + | 1089 | WP_005059238.1 | putative hexosyltransferase CapU | - |
| C1P58_RS24985 () | 74315..75265 | + | 951 | WP_012449328.1 | virulence factor VirK | - |
| C1P58_RS24990 () | 75330..76274 | + | 945 | WP_005027201.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| C1P58_RS24995 () | 76428..77099 | - | 672 | Protein_85 | IS630 family transposase | - |
| C1P58_RS25000 () | 77115..77812 | - | 698 | Protein_86 | IS1 family transposase | - |
| C1P58_RS25005 () | 77868..78332 | + | 465 | Protein_87 | conjugal transfer protein TraD | - |
| C1P58_RS25010 () | 78341..78739 | - | 399 | WP_073690939.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| C1P58_RS25015 () | 78739..78966 | - | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| C1P58_RS25020 () | 79051..79467 | + | 417 | WP_171548060.1 | conjugative relaxase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|