MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 208085 bp
Accession: NZ_CP026605 Location: 1..208085 Organism: Catenovulum sp. CCB-QB4 Replicon: plasmid unnamed1
Accession: NZ_CP026605 Location: 1..208085 Organism: Catenovulum sp. CCB-QB4 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2869_RS21700 () | 426..830 | - | 405 | WP_108605162.1 | restriction endonuclease | - |
| C2869_RS21705 () | 901..1095 | - | 195 | WP_108605163.1 | helix-turn-helix domain-containing protein | - |
| C2869_RS21710 () | 1323..2429 | + | 1107 | Protein_2 | site-specific DNA-methyltransferase | - |
| C2869_RS21715 () | 2345..3294 | + | 950 | Protein_3 | hypothetical protein | - |
| C2869_RS21720 () | 3398..3940 | + | 543 | WP_108605164.1 | SMI1/KNR4 family protein | - |
| C2869_RS21725 () | 4212..6272 | - | 2061 | WP_108605165.1 | glycoside hydrolase family 97 protein | - |
| C2869_RS21730 () | 6604..8103 | - | 1500 | WP_108605166.1 | L-arabinose isomerase | - |
| C2869_RS21735 () | 8128..8820 | - | 693 | WP_108605167.1 | L-ribulose-5-phosphate 4-epimerase | - |
| C2869_RS21740 () | 8820..10484 | - | 1665 | WP_108605287.1 | ribulokinase | - |
| C2869_RS21745 () | 11173..12435 | + | 1263 | WP_159084279.1 | hypothetical protein | - |
| C2869_RS21750 () | 12448..12870 | + | 423 | WP_108605169.1 | phosphate ABC transporter substrate-binding protein | - |
| C2869_RS21755 () | 13039..13944 | - | 906 | WP_108605170.1 | LysR family transcriptional regulator | - |
| C2869_RS21760 () | 14048..15028 | + | 981 | WP_108605171.1 | aldo/keto reductase | - |
| C2869_RS21765 () | 15403..15750 | - | 348 | WP_108605172.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| C2869_RS21770 () | 15747..15995 | - | 249 | WP_108605173.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| C2869_RS21775 () | 16389..17951 | - | 1563 | WP_108605174.1 | sodium/sugar symporter | - |
| C2869_RS21780 () | 18227..20179 | - | 1953 | WP_159084280.1 | prolyl oligopeptidase family serine peptidase | - |
| C2869_RS21785 () | 20328..22319 | - | 1992 | WP_108605176.1 | transketolase | - |
| C2869_RS21790 () | 22563..24407 | - | 1845 | WP_108605288.1 | family 43 glycosylhydrolase | - |
| C2869_RS21795 () | 24585..25613 | - | 1029 | WP_108605177.1 | arabinan endo-1,5-alpha-L-arabinosidase | - |
| C2869_RS21800 () | 25788..26852 | + | 1065 | WP_108605178.1 | glycoside hydrolase family 43 protein | - |
| C2869_RS21805 () | 27425..28138 | + | 714 | WP_108605179.1 | FadR family transcriptional regulator | - |
| C2869_RS21810 () | 28158..29531 | - | 1374 | WP_108605180.1 | glycoside-pentoside-hexuronide (GPH):cation symporter | - |
| C2869_RS21815 () | 29781..32147 | - | 2367 | WP_108605181.1 | glycoside hydrolase family 127 protein | - |
| C2869_RS21820 () | 32154..33116 | - | 963 | WP_108605182.1 | glycoside hydrolase family 43 protein | - |
| C2869_RS21825 () | 33162..34520 | - | 1359 | WP_108605183.1 | MFS transporter | - |
| C2869_RS21830 () | 34811..35776 | + | 966 | WP_108605184.1 | glycoside hydrolase family 43 protein | - |
| C2869_RS22530 () | 36526..36702 | + | 177 | WP_159084281.1 | hypothetical protein | - |
| C2869_RS21835 () | 36710..37357 | + | 648 | WP_108605185.1 | hypothetical protein | - |
| C2869_RS21840 () | 37433..38914 | - | 1482 | WP_108605186.1 | aldehyde dehydrogenase family protein | - |
| C2869_RS21845 () | 39186..40364 | - | 1179 | WP_108605187.1 | pectate lyase | - |
| C2869_RS21850 () | 40891..42441 | + | 1551 | WP_108605188.1 | RICIN domain-containing protein | - |
| C2869_RS21855 () | 42519..44966 | - | 2448 | WP_159084282.1 | DUF4982 domain-containing protein | - |
| C2869_RS21860 () | 45218..46468 | - | 1251 | WP_108605190.1 | type II toxin-antitoxin system HipA family toxin | - |
| C2869_RS21865 () | 46455..46736 | - | 282 | WP_108605191.1 | helix-turn-helix domain-containing protein | - |
| C2869_RS21870 () | 47010..49826 | - | 2817 | WP_108605192.1 | TonB-dependent receptor | - |
| C2869_RS21875 () | 49931..53437 | - | 3507 | WP_108605193.1 | family 43 glycosylhydrolase | - |
| C2869_RS21880 () | 53893..55746 | + | 1854 | WP_108605194.1 | RICIN domain-containing protein | - |
| C2869_RS21885 () | 55952..57091 | + | 1140 | WP_108601389.1 | IS110 family transposase ISGdi7 | Transposase |
| C2869_RS21890 () | 57627..58889 | + | 1263 | WP_108605195.1 | IS4 family transposase ISPa1635 | Transposase |
| C2869_RS21895 () | 59202..60188 | + | 987 | WP_108605196.1 | IS110 family transposase IS1663 | Transposase |
| C2869_RS21900 () | 60563..61480 | + | 918 | WP_108605197.1 | transporter substrate-binding domain-containing protein | - |
| C2869_RS21905 () | 61606..62658 | + | 1053 | WP_108605289.1 | galactose mutarotase | - |
| C2869_RS21910 () | 63189..65126 | + | 1938 | WP_108605198.1 | glycoside hydrolase family 97 protein | - |
| C2869_RS21915 () | 65383..66801 | + | 1419 | WP_108605199.1 | family 43 glycosylhydrolase | - |
| C2869_RS21920 () | 66854..67855 | - | 1002 | WP_108605200.1 | substrate-binding domain-containing protein | - |
| C2869_RS21925 () | 67901..69223 | - | 1323 | WP_108605201.1 | MFS transporter | - |
| C2869_RS21930 () | 69251..71839 | - | 2589 | WP_108605202.1 | hypothetical protein | - |
| C2869_RS21935 () | 71914..72771 | - | 858 | WP_108605290.1 | diguanylate cyclase | - |
| C2869_RS21940 () | 72934..75276 | - | 2343 | WP_108605203.1 | DUF4982 domain-containing protein | - |
| C2869_RS21945 () | 75368..78109 | - | 2742 | WP_108605204.1 | TonB-dependent receptor | - |
| C2869_RS21950 () | 78540..80333 | - | 1794 | WP_108605205.1 | glycosyl hydrolase 53 family protein | - |
| C2869_RS21955 () | 81234..82106 | - | 873 | WP_108605206.1 | diguanylate cyclase | - |
| C2869_RS21960 () | 82427..83062 | + | 636 | WP_108605207.1 | RpiB/LacA/LacB family sugar-phosphate isomerase | - |
| C2869_RS21965 () | 83542..84252 | + | 711 | WP_108605208.1 | FadR family transcriptional regulator | - |
| C2869_RS21970 () | 85523..86722 | + | 1200 | WP_108605209.1 | AAA family ATPase | - |
| C2869_RS21975 () | 86725..87660 | + | 936 | WP_108605210.1 | ParB/RepB/Spo0J family partition protein | - |
| C2869_RS21985 () | 90126..91823 | + | 1698 | WP_108605212.1 | hypothetical protein | - |
| C2869_RS21990 () | 92150..92419 | - | 270 | WP_108605213.1 | Txe/YoeB family addiction module toxin | - |
| C2869_RS21995 () | 92400..92672 | - | 273 | WP_108605214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| C2869_RS22000 () | 92993..93898 | - | 906 | WP_108605215.1 | hypothetical protein | - |
| C2869_RS22005 () | 94657..95139 | - | 483 | WP_108605216.1 | SWIM zinc finger family protein | - |
| C2869_RS22010 () | 95487..95648 | + | 162 | WP_159084283.1 | hypothetical protein | - |
| C2869_RS22015 () | 95671..96009 | - | 339 | WP_159084284.1 | type II toxin-antitoxin system YafO family toxin | - |
| C2869_RS22020 () | 96009..96461 | - | 453 | WP_159084285.1 | hypothetical protein | - |
| C2869_RS22025 () | 96936..98030 | + | 1095 | WP_108605220.1 | hypothetical protein | - |
| C2869_RS22030 () | 98525..102730 | + | 4206 | WP_199915709.1 | pectate trisaccharide-lyase | - |
| C2869_RS22035 () | 103147..105171 | - | 2025 | WP_108605221.1 | TonB-dependent receptor | - |
| C2869_RS22040 () | 105417..106139 | + | 723 | WP_108605222.1 | LamG domain-containing protein | - |
| C2869_RS22045 () | 106159..106923 | - | 765 | WP_108605223.1 | cytochrome b/b6 domain-containing protein | - |
| C2869_RS22050 () | 106896..107387 | - | 492 | WP_108605224.1 | cytochrome c | - |
| C2869_RS22055 () | 107750..108175 | - | 426 | WP_108605225.1 | hypothetical protein | - |
| C2869_RS22060 () | 108197..109645 | - | 1449 | WP_108605226.1 | DUF1501 domain-containing protein | - |
| C2869_RS22065 () | 109769..112108 | - | 2340 | WP_108605227.1 | DUF1549 and DUF1553 domain-containing protein | - |
| C2869_RS22070 () | 112770..113996 | + | 1227 | WP_108605228.1 | glycoside hydrolase family 88 protein | - |
| C2869_RS22075 () | 114179..115258 | + | 1080 | WP_108605229.1 | Ldh family oxidoreductase | - |
| C2869_RS22080 () | 115317..116558 | + | 1242 | WP_108605230.1 | glycoside hydrolase family 88 protein | - |
| C2869_RS22085 () | 116754..119018 | + | 2265 | WP_108605231.1 | carbohydrate binding family 9 domain-containing protein | - |
| C2869_RS22090 () | 119031..120044 | + | 1014 | WP_108605232.1 | extracellular solute-binding protein | - |
| C2869_RS22095 () | 120464..120712 | + | 249 | WP_108605233.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| C2869_RS22100 () | 120706..122022 | + | 1317 | WP_108605234.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| C2869_RS22720 () | 122612..125488 | - | 2877 | WP_199915706.1 | hypothetical protein | - |
| C2869_RS22110 () | 125728..126636 | - | 909 | WP_159084286.1 | diguanylate cyclase | - |
| C2869_RS22115 () | 126740..129193 | - | 2454 | WP_159084287.1 | hypothetical protein | - |
| C2869_RS22120 () | 129542..130972 | - | 1431 | WP_108605238.1 | glycoside hydrolase family 28 protein | - |
| C2869_RS22125 () | 131042..132340 | - | 1299 | WP_108605239.1 | TRAP transporter large permease | - |
| C2869_RS22130 () | 132349..132837 | - | 489 | WP_108605240.1 | TRAP transporter small permease | - |
| C2869_RS22135 () | 132840..133823 | - | 984 | WP_199915707.1 | TRAP transporter substrate-binding protein | - |
| C2869_RS22140 () | 133876..134718 | - | 843 | WP_108605242.1 | 5-dehydro-4-deoxy-D-glucuronate isomerase | - |
| C2869_RS22145 () | 134744..135508 | - | 765 | WP_108605243.1 | 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase | VF |
| C2869_RS22155 () | 135929..138382 | + | 2454 | WP_108605292.1 | DUF4861 family protein | - |
| C2869_RS22160 () | 139210..140445 | + | 1236 | WP_108605245.1 | group II intron reverse transcriptase/maturase | - |
| C2869_RS22165 () | 141040..141591 | + | 552 | WP_108605246.1 | YgjV family protein | - |
| C2869_RS22170 () | 141593..143104 | - | 1512 | WP_108605247.1 | Fic family protein | - |
| C2869_RS22175 () | 143355..144785 | - | 1431 | WP_108605248.1 | glucuronate isomerase | - |
| C2869_RS22180 () | 145023..145874 | + | 852 | WP_108605249.1 | hypothetical protein | - |
| C2869_RS22185 () | 145984..146232 | + | 249 | WP_108605250.1 | helix-turn-helix domain-containing protein | - |
| C2869_RS22190 () | 146536..148005 | - | 1470 | WP_108605251.1 | 6-phosphogluconate dehydrogenase, decarboxylating | VF |
| C2869_RS22195 () | 148224..149471 | - | 1248 | WP_108605252.1 | hypothetical protein | - |
| C2869_RS22200 () | 149538..150221 | - | 684 | WP_108605253.1 | sulfite exporter TauE/SafE family protein | - |
| C2869_RS22205 () | 150236..150910 | - | 675 | WP_108605254.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| C2869_RS22210 () | 150897..151709 | - | 813 | WP_108605255.1 | hypothetical protein | - |
| C2869_RS22215 () | 151759..153528 | - | 1770 | WP_159084288.1 | DUF2088 domain-containing protein | - |
| C2869_RS22220 () | 153774..154808 | + | 1035 | WP_108605257.1 | LacI family DNA-binding transcriptional regulator | - |
| C2869_RS22225 () | 155113..156684 | - | 1572 | WP_108605258.1 | Alkyl hydroperoxide reductase subunit F | VF |
| C2869_RS22230 () | 156909..157475 | - | 567 | WP_108605259.1 | peroxiredoxin | - |
| C2869_RS22235 () | 157663..158562 | + | 900 | WP_108605260.1 | Hydrogen peroxide-inducible genes activator | VF |
| C2869_RS22240 () | 159098..159292 | + | 195 | WP_108605261.1 | DUF4177 domain-containing protein | - |
| C2869_RS22245 () | 159416..160414 | - | 999 | WP_108605262.1 | family 43 glycosylhydrolase | - |
| C2869_RS22250 () | 160573..163581 | - | 3009 | WP_108605263.1 | hypothetical protein | VF |
| C2869_RS22540 () | 164004..164150 | - | 147 | WP_159084289.1 | hypothetical protein | - |
| C2869_RS22255 () | 164175..164438 | - | 264 | WP_108605264.1 | BrnA antitoxin family protein | - |
| C2869_RS22260 () | 164416..164550 | - | 135 | WP_108605265.1 | BrnT family toxin | - |
| C2869_RS22265 () | 164680..164916 | + | 237 | WP_199915708.1 | hypothetical protein | - |
| C2869_RS22270 () | 165084..165425 | - | 342 | WP_108605293.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C2869_RS22275 () | 165415..165633 | - | 219 | WP_108605266.1 | hypothetical protein | - |
| C2869_RS22280 () | 166035..167297 | + | 1263 | WP_108601012.1 | ISNCY family transposase ISAcif1 | Transposase |
| C2869_RS22285 () | 167548..168642 | + | 1095 | WP_159084290.1 | transposase | - |
| C2869_RS22290 () | 169135..169659 | - | 525 | WP_108605268.1 | hypothetical protein | - |
| C2869_RS22295 () | 169671..170672 | - | 1002 | WP_108605269.1 | hypothetical protein | - |
| C2869_RS22300 () | 171517..172752 | + | 1236 | WP_108601131.1 | group II intron reverse transcriptase/maturase | - |
| C2869_RS22305 () | 173003..174475 | - | 1473 | WP_108605270.1 | mannitol dehydrogenase family protein | - |
| C2869_RS22310 () | 174596..175363 | - | 768 | WP_108605271.1 | rhamnogalacturonan acetylesterase | - |
| C2869_RS22315 () | 175539..181739 | - | 6201 | WP_108605272.1 | pectate lyase | - |
| C2869_RS22320 () | 181804..184995 | - | 3192 | WP_108605273.1 | TonB-dependent receptor | - |
| C2869_RS22325 () | 186326..189745 | + | 3420 | WP_108605294.1 | pectin methylesterase | - |
| C2869_RS22330 () | 189862..190899 | + | 1038 | WP_108605274.1 | Lipase 2 | VF |
| C2869_RS22335 () | 190896..191042 | - | 147 | WP_159084291.1 | hypothetical protein | - |
| C2869_RS22340 () | 191078..191935 | - | 858 | WP_108605276.1 | hypothetical protein | - |
| C2869_RS22345 () | 192345..193955 | + | 1611 | WP_108605277.1 | polygalacturonase | - |
| C2869_RS22350 () | 194344..195624 | - | 1281 | WP_108605278.1 | serine hydrolase | - |
| C2869_RS22355 () | 195896..197074 | - | 1179 | WP_108605295.1 | pectate lyase | - |
| C2869_RS22360 () | 197275..198207 | + | 933 | WP_108605279.1 | hypothetical protein | - |
| C2869_RS22365 () | 198314..199279 | + | 966 | WP_108605280.1 | hypothetical protein | - |
| C2869_RS22370 () | 199424..200491 | + | 1068 | WP_108605281.1 | LacI family DNA-binding transcriptional regulator | - |
| C2869_RS22375 () | 201007..202488 | + | 1482 | WP_108605282.1 | sucrose phosphorylase | - |
| C2869_RS22380 () | 202575..202931 | + | 357 | WP_159084292.1 | helix-turn-helix domain-containing protein | - |
| C2869_RS22385 () | 203237..205648 | + | 2412 | WP_108605284.1 | TonB-dependent receptor | - |
| C2869_RS22390 () | 205733..206953 | + | 1221 | WP_108605285.1 | MFS transporter | - |
| C2869_RS22395 () | 206979..207893 | + | 915 | WP_108605286.1 | ROK family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|