MGE detailed information
MGE type: Conjugative plasmid MGE length: 100229 bp
Accession: NZ_CP026579 Location: 1..100229 Organism: Escherichia coli strain WCHEC005237 Replicon: plasmid pRmtB1_005237
Accession: NZ_CP026579 Location: 1..100229 Organism: Escherichia coli strain WCHEC005237 Replicon: plasmid pRmtB1_005237
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4E05_RS01535 () | 1..978 | + | 978 | WP_072652232.1 | RepB family plasmid replication initiator protein | - |
| C4E05_RS01540 () | 1263..1994 | - | 732 | WP_072652233.1 | tyrosine-type recombinase/integrase | - |
| C4E05_RS01545 () | 2224..2928 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C4E05_RS01550 () | 2982..3341 | + | 360 | Protein_3 | Tn3 family transposase TnpR_Tn3 | Transposase |
| C4E05_RS01555 () | 3524..4384 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| C4E05_RS01560 () | 4554..5309 | + | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| C4E05_RS01565 () | 5390..5575 | - | 186 | WP_046788536.1 | hypothetical protein | - |
| C4E05_RS01570 () | 5902..7443 | - | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| C4E05_RS01575 () | 7848..8687 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| C4E05_RS01580 () | 8681..9028 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| C4E05_RS01585 () | 9145..9990 | - | 846 | WP_001749984.1 | Streptomycin 3''-adenylyltransferase | ARG |
| C4E05_RS01590 () | 10171..10644 | - | 474 | WP_001749985.1 | Dihydrofolate reductase type 1 | ARG |
| C4E05_RS01595 () | 10777..11229 | - | 453 | WP_001749986.1 | hypothetical protein | ARG |
| C4E05_RS01600 () | 11326..11880 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| C4E05_RS01605 () | 12172..13185 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| C4E05_RS01615 () | 13388..13738 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| C4E05_RS01620 () | 13914..14474 | + | 561 | WP_001161490.1 | recombinase family protein | - |
| C4E05_RS01625 () | 14478..14756 | + | 279 | Protein_17 | DUF4158 domain-containing protein | - |
| C4E05_RS01630 () | 14928..15419 | - | 492 | Protein_18 | IS91 family transposase ISSbo1 | Transposase |
| C4E05_RS01635 () | 15493..15738 | + | 246 | WP_041937891.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| C4E05_RS01640 () | 15770..16420 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| C4E05_RS01645 () | 16526..17725 | + | 1200 | WP_000804064.1 | tetracycline efflux MFS transporter Tet(A) | - |
| C4E05_RS01650 () | 17757..18641 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| C4E05_RS01655 () | 18779..19186 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| C4E05_RS01660 () | 19175..20926 | + | 1752 | Protein_24 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| C4E05_RS01665 () | 21141..22913 | - | 1773 | WP_001262767.1 | DUF262 domain-containing protein | - |
| C4E05_RS01670 () | 23198..23599 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| C4E05_RS01675 () | 23532..23789 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| C4E05_RS01680 () | 23882..24535 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| C4E05_RS01690 () | 25474..26331 | - | 858 | WP_072652179.1 | incFII family plasmid replication initiator RepA | - |
| C4E05_RS01695 () | 26324..26398 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C4E05_RS01705 () | 26635..26889 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| C4E05_RS01710 () | 27129..27719 | - | 591 | WP_063101963.1 | DUF2726 domain-containing protein | - |
| C4E05_RS01715 () | 27758..27966 | - | 209 | Protein_33 | hemolysin expression modulator Hha | - |
| C4E05_RS01720 () | 28012..28473 | - | 462 | WP_072652178.1 | thermonuclease family protein | - |
| C4E05_RS01725 () | 28715..28927 | - | 213 | WP_072652177.1 | hypothetical protein | - |
| C4E05_RS01730 () | 29058..29618 | - | 561 | WP_000139345.1 | fertility inhibition protein FinO | - |
| C4E05_RS01735 () | 29673..30419 | - | 747 | WP_001825166.1 | conjugal transfer pilus acetylase TraX | - |
| C4E05_RS01740 () | 30439..35709 | - | 5271 | WP_072652176.1 | Multifunctional conjugation protein TraI | Relaxase |
| C4E05_RS01745 () | 35709..37880 | - | 2172 | WP_072652175.1 | type IV conjugative transfer system coupling protein TraD | - |
| C4E05_RS01750 () | 37931..38671 | - | 741 | WP_021514832.1 | hypothetical protein | - |
| C4E05_RS01755 () | 38874..39605 | - | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| C4E05_RS01760 () | 39654..40139 | - | 486 | WP_000605868.1 | hypothetical protein | - |
| C4E05_RS01765 () | 40155..42976 | - | 2822 | Protein_43 | conjugal transfer mating pair stabilization protein TraG | - |
| C4E05_RS01770 () | 42973..44346 | - | 1374 | WP_021532658.1 | conjugal transfer protein TraH | - |
| C4E05_RS01775 () | 44346..44708 | - | 363 | WP_071587080.1 | P-type conjugative transfer protein TrbJ | - |
| C4E05_RS01780 () | 44638..45183 | - | 546 | WP_044804936.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C4E05_RS01785 () | 45170..45451 | - | 282 | WP_000549795.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C4E05_RS01790 () | 45567..46310 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C4E05_RS01795 () | 46303..46560 | - | 258 | WP_148240113.1 | conjugal transfer protein TrbE | - |
| C4E05_RS01800 () | 46587..48437 | - | 1851 | WP_072652173.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C4E05_RS01805 () | 48434..49072 | - | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C4E05_RS01810 () | 49081..50073 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| C4E05_RS01815 () | 50070..50702 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| C4E05_RS01820 () | 50699..51085 | - | 387 | WP_000214096.1 | type-F conjugative transfer system protein TrbI | - |
| C4E05_RS01825 () | 51082..53712 | - | 2631 | WP_000069764.1 | type IV secretion system protein TraC | - |
| C4E05_RS01830 () | 53838..54200 | - | 363 | WP_000836675.1 | hypothetical protein | - |
| C4E05_RS01835 () | 54282..55250 | - | 969 | WP_013087110.1 | IS5 family transposase IS903B | Transposase |
| C4E05_RS01845 () | 55589..56062 | - | 474 | WP_053895102.1 | hypothetical protein | - |
| C4E05_RS01850 () | 56055..56468 | - | 414 | WP_000549581.1 | hypothetical protein | - |
| C4E05_RS01855 () | 56461..56682 | - | 222 | WP_072652238.1 | conjugal transfer protein TraR | - |
| C4E05_RS01860 () | 56817..57332 | - | 516 | WP_000809874.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C4E05_RS01865 () | 57329..57697 | - | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| C4E05_RS01870 () | 57636..58226 | - | 591 | WP_000002784.1 | conjugal transfer protein TraP | - |
| C4E05_RS01875 () | 58216..59643 | - | 1428 | WP_000146657.1 | conjugal transfer protein TraB | - |
| C4E05_RS01880 () | 59643..60347 | - | 705 | WP_148724787.1 | type-F conjugative transfer system secretin TraK | - |
| C4E05_RS01885 () | 60358..60924 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| C4E05_RS01890 () | 60946..61257 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| C4E05_RS01895 () | 61272..61631 | - | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| C4E05_RS01900 () | 61665..61892 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| C4E05_RS01905 () | 61986..62672 | - | 687 | WP_001825184.1 | PAS domain-containing protein | - |
| C4E05_RS01910 () | 62863..63246 | - | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| C4E05_RS01915 () | 63523..64170 | + | 648 | WP_000614935.1 | hypothetical protein | VF |
| C4E05_RS01920 () | 64467..65288 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| C4E05_RS01925 () | 65406..65693 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| C4E05_RS01930 () | 65718..65924 | - | 207 | WP_000547971.1 | hypothetical protein | - |
| C4E05_RS01945 () | 66615..66773 | - | 159 | WP_034169443.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 66817..67041 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 66817..67041 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 66817..67041 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 66817..67041 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| C4E05_RS25715 () | 66853..67041 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| C4E05_RS01950 () | 67053..67772 | - | 720 | WP_050858785.1 | plasmid SOS inhibition protein A | - |
| C4E05_RS01955 () | 67769..68203 | - | 435 | WP_032217500.1 | conjugation system SOS inhibitor PsiB | - |
| C4E05_RS01960 () | 68258..70216 | - | 1959 | WP_072652246.1 | ParB/RepB/Spo0J family partition protein | - |
| C4E05_RS01965 () | 70281..70514 | - | 234 | WP_000006030.1 | DUF905 family protein | - |
| C4E05_RS01970 () | 70576..71115 | - | 540 | WP_009426937.1 | single-stranded DNA-binding protein | - |
| C4E05_RS01975 () | 71141..71347 | - | 207 | WP_000547971.1 | hypothetical protein | - |
| C4E05_RS01995 () | 72015..72578 | - | 564 | WP_001470147.1 | class I SAM-dependent methyltransferase | - |
| C4E05_RS02000 () | 72626..73987 | - | 1362 | WP_050858699.1 | DUF3560 domain-containing protein | - |
| C4E05_RS02005 () | 74039..74269 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| C4E05_RS02015 () | 74785..75033 | + | 249 | WP_072048988.1 | hypothetical protein | - |
| C4E05_RS02025 () | 75305..75496 | - | 192 | WP_045177269.1 | hypothetical protein | - |
| C4E05_RS02030 () | 75493..75915 | - | 423 | WP_050858697.1 | DUF1380 family protein | - |
| C4E05_RS02035 () | 75962..76264 | - | 303 | WP_077793411.1 | antirestriction protein | - |
| C4E05_RS25720 () | 76800..77570 | - | 771 | WP_175393454.1 | hypothetical protein | - |
| C4E05_RS02050 () | 77615..78049 | - | 435 | WP_000274456.1 | DUF1380 family protein | - |
| C4E05_RS02055 () | 78063..78284 | - | 222 | WP_001104885.1 | hypothetical protein | - |
| C4E05_RS02060 () | 78285..78968 | - | 684 | WP_000086160.1 | DNA methylase | - |
| C4E05_RS02065 () | 79044..79349 | - | 306 | WP_032155763.1 | hypothetical protein | - |
| C4E05_RS02070 () | 79353..80255 | - | 903 | WP_077872020.1 | DUF1281 domain-containing protein | - |
| C4E05_RS02080 () | 80673..80921 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| C4E05_RS02085 () | 80918..81355 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C4E05_RS02090 () | 81355..82626 | + | 1272 | WP_064198699.1 | Y-family DNA polymerase | - |
| C4E05_RS02095 () | 82631..83023 | - | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| C4E05_RS02100 () | 83028..83999 | - | 972 | WP_001103697.1 | hypothetical protein | - |
| C4E05_RS02105 () | 84228..84872 | + | 645 | WP_000633913.1 | AAA family ATPase | - |
| C4E05_RS02110 () | 84866..85141 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| C4E05_RS02115 () | 85333..85759 | - | 427 | Protein_104 | tyrosine-type recombinase/integrase | - |
| C4E05_RS02120 () | 85939..86529 | + | 591 | Protein_105 | colicin-B | - |
| C4E05_RS02125 () | 86545..87242 | - | 698 | Protein_106 | IS1 family transposase | - |
| C4E05_RS02130 () | 87584..88873 | + | 1290 | WP_000824245.1 | MFS transporter | - |
| C4E05_RS02135 () | 88845..89870 | + | 1026 | WP_000864945.1 | zinc-binding alcohol dehydrogenase family protein | - |
| C4E05_RS02140 () | 89929..90600 | - | 672 | WP_046788564.1 | FadR family transcriptional regulator | - |
| C4E05_RS02145 () | 90695..91237 | - | 543 | Protein_110 | GGDEF domain-containing protein | - |
| C4E05_RS02150 () | 91254..91951 | - | 698 | Protein_111 | IS1 family transposase | - |
| C4E05_RS02155 () | 92003..92131 | - | 129 | Protein_112 | colicin M immunity protein | - |
| C4E05_RS02160 () | 92303..93112 | - | 810 | WP_000016963.1 | site-specific integrase | - |
| C4E05_RS02165 () | 93113..93418 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C4E05_RS02170 () | 93420..93638 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C4E05_RS02185 () | 94106..94801 | + | 696 | WP_072652234.1 | DNA-binding protein | - |
| C4E05_RS02190 () | 94798..95418 | + | 621 | WP_072652229.1 | hypothetical protein | - |
| C4E05_RS02195 () | 95415..96203 | + | 789 | WP_072652230.1 | DUF2971 domain-containing protein | - |
| C4E05_RS02200 () | 96239..96979 | + | 741 | WP_072652231.1 | abortive infection family protein | - |
| C4E05_RS02205 () | 97135..97323 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| C4E05_RS02210 () | 97333..98532 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| C4E05_RS02215 () | 98826..99455 | - | 630 | Protein_122 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|