MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 96994 bp
Accession: NZ_CP026570 Location: 1..96994 Organism: Salmonella enterica strain MFDS1004839 Replicon: plasmid pSE1004839
Accession: NZ_CP026570 Location: 1..96994 Organism: Salmonella enterica strain MFDS1004839 Replicon: plasmid pSE1004839
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MFDS1004839_RS23880 () | 1..705 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| MFDS1004839_RS23885 () | 759..959 | + | 201 | Protein_1 | DUF4113 domain-containing protein | - |
| MFDS1004839_RS23890 () | 1041..2015 | - | 975 | WP_000064277.1 | ParB/RepB/Spo0J family partition protein | - |
| MFDS1004839_RS23895 () | 2015..3220 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| MFDS1004839_RS23900 () | 3635..4576 | + | 942 | WP_000728919.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| MFDS1004839_RS23905 () | 4573..5178 | - | 606 | WP_000176303.1 | DUF2913 family protein | - |
| MFDS1004839_RS23910 () | 5235..5570 | - | 336 | WP_001527010.1 | hypothetical protein | - |
| MFDS1004839_RS23915 () | 5754..6170 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| MFDS1004839_RS23920 () | 6256..7371 | - | 1116 | WP_001247117.1 | DNA-binding protein | - |
| MFDS1004839_RS23925 () | 7629..8117 | + | 489 | WP_001135409.1 | hypothetical protein | - |
| MFDS1004839_RS23935 () | 8772..9512 | + | 741 | WP_001541566.1 | carbonic anhydrase | - |
| MFDS1004839_RS23940 () | 9735..10439 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| MFDS1004839_RS23950 () | 10547..11107 | + | 561 | WP_001240330.1 | recombinase family protein | - |
| MFDS1004839_RS23955 () | 11091..12755 | + | 1665 | WP_000098781.1 | IS481 family transposase | - |
| MFDS1004839_RS23960 () | 12688..13713 | + | 1026 | WP_077907510.1 | ExeA family protein | - |
| MFDS1004839_RS23965 () | 13902..14939 | - | 1038 | WP_001121400.1 | IS630 family transposase | - |
| MFDS1004839_RS23970 () | 15547..16440 | + | 894 | WP_000346690.1 | virulence genes transcriptional activator SpvR | - |
| MFDS1004839_RS23975 () | 16614..16778 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| MFDS1004839_RS23980 () | 16952..17719 | + | 768 | WP_001676649.1 | virulence protein SpvA | - |
| MFDS1004839_RS24805 () | 17682..17849 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| MFDS1004839_RS23985 () | 17901..19676 | + | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| MFDS1004839_RS23990 () | 19957..20682 | + | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| MFDS1004839_RS23995 () | 20943..21593 | + | 651 | WP_001676646.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| MFDS1004839_RS24000 () | 21720..22145 | - | 426 | WP_000064919.1 | IS200/IS605 family transposase | - |
| MFDS1004839_RS24005 () | 22202..22552 | + | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| MFDS1004839_RS24010 () | 22619..23178 | - | 560 | Protein_25 | inverse autotransporter beta domain-containing protein | - |
| MFDS1004839_RS24700 () | 23334..23621 | + | 288 | WP_071530243.1 | hypothetical protein | - |
| MFDS1004839_RS24020 () | 23898..24383 | - | 486 | WP_000905606.1 | membrane protein | - |
| MFDS1004839_RS24025 () | 24377..24886 | - | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| MFDS1004839_RS24035 () | 24890..25602 | - | 713 | Protein_29 | EAL domain-containing protein | - |
| MFDS1004839_RS24040 () | 25611..26393 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| MFDS1004839_RS24045 () | 26428..26949 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| MFDS1004839_RS24050 () | 26946..27236 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| MFDS1004839_RS24055 () | 27238..27543 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| MFDS1004839_RS24060 () | 27545..27763 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| MFDS1004839_RS24065 () | 28438..28959 | + | 522 | WP_077681952.1 | hypothetical protein | - |
| MFDS1004839_RS24810 () | 29003..29431 | - | 429 | Protein_36 | hypothetical protein | - |
| MFDS1004839_RS24075 () | 29443..29738 | + | 296 | Protein_37 | cytoplasmic protein | - |
| MFDS1004839_RS24080 () | 30232..31221 | + | 990 | WP_000461382.1 | RepB family plasmid replication initiator protein | - |
| MFDS1004839_RS24085 () | 31548..31709 | - | 162 | WP_015059604.1 | hypothetical protein | - |
| MFDS1004839_RS24090 () | 31762..32148 | - | 387 | WP_000751876.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| MFDS1004839_RS24095 () | 32515..32826 | - | 312 | WP_015059605.1 | hypothetical protein | - |
| MFDS1004839_RS24100 () | 32855..33157 | + | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| MFDS1004839_RS24105 () | 33432..33956 | + | 525 | WP_000748204.1 | fimbrial protein | - |
| MFDS1004839_RS24110 () | 34183..36590 | + | 2408 | Protein_44 | outer membrane usher protein PefC | - |
| MFDS1004839_RS24115 () | 36583..37275 | + | 693 | WP_001038509.1 | fimbrial chaperone PefD | - |
| MFDS1004839_RS24120 () | 37272..37850 | + | 579 | WP_000085742.1 | hypothetical protein | - |
| MFDS1004839_RS24125 () | 38033..38887 | + | 855 | WP_001680213.1 | hypothetical protein | - |
| MFDS1004839_RS24130 () | 39147..39359 | + | 213 | WP_000004289.1 | transcriptional regulator PefI | - |
| MFDS1004839_RS24135 () | 39344..39694 | + | 351 | WP_000135399.1 | helix-turn-helix transcriptional regulator | - |
| MFDS1004839_RS24140 () | 39938..40594 | + | 657 | WP_077907617.1 | DsbA family protein | - |
| MFDS1004839_RS24815 () | 40584..40730 | + | 147 | WP_001141717.1 | hypothetical protein | - |
| MFDS1004839_RS24145 () | 40781..41626 | + | 846 | WP_001701740.1 | YjiK family protein | - |
| MFDS1004839_RS24150 () | 41716..42273 | + | 558 | WP_000725064.1 | complement resistance protein Rck | - |
| MFDS1004839_RS24155 () | 42539..43285 | + | 747 | WP_000417897.1 | AraC family transcriptional regulator | - |
| MFDS1004839_RS24160 () | 43382..43603 | - | 222 | WP_071530245.1 | SdiA-regulated domain-containing protein | - |
| MFDS1004839_RS24170 () | 44459..45340 | - | 882 | WP_001676666.1 | incFII family plasmid replication initiator RepA | - |
| MFDS1004839_RS24175 () | 45321..45398 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| MFDS1004839_RS24180 () | 45648..45914 | - | 267 | WP_016710725.1 | replication regulatory protein RepA | - |
| MFDS1004839_RS24190 () | 46093..46528 | - | 436 | Protein_59 | phospholipase | - |
| MFDS1004839_RS24195 () | 46694..47146 | - | 453 | WP_000477657.1 | DSBA oxidoreductase | - |
| MFDS1004839_RS24200 () | 47263..47685 | - | 423 | Protein_61 | fertility inhibition protein FinO | - |
| MFDS1004839_RS24205 () | 47765..48279 | - | 515 | Protein_62 | type IV conjugative transfer system lipoprotein TraV | - |
| MFDS1004839_RS24215 () | 48354..49058 | - | 705 | WP_023327680.1 | IS6-like element IS26 family transposase | - |
| MFDS1004839_RS24220 () | 49124..49249 | - | 126 | Protein_64 | conjugal transfer protein | - |
| MFDS1004839_RS24225 () | 49254..49967 | - | 714 | WP_000394613.1 | type IV secretion system protein | - |
| MFDS1004839_RS24230 () | 50213..51346 | - | 1134 | WP_000513461.1 | type IV secretion system protein | - |
| MFDS1004839_RS24235 () | 51356..51583 | - | 228 | WP_000835348.1 | EexN family lipoprotein | - |
| MFDS1004839_RS24240 () | 51584..52342 | - | 759 | WP_000744205.1 | pilus assembly protein | - |
| MFDS1004839_RS24245 () | 52353..55106 | - | 2754 | WP_001354552.1 | VirB3 family type IV secretion system protein | - |
| MFDS1004839_RS24250 () | 55125..55420 | - | 296 | Protein_70 | TrbC/VirB2 family protein | - |
| MFDS1004839_RS24255 () | 55398..56045 | - | 648 | WP_000953532.1 | lytic transglycosylase domain-containing protein | - |
| MFDS1004839_RS24260 () | 56078..56290 | - | 213 | WP_000125172.1 | hypothetical protein | - |
| MFDS1004839_RS24265 () | 56220..56738 | - | 519 | WP_001446885.1 | transcription termination factor NusG | - |
| MFDS1004839_RS24270 () | 57091..58257 | - | 1167 | WP_000539539.1 | relaxase/mobilization nuclease domain-containing protein | - |
| MFDS1004839_RS24275 () | 58260..58805 | - | 546 | WP_000757692.1 | hypothetical protein | - |
| MFDS1004839_RS24820 () | 58800..58874 | - | 75 | Protein_76 | DNA distortion polypeptide 3 | - |
| MFDS1004839_RS24285 () | 59131..59403 | - | 273 | WP_000167280.1 | hypothetical protein | - |
| MFDS1004839_RS24295 () | 59636..59815 | - | 180 | WP_000439079.1 | hypothetical protein | - |
| MFDS1004839_RS24300 () | 59857..60186 | - | 330 | WP_000866654.1 | hypothetical protein | - |
| MFDS1004839_RS24305 () | 60280..60522 | - | 243 | WP_000008708.1 | hypothetical protein | - |
| MFDS1004839_RS24310 () | 60512..60724 | - | 213 | WP_001446884.1 | hypothetical protein | - |
| MFDS1004839_RS24315 () | 60790..61338 | - | 549 | WP_001178641.1 | hypothetical protein | - |
| MFDS1004839_RS24320 () | 61412..61927 | - | 516 | WP_001025387.1 | J domain-containing protein | - |
| MFDS1004839_RS24325 () | 62277..62558 | - | 282 | WP_000220561.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| MFDS1004839_RS24330 () | 62548..62799 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| MFDS1004839_RS24335 () | 63864..64733 | + | 870 | WP_001212191.1 | replication initiation protein | - |
| MFDS1004839_RS24340 () | 64738..65589 | + | 852 | WP_000435059.1 | replication initiation protein | - |
| MFDS1004839_RS24345 () | 65593..66038 | + | 446 | Protein_88 | hypothetical protein | - |
| MFDS1004839_RS24350 () | 66106..66528 | + | 423 | WP_000202950.1 | hypothetical protein | - |
| MFDS1004839_RS24360 () | 67066..68130 | - | 1065 | WP_000849600.1 | P-loop NTPase | - |
| MFDS1004839_RS24370 () | 68554..68784 | - | 231 | WP_000051066.1 | partitioning protein | - |
| MFDS1004839_RS24375 () | 68836..69456 | - | 621 | WP_000864788.1 | ParA family protein | - |
| MFDS1004839_RS24380 () | 69751..70395 | + | 645 | WP_000203205.1 | recombinase family protein | - |
| MFDS1004839_RS24385 () | 70544..70627 | - | 84 | WP_000565612.1 | hypothetical protein | - |
| MFDS1004839_RS24395 () | 71782..74784 | - | 3003 | Protein_95 | Tn3 family transposase | - |
| MFDS1004839_RS24400 () | 74948..75505 | + | 558 | WP_001235713.1 | recombinase family protein | - |
| MFDS1004839_RS24405 () | 75688..76548 | + | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| MFDS1004839_RS24410 () | 76758..77162 | + | 405 | Protein_98 | IS91 family transposase | - |
| MFDS1004839_RS24415 () | 77269..78105 | - | 837 | WP_000480972.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| MFDS1004839_RS24420 () | 78105..78908 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| MFDS1004839_RS24425 () | 78969..79784 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| MFDS1004839_RS24435 () | 80114..80290 | + | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| MFDS1004839_RS24440 () | 80472..81227 | - | 756 | Protein_103 | IS110-like element IS5075 family transposase | - |
| MFDS1004839_RS24445 () | 81280..81984 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| MFDS1004839_RS24450 () | 82049..83127 | - | 1079 | Protein_105 | translesion error-prone DNA polymerase V subunit UmuC | - |
| MFDS1004839_RS24455 () | 83127..83549 | - | 423 | WP_000925628.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| MFDS1004839_RS24460 () | 83820..85571 | + | 1752 | WP_001137853.1 | ParB/RepB/Spo0J family partition protein | - |
| MFDS1004839_RS24465 () | 85614..85778 | + | 165 | WP_001676653.1 | hypothetical protein | - |
| MFDS1004839_RS24470 () | 85715..86371 | + | 657 | Protein_109 | plasmid SOS inhibition protein A | - |
| MFDS1004839_RS24825 () | 86620..86778 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| MFDS1004839_RS24830 () | 86881..87699 | + | 819 | Protein_111 | DUF945 domain-containing protein | - |
| MFDS1004839_RS24480 () | 88010..88480 | - | 471 | WP_015056628.1 | transglycosylase SLT domain-containing protein | - |
| MFDS1004839_RS24490 () | 88896..89276 | + | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| MFDS1004839_RS24495 () | 89470..90155 | + | 686 | Protein_114 | PAS domain-containing protein | - |
| MFDS1004839_RS24500 () | 90249..90476 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| MFDS1004839_RS24505 () | 90518..90880 | + | 363 | WP_001274199.1 | type IV conjugative transfer system pilin TraA | - |
| MFDS1004839_RS24510 () | 90895..91206 | + | 312 | WP_000012130.1 | type IV conjugative transfer system protein TraL | - |
| MFDS1004839_RS24515 () | 91228..91794 | + | 567 | WP_001679518.1 | type IV conjugative transfer system protein TraE | - |
| MFDS1004839_RS24520 () | 91781..92521 | + | 741 | WP_001230718.1 | type-F conjugative transfer system secretin TraK | - |
| MFDS1004839_RS24525 () | 92521..93942 | + | 1422 | WP_000146697.1 | conjugal transfer protein TraB | - |
| MFDS1004839_RS24530 () | 93932..94528 | + | 597 | WP_000527901.1 | conjugal transfer protein TraP | - |
| MFDS1004839_RS24535 () | 94506..94739 | + | 234 | WP_096059430.1 | DUF2689 domain-containing protein | - |
| MFDS1004839_RS24540 () | 94776..95480 | + | 705 | WP_023327680.1 | IS6-like element IS26 family transposase | - |
| MFDS1004839_RS24550 () | 95624..96265 | - | 642 | WP_001011939.1 | type A-2 chloramphenicol O-acetyltransferase CatII | - |
| MFDS1004839_RS24555 () | 96415..96915 | - | 501 | WP_001239317.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|