MGE detailed information
MGE type: IScluster/Tn MGE length: 14604 bp
Accession: NZ_CP026494 Location: 103173..117776 Organism: Escherichia coli strain HS13-1 Replicon: plasmid pHS13-1-IncF
Accession: NZ_CP026494 Location: 103173..117776 Organism: Escherichia coli strain HS13-1 Replicon: plasmid pHS13-1-IncF
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C3K24_RS28480 () | 99536..101086 | + | 1551 | WP_001084509.1 | hypothetical protein | - |
| C3K24_RS28485 () | 101113..102075 | + | 963 | WP_000661609.1 | carbamate kinase family protein | - |
| C3K24_RS28490 () | 102911..104132 | - | 1222 | Protein_99 | ISL3 family transposase | - |
| C3K24_RS28500 () | 104232..104596 | + | 365 | Protein_100 | IS1 family transposase | - |
| C3K24_RS28505 () | 104651..105433 | - | 783 | WP_001442137.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| C3K24_RS28510 () | 105430..106452 | - | 1023 | WP_001310017.1 | IS21-like element IS100 family transposase | - |
| C3K24_RS28520 () | 106541..106888 | + | 348 | Protein_103 | IS1-like element IS1A family transposase | - |
| C3K24_RS28530 () | 107328..107615 | - | 288 | WP_000222760.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C3K24_RS28535 () | 107612..107863 | - | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C3K24_RS28540 () | 108758..110509 | - | 1752 | Protein_106 | Tn3-like element TnAs1 family transposase | - |
| C3K24_RS28545 () | 110498..110905 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| C3K24_RS28550 () | 111043..111927 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| C3K24_RS28555 () | 111959..113158 | - | 1200 | WP_001493765.1 | tetracycline efflux MFS transporter Tet(A) | - |
| C3K24_RS28560 () | 113264..113914 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| C3K24_RS28565 () | 113946..114188 | - | 243 | WP_000844627.1 | transposase | - |
| C3K24_RS28570 () | 114246..117212 | - | 2967 | WP_001138014.1 | Tn3-like element TnAs1 family transposase | - |
| C3K24_RS28575 () | 117216..117776 | - | 561 | WP_001161490.1 | recombinase family protein | - |
| C3K24_RS28580 () | 118086..119663 | + | 1578 | WP_001323889.1 | PAS domain-containing methyl-accepting chemotaxis protein | - |
| C3K24_RS28585 () | 119960..120817 | - | 858 | WP_019842754.1 | incFII family plasmid replication initiator RepA | - |
| C3K24_RS28590 () | 120810..121292 | - | 483 | WP_001273588.1 | hypothetical protein | - |
| C3K24_RS28595 () | 121285..121359 | - | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| C3K24_RS28605 () | 121591..121848 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| C3K24_RS28610 () | 122132..122338 | - | 207 | WP_001351576.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 122325..122386 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 122325..122386 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 122325..122386 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 122325..122386 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| C3K24_RS29660 () | 122642..122716 | - | 75 | Protein_120 | endonuclease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|