NZ_CP0264051..186884

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 186884 bp
Accession: NZ_CP026405        Location: 1..186884         Organism: Escherichia coli strain ECONIH4       Replicon: plasmid pECO-c85f


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C3F40_RS29940 () 81..749 - 669 WP_103216127.1 transmembrane anchor protein -
C3F40_RS29945 () 761..1495 - 735 WP_103216126.1 HupE/UreJ family protein -
C3F40_RS29950 () 1554..1910 - 357 WP_103216125.1 hypothetical protein -
C3F40_RS29955 () 1999..2286 + 288 WP_103216124.1 metal-sensing transcriptional repressor -
C3F40_RS29960 () 2295..3443 + 1149 WP_103216123.1 nickel/cobalt efflux protein RcnA -
C3F40_RS29965 () 4114..4584 - 471 WP_001281821.1 hypothetical protein -
C3F40_RS29970 () 4577..4948 - 372 WP_000516916.1 hypothetical protein -
C3F40_RS29975 () 4959..5153 - 195 WP_000343597.1 hypothetical protein -
C3F40_RS29985 () 5494..6042 - 549 WP_001061574.1 transcriptional regulator -
C3F40_RS29990 () 6205..6555 + 351 WP_000270043.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
C3F40_RS29995 () 6560..6862 + 303 WP_000124640.1 XRE family transcriptional regulator Antitoxin Detail
C3F40_RS30000 () 6889..7182 - 294 WP_001239997.1 chromosome segregation protein ParM -
C3F40_RS30005 () 7270..7542 - 273 WP_001043047.1 HU family DNA-binding protein -
C3F40_RS30010 () 7600..8127 - 528 WP_001236377.1 thermonuclease family protein -
C3F40_RS30015 () 8144..8332 - 189 WP_001270411.1 hypothetical protein -
C3F40_RS30020 () 8358..9215 - 858 WP_001167032.1 hypothetical protein -
C3F40_RS30025 () 9202..9432 - 231 WP_000972663.1 hypothetical protein -
C3F40_RS30030 () 9432..9950 - 519 WP_000210756.1 nitrite reductase -
C3F40_RS30035 () 9947..10393 - 447 WP_000919345.1 Fe3+-siderophore ABC transporter permease -
C3F40_RS30040 () 10393..10752 - 360 WP_000422768.1 hypothetical protein -
C3F40_RS30045 () 10809..11237 - 429 WP_000591074.1 hypothetical protein -
C3F40_RS30050 () 11271..12131 - 861 WP_000139698.1 DsbA family protein -
C3F40_RS30055 () 12147..13106 - 960 WP_000829616.1 S49 family peptidase -
C3F40_RS30060 () 13106..13960 - 855 WP_000539392.1 hypothetical protein -
C3F40_RS30065 () 13965..14258 - 294 WP_001370730.1 hypothetical protein -
C3F40_RS30070 () 14269..14742 - 474 WP_000057877.1 hypothetical protein -
C3F40_RS30075 () 14839..15360 - 522 WP_000805800.1 hypothetical protein -
C3F40_RS30080 () 15363..15884 - 522 WP_000393785.1 hypothetical protein -
C3F40_RS30085 () 15889..16497 - 609 WP_000849071.1 hypothetical protein -
C3F40_RS30090 () 16766..17881 + 1116 WP_000946102.1 phosphoadenosine phosphosulfate reductase family protein -
C3F40_RS30095 () 17899..18333 + 435 WP_000883925.1 hypothetical protein -
C3F40_RS30110 () 19370..20470 - 1101 WP_000350011.1 plasmid replication protein -
C3F40_RS30115 () 20455..20742 - 288 WP_000127321.1 hypothetical protein -
C3F40_RS30120 () 20747..21286 - 540 WP_001447712.1 hypothetical protein -
C3F40_RS30125 () 21785..22768 + 984 WP_000077458.1 ParM/StbA family protein -
C3F40_RS30130 () 22785..23078 + 294 WP_000919078.1 hypothetical protein -
C3F40_RS30135 () 23080..23499 + 420 WP_000651490.1 H-NS histone family protein -
C3F40_RS30140 () 23559..24110 - 552 WP_001020646.1 hypothetical protein -
C3F40_RS30145 () 24107..24715 - 609 WP_000891157.1 hypothetical protein -
C3F40_RS30150 () 24726..25259 - 534 WP_000790610.1 transglycosylase SLT domain-containing protein -
C3F40_RS30155 () 25259..25531 - 273 WP_000356489.1 helix-turn-helix domain-containing protein -
C3F40_RS30160 () 26247..26609 + 363 WP_000683483.1 hypothetical protein -
C3F40_RS30165 () 26647..30261 - 3615 WP_000534551.1 conjugal transfer protein TraG N-terminal domain-containing protein -
C3F40_RS30170 () 30274..31707 - 1434 WP_000256129.1 conjugal transfer protein TraH -
C3F40_RS30175 () 31709..32749 - 1041 WP_001326396.1 conjugal transfer protein TraF -
C3F40_RS30180 () 32860..34380 - 1521 WP_103216134.1 ATP-dependent helicase -
C3F40_RS30185 () 34418..37498 - 3081 WP_011787830.1 Tn3 family transposase -
C3F40_RS30190 () 37522..37833 - 312 WP_011918375.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
C3F40_RS30195 () 37833..38093 - 261 WP_011787805.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
C3F40_RS31400 () 38309..38476 - 168 Protein_49 IS6 family transposase -
C3F40_RS30210 () 38530..39234 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
C3F40_RS30215 () 39299..39661 - 363 Protein_51 class 1 integron integrase IntI1 -
C3F40_RS30220 () 39763..40614 + 852 WP_000946487.1 sulfonamide-resistant dihydropteroate synthase Sul1 -
C3F40_RS30230 () 40742..41242 + 501 WP_000376623.1 GNAT family N-acetyltransferase -
C3F40_RS30235 () 41367..42977 - 1611 WP_011787758.1 IS1634-like element ISSpu7 family transposase -
C3F40_RS30240 () 43185..43967 - 783 WP_001163403.1 IS21-like element IS1326 family helper ATPase IstB -
C3F40_RS30245 () 43957..45480 - 1524 WP_001324342.1 IS21-like element IS1326 family transposase -
C3F40_RS30250 () 45603..47147 + 1545 WP_000287615.1 IS3 family transposase -
C3F40_RS30255 () 47198..48058 - 861 WP_000344784.1 TniB family NTP-binding protein -
C3F40_RS30260 () 48061..49740 - 1680 WP_000179844.1 DDE-type integrase/transposase/recombinase -
C3F40_RS30270 () 49815..50483 - 669 WP_001300294.1 EAL domain-containing protein -
C3F40_RS30275 () 50519..50755 - 237 WP_000993386.1 broad-spectrum mercury transporter MerE -
C3F40_RS30280 () 50752..51114 - 363 WP_001277456.1 mercury resistance co-regulator MerD -
C3F40_RS30285 () 51132..52826 - 1695 WP_015063453.1 mercury(II) reductase -
C3F40_RS30290 () 52865..53290 - 426 WP_000522996.1 organomercurial transporter MerC -
C3F40_RS30295 () 53318..53593 - 276 WP_000732275.1 mercury resistance system periplasmic binding protein MerP -
C3F40_RS30300 () 53609..53974 - 366 WP_001294656.1 mercuric ion transporter MerT -
C3F40_RS30305 () 54046..54501 + 456 WP_001166628.1 Hg(II)-responsive transcriptional regulator -
C3F40_RS30310 () 54535..55851 + 1317 Protein_68 RHS repeat-associated core domain-containing protein -
C3F40_RS30315 () 55848..56120 + 273 WP_000787563.1 MafI family immunity protein -
C3F40_RS31405 () 56125..56367 + 243 WP_000750746.1 hypothetical protein -
C3F40_RS30320 () 56415..56714 + 300 WP_011872911.1 hypothetical protein -
C3F40_RS30325 () 56881..57333 + 453 WP_000791469.1 hypothetical protein -
C3F40_RS30330 () 57349..57951 - 603 WP_000278322.1 hypothetical protein -
C3F40_RS30335 () 58213..58494 + 282 WP_000575657.1 hypothetical protein -
C3F40_RS30345 () 58793..59329 + 537 WP_000949433.1 hypothetical protein -
C3F40_RS30350 () 59332..60342 + 1011 WP_000543934.1 tyrosine-type recombinase/integrase -
C3F40_RS30355 () 60347..61216 + 870 WP_000997323.1 3'-5' exonuclease -
C3F40_RS30360 () 61213..61704 + 492 WP_000139717.1 hypothetical protein -
C3F40_RS30365 () 62031..62906 + 876 WP_001097010.1 DNA replication terminus site-binding protein -
C3F40_RS30370 () 63059..63202 + 144 Protein_80 DNA-binding protein -
C3F40_RS30375 () 63253..63957 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
C3F40_RS30380 () 64068..65678 - 1611 WP_011787758.1 IS1634-like element ISSpu7 family transposase -
C3F40_RS30385 () 65775..66692 - 918 WP_104457635.1 Mph(E) family macrolide 2'-phosphotransferase -
C3F40_RS30390 () 66748..68223 - 1476 WP_000052512.1 ABC-F type ribosomal protection protein Msr(E) -
C3F40_RS30400 () 68637..69341 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
C3F40_RS30410 () 69518..70282 - 765 WP_001389365.1 IS6-like element IS6100 family transposase -
C3F40_RS30425 () 70457..71296 - 840 WP_000259032.1 sulfonamide-resistant dihydropteroate synthase Sul1 -
C3F40_RS30430 () 71290..71499 - 210 Protein_88 QacE family quaternary ammonium compound efflux SMR transporter -
C3F40_RS30435 () 71496..72152 - 657 WP_012579084.1 quinolone resistance pentapeptide repeat protein QnrA1 -
C3F40_RS30440 () 72485..74026 - 1542 WP_000050481.1 IS91 family transposase -
C3F40_RS30445 () 74431..75270 - 840 WP_000259032.1 sulfonamide-resistant dihydropteroate synthase Sul1 -
C3F40_RS30450 () 75264..75611 - 348 WP_000679427.1 quaternary ammonium compound efflux SMR transporter QacE delta 1 -
C3F40_RS30455 () 75775..76566 - 792 WP_001206356.1 ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2 -
C3F40_RS30460 () 76712..77725 + 1014 WP_000845039.1 class 1 integron integrase IntI1 -
C3F40_RS30470 () 78031..78588 + 558 WP_001162012.1 recombinase family protein -
C3F40_RS30475 () 78591..81563 + 2973 WP_001138073.1 Tn3 family transposase -
C3F40_RS30480 () 81642..82646 + 1005 WP_000427623.1 IS110-like element IS4321 family transposase -
C3F40_RS30485 () 82914..85766 - 2853 Protein_98 type IV secretion protein Rhs -
C3F40_RS30490 () 86007..86732 - 726 WP_000988732.1 hypothetical protein -
C3F40_RS30495 () 86846..87220 - 375 WP_000868821.1 hypothetical protein -
C3F40_RS31645 () 87341..87457 - 117 WP_000338626.1 hypothetical protein -
C3F40_RS30500 () 87467..87706 - 240 WP_000714162.1 permease -
C3F40_RS30505 () 87779..88057 - 279 WP_000268337.1 hypothetical protein -
C3F40_RS30510 () 88044..89771 - 1728 WP_000122923.1 toprim domain-containing protein -
C3F40_RS30515 () 89949..90335 - 387 WP_001077335.1 hypothetical protein -
C3F40_RS30520 () 90793..91644 - 852 WP_000595210.1 hypothetical protein -
C3F40_RS30525 () 91719..92276 - 558 WP_000064432.1 hypothetical protein -
C3F40_RS30530 () 92350..92568 - 219 WP_000260293.1 hypothetical protein -
C3F40_RS30535 () 92582..92851 - 270 WP_000184110.1 hypothetical protein -
C3F40_RS30540 () 92844..93449 - 606 WP_000071870.1 5'-deoxynucleotidase -
C3F40_RS30545 () 93521..93724 - 204 WP_000050848.1 hypothetical protein -
C3F40_RS30550 () 93926..96379 - 2454 WP_001187970.1 phosphoadenosine phosphosulfate reductase -
C3F40_RS30555 () 96467..96853 - 387 WP_000042274.1 hypothetical protein -
C3F40_RS30560 () 97086..97640 - 555 WP_001093868.1 hypothetical protein -
C3F40_RS30565 () 97714..98145 - 432 WP_000687894.1 hypothetical protein -
C3F40_RS30570 () 98206..99831 - 1626 WP_000201432.1 DNA cytosine methyltransferase -
C3F40_RS30575 () 99909..100211 - 303 WP_000410925.1 hypothetical protein -
C3F40_RS30580 () 100289..100633 - 345 WP_000209093.1 hypothetical protein -
C3F40_RS30585 () 100825..101202 - 378 WP_001337696.1 hypothetical protein -
C3F40_RS30590 () 101247..101438 - 192 WP_000651508.1 hypothetical protein -
C3F40_RS31410 () 101456..101698 + 243 WP_002210529.1 hypothetical protein -
C3F40_RS30600 () 101776..102228 - 453 WP_001176699.1 hypothetical protein -
C3F40_RS30605 () 102218..102607 - 390 WP_000026577.1 hypothetical protein -
C3F40_RS30610 () 102669..102893 - 225 WP_001102700.1 2Fe-2S ferredoxin-like protein -
C3F40_RS30615 () 102959..103843 - 885 WP_000477209.1 hypothetical protein -
C3F40_RS30620 () 103917..104417 - 501 WP_000793769.1 hypothetical protein -
C3F40_RS30625 () 104508..105047 - 540 WP_000018872.1 hypothetical protein -
C3F40_RS30630 () 105312..105647 - 336 WP_001071288.1 hypothetical protein -
C3F40_RS30635 () 105709..107505 - 1797 WP_000039318.1 VWA domain-containing protein -
C3F40_RS30640 () 107590..108867 - 1278 WP_000170086.1 DUF3150 domain-containing protein -
C3F40_RS30650 () 109067..110077 - 1011 WP_000706865.1 YqaJ viral recombinase family protein -
C3F40_RS30655 () 110140..111129 - 990 WP_001282585.1 phage recombination protein Bet -
C3F40_RS30660 () 111224..111754 - 531 WP_000987165.1 single-stranded DNA-binding protein -
C3F40_RS30665 () 111815..112723 - 909 WP_000739139.1 hypothetical protein -
C3F40_RS30670 () 112734..113702 - 969 WP_000085162.1 CbbQ/NirQ/NorQ C-terminal domain-containing protein -
C3F40_RS30675 () 113922..114107 - 186 WP_001186917.1 hypothetical protein -
C3F40_RS30680 () 114411..114731 - 321 WP_000547566.1 hypothetical protein -
C3F40_RS30685 () 115025..115666 + 642 WP_000796664.1 hypothetical protein -
C3F40_RS30690 () 115789..116649 + 861 WP_000709517.1 hypothetical protein -
C3F40_RS30695 () 116688..119498 - 2811 WP_001909286.1 conjugal transfer mating pair stabilization protein TraN -
C3F40_RS30700 () 119602..120609 - 1008 WP_000983283.1 TraU family protein -
C3F40_RS30705 () 120606..121277 - 672 WP_001337754.1 EAL domain-containing protein -
C3F40_RS30710 () 121274..122539 - 1266 WP_000621288.1 conjugal transfer protein TraW -
C3F40_RS30715 () 122502..123032 - 531 WP_001010738.1 S26 family signal peptidase -
C3F40_RS30720 () 123029..123346 - 318 WP_000351984.1 hypothetical protein -
C3F40_RS30725 () 123361..125808 - 2448 WP_000637386.1 type IV secretion system protein TraC -
C3F40_RS30730 () 125805..126512 - 708 WP_001259347.1 DsbC family protein -
C3F40_RS30735 () 126661..132192 - 5532 WP_000606833.1 DUF4165 domain-containing protein -
C3F40_RS30740 () 132393..132785 - 393 WP_000479535.1 hypothetical protein -
C3F40_RS30745 () 132789..133367 - 579 WP_000793435.1 type IV conjugative transfer system lipoprotein TraV -
C3F40_RS30750 () 133364..134677 - 1314 WP_024131605.1 conjugal transfer protein TraB -
C3F40_RS30755 () 134677..135594 - 918 WP_000794249.1 type-F conjugative transfer system secretin TraK -
C3F40_RS30760 () 135578..136204 - 627 WP_001049716.1 hypothetical protein -
C3F40_RS30765 () 136201..136482 - 282 WP_000805625.1 type IV conjugative transfer system protein TraL -
C3F40_RS30770 () 136627..137004 - 378 WP_000509509.1 hypothetical protein -
C3F40_RS31650 () 137004..137147 - 144 WP_001275801.1 hypothetical protein -
C3F40_RS30775 () 137328..137990 - 663 WP_001231463.1 hypothetical protein -
C3F40_RS30780 () 137990..138367 - 378 WP_000869261.1 hypothetical protein -
C3F40_RS30785 () 138377..138823 - 447 WP_000122506.1 hypothetical protein -
C3F40_RS30790 () 138833..139462 - 630 WP_000743450.1 DUF4400 domain-containing protein -
C3F40_RS30795 () 139419..140003 - 585 WP_000332866.1 hypothetical protein -
C3F40_RS30800 () 140014..141879 - 1866 WP_000178856.1 conjugative transfer system coupling protein TraD -
C3F40_RS30805 () 141876..144854 - 2979 WP_001337757.1 TraI domain-containing protein -
C3F40_RS30810 () 145022..145639 + 618 WP_001249396.1 hypothetical protein -
C3F40_RS30815 () 145621..145854 + 234 WP_001191892.1 hypothetical protein -
C3F40_RS30820 () 145854..148046 + 2193 WP_000366821.1 DNA topoisomerase 3 -
C3F40_RS30825 () 148061..148549 + 489 WP_000468105.1 hypothetical protein -
C3F40_RS30830 () 148641..148940 - 300 WP_000542259.1 hypothetical protein -
C3F40_RS30840 () 149152..149769 - 618 WP_000464631.1 hypothetical protein -
C3F40_RS30845 () 149863..150081 - 219 WP_000362482.1 hypothetical protein -
C3F40_RS30850 () 150287..150943 - 657 WP_000268551.1 hypothetical protein -
C3F40_RS30855 () 150943..152370 - 1428 WP_000936896.1 DNA cytosine methyltransferase -
C3F40_RS30860 () 152374..152874 - 501 WP_000647189.1 hypothetical protein -
C3F40_RS30865 () 152883..153194 - 312 WP_002210541.1 hypothetical protein -
C3F40_RS30870 () 153200..153631 - 432 WP_005507681.1 hypothetical protein -
C3F40_RS30875 () 153699..154373 - 675 WP_000344151.1 thymidylate kinase -
C3F40_RS30880 () 154348..154629 - 282 WP_000044824.1 hypothetical protein -
C3F40_RS30885 () 154622..154999 - 378 WP_001125905.1 hypothetical protein -
C3F40_RS31415 () 155318..155461 + 144 WP_000939033.1 hypothetical protein -
C3F40_RS30890 () 155553..156188 + 636 WP_000074431.1 N-6 DNA methylase -
C3F40_RS30895 () 156241..156513 - 273 WP_000703827.1 helix-turn-helix domain-containing protein -
C3F40_RS30900 () 156562..157743 - 1182 WP_001207227.1 ParB/RepB/Spo0J family partition protein -
C3F40_RS30905 () 157747..158532 - 786 WP_001151304.1 ParA family protein -
C3F40_RS30910 () 158706..159017 - 312 WP_000338945.1 hypothetical protein -
C3F40_RS30915 () 158999..159448 - 450 WP_000058870.1 hypothetical protein -
C3F40_RS30920 () 159462..160496 - 1035 WP_001050849.1 site-specific DNA-methyltransferase -
C3F40_RS30925 () 160741..162282 + 1542 WP_001274811.1 IS21-like element ISAs29 family transposase -
C3F40_RS30930 () 162297..163052 + 756 WP_000194038.1 IS21-like element ISAs29 family helper ATPase IstB -
C3F40_RS30935 () 163112..163324 - 213 WP_000098292.1 hypothetical protein -
C3F40_RS30940 () 163317..163679 - 363 WP_001258027.1 hypothetical protein -
C3F40_RS30945 () 163682..163924 - 243 WP_001096362.1 hypothetical protein -
C3F40_RS30955 () 164162..164359 - 198 WP_000532167.1 hypothetical protein -
C3F40_RS30960 () 164359..165297 - 939 WP_000268395.1 hypothetical protein -
C3F40_RS30965 () 165414..165959 - 546 WP_000435224.1 hypothetical protein -
C3F40_RS30970 () 165962..166531 - 570 WP_001256128.1 hypothetical protein -
C3F40_RS30975 () 166543..166761 - 219 WP_000056203.1 hypothetical protein -
C3F40_RS30985 () 167100..167528 - 429 WP_000988987.1 hypothetical protein -
C3F40_RS30990 () 167525..167872 - 348 WP_000039129.1 hypothetical protein -
C3F40_RS31000 () 168096..168932 - 837 WP_019706040.1 IS5-like element ISEc61 family transposase -
C3F40_RS31420 () 169034..169186 - 153 WP_016808107.1 hypothetical protein -
C3F40_RS31005 () 169679..170254 - 576 WP_001173919.1 recombinase family protein -
C3F40_RS31010 () 170381..170629 - 249 WP_012585400.1 type II toxin-antitoxin system YafQ family toxin -
C3F40_RS31015 () 171351..172298 - 948 WP_019706001.1 IS30-like element ISAs2 family transposase -
C3F40_RS31025 () 172461..172820 - 360 WP_000349358.1 BLMT family bleomycin binding protein -
C3F40_RS31030 () 172847..173641 - 795 WP_000262467.1 APH(3')-II family aminoglycoside O-phosphotransferase -
C3F40_RS31040 () 174207..175043 + 837 WP_019706040.1 IS5-like element ISEc61 family transposase -
C3F40_RS31045 () 175051..176049 - 999 WP_000245299.1 hypothetical protein -
C3F40_RS31050 () 176043..176237 - 195 WP_000757530.1 DUF2997 domain-containing protein -
C3F40_RS31055 () 176286..176678 - 393 WP_000018404.1 hypothetical protein -
C3F40_RS31060 () 176683..177012 - 330 WP_000277953.1 hypothetical protein -
C3F40_RS31065 () 177168..178631 - 1464 WP_001280522.1 AAA family ATPase -
C3F40_RS31070 () 178705..179637 - 933 WP_000434071.1 hypothetical protein -
C3F40_RS31080 () 180199..180696 - 498 WP_000062185.1 hypothetical protein -
C3F40_RS31085 () 180699..181187 - 489 WP_001273096.1 DUF1643 domain-containing protein -
C3F40_RS31090 () 181284..181535 + 252 Protein_215 hypothetical protein -
C3F40_RS31095 () 181657..182397 - 741 WP_103216133.1 IS21-like element helper ATPase IstB -
C3F40_RS31100 () 182387..183952 - 1566 WP_103216132.1 IS21 family transposase -
C3F40_RS31105 () 184151..184429 - 279 WP_158649784.1 helix-turn-helix domain-containing protein -
C3F40_RS31110 () 184499..185158 + 660 WP_103216130.1 helix-turn-helix domain-containing protein -
C3F40_RS31115 () 185184..185756 + 573 WP_103216129.1 hypothetical protein -
C3F40_RS31120 () 186011..186814 - 804 WP_158649783.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance