MGE detailed information
MGE type: Conjugative plasmid MGE length: 144072 bp
Accession: NZ_CP026396 Location: 1..144072 Organism: Klebsiella pneumoniae strain KPNIH48 Replicon: plasmid pKPN-8c6e
Accession: NZ_CP026396 Location: 1..144072 Organism: Klebsiella pneumoniae strain KPNIH48 Replicon: plasmid pKPN-8c6e
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C3F39_RS29320 () | 424..1644 | - | 1221 | WP_101883330.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| C3F39_RS29325 () | 1641..2924 | - | 1284 | WP_101883331.1 | phenylacetate--CoA ligase family protein | - |
| C3F39_RS29330 () | 2921..3835 | - | 915 | WP_101883340.1 | TauD/TfdA family dioxygenase | - |
| C3F39_RS29335 () | 3925..7035 | - | 3111 | WP_101883332.1 | non-ribosomal peptide synthetase | - |
| C3F39_RS29340 () | 7044..7529 | - | 486 | WP_104457653.1 | hypothetical protein | - |
| C3F39_RS29345 () | 7613..8593 | + | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| C3F39_RS29355 () | 8840..13861 | - | 5022 | WP_101883334.1 | Linear gramicidin synthase subunit B | VF |
| C3F39_RS29360 () | 13875..21464 | - | 7590 | WP_158236899.1 | Phthiocerol synthesis polyketide synthase type I PpsE | VF |
| C3F39_RS29365 () | 21457..22239 | - | 783 | WP_101883336.1 | Surfactin synthase thioesterase subunit | VF |
| C3F39_RS29370 () | 22318..23538 | - | 1221 | WP_101883337.1 | MFS transporter | - |
| C3F39_RS29380 () | 24049..24522 | + | 474 | Protein_11 | hypothetical protein | - |
| C3F39_RS32800 () | 24640..25122 | + | 483 | Protein_12 | DNA-binding protein | - |
| C3F39_RS29390 () | 25280..26005 | + | 726 | WP_101883342.1 | hypothetical protein | - |
| C3F39_RS29395 () | 26255..27658 | + | 1404 | WP_004883460.1 | ISNCY family transposase ISKpn21 | Transposase |
| C3F39_RS29400 () | 27687..28319 | - | 633 | WP_064157089.1 | hypothetical protein | - |
| C3F39_RS29405 () | 28648..29814 | - | 1167 | WP_087859135.1 | pyridoxal phosphate-dependent aminotransferase | - |
| C3F39_RS29410 () | 30195..31613 | + | 1419 | WP_087851471.1 | hypothetical protein | - |
| C3F39_RS29415 () | 31675..32979 | + | 1305 | WP_087859136.1 | KamA family radical SAM protein | - |
| C3F39_RS29420 () | 32979..34424 | + | 1446 | WP_087859137.1 | class I tRNA ligase family protein | - |
| C3F39_RS29425 () | 34402..35571 | + | 1170 | WP_087859138.1 | MFS transporter | - |
| C3F39_RS29430 () | 35568..35810 | + | 243 | WP_087851463.1 | hypothetical protein | - |
| C3F39_RS29435 () | 35852..36075 | - | 224 | Protein_22 | IS1 family transposase | - |
| C3F39_RS29440 () | 36083..36313 | - | 231 | WP_101883343.1 | DUF4113 domain-containing protein | - |
| C3F39_RS29445 () | 36565..37179 | - | 615 | WP_087859140.1 | DUF2913 family protein | - |
| C3F39_RS29450 () | 37274..40303 | - | 3030 | WP_032432545.1 | Tn3 family transposase ISPsy42 | Transposase |
| C3F39_RS29455 () | 40287..40889 | - | 603 | WP_010465829.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| C3F39_RS29460 () | 41081..41437 | + | 357 | WP_000182276.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C3F39_RS29465 () | 41439..41774 | + | 336 | WP_001172026.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| C3F39_RS29470 () | 41789..42124 | + | 336 | WP_000741275.1 | hypothetical protein | - |
| C3F39_RS29475 () | 42148..42474 | + | 327 | WP_000091614.1 | hypothetical protein | - |
| C3F39_RS29480 () | 42471..42851 | + | 381 | WP_001054412.1 | hypothetical protein | - |
| C3F39_RS29485 () | 42969..44228 | + | 1260 | WP_104457654.1 | HD-GYP domain-containing protein | - |
| C3F39_RS29490 () | 44813..45808 | + | 996 | WP_020326536.1 | IS110 family transposase IS1663 | Transposase |
| C3F39_RS29495 () | 45944..46273 | - | 330 | WP_104457655.1 | hypothetical protein | - |
| C3F39_RS29500 () | 46189..49086 | - | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| C3F39_RS29505 () | 49181..49786 | + | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| C3F39_RS29510 () | 49802..50248 | - | 447 | WP_104457656.1 | hypothetical protein | - |
| C3F39_RS29520 () | 51433..52446 | - | 1014 | WP_015065551.1 | replication protein | - |
| C3F39_RS29525 () | 52439..52990 | - | 552 | WP_022631532.1 | hypothetical protein | - |
| C3F39_RS29530 () | 52983..53060 | - | 78 | WP_014386216.1 | RepA leader peptide Tap | - |
| C3F39_RS29535 () | 53272..53541 | - | 270 | WP_022631531.1 | replication regulatory protein RepA | - |
| C3F39_RS29540 () | 53677..53817 | - | 141 | Protein_42 | phospholipase D family protein | - |
| C3F39_RS29545 () | 53914..54363 | - | 450 | WP_032713666.1 | hypothetical protein | - |
| C3F39_RS29550 () | 54353..56290 | - | 1938 | WP_032713668.1 | hypothetical protein | - |
| C3F39_RS29555 () | 56287..58086 | - | 1800 | WP_032713670.1 | site-specific integrase | - |
| C3F39_RS29560 () | 58083..59276 | - | 1194 | WP_032713672.1 | tyrosine-type recombinase/integrase | - |
| C3F39_RS29565 () | 59442..60479 | - | 1038 | Protein_47 | Toxin RTX-I translocation ATP-binding protein | VF |
| C3F39_RS29570 () | 60529..62121 | - | 1593 | WP_039264109.1 | IS66 family transposase ISEcl6 | Transposase |
| C3F39_RS29575 () | 62152..62502 | - | 351 | WP_021567584.1 | IS66 family transposase ISEcl6 | Transposase |
| C3F39_RS29580 () | 62499..62861 | - | 363 | WP_064733123.1 | IS66 family transposase ISCro1 | Transposase |
| C3F39_RS29585 () | 62994..64148 | - | 1155 | Protein_51 | peptidase domain-containing ABC transporter | - |
| C3F39_RS29590 () | 64148..65401 | - | 1254 | WP_032713779.1 | HlyD family secretion protein | - |
| C3F39_RS29595 () | 65404..66045 | - | 642 | WP_044060787.1 | CPBP family intramembrane metalloprotease | - |
| C3F39_RS29605 () | 66275..66649 | - | 375 | WP_072001172.1 | hypothetical protein | - |
| C3F39_RS29610 () | 67096..67446 | - | 351 | Protein_55 | phospholipase D family protein | - |
| C3F39_RS29615 () | 67622..67930 | - | 309 | WP_015065549.1 | hypothetical protein | - |
| C3F39_RS29620 () | 67927..68577 | - | 651 | WP_014343480.1 | DUF2726 domain-containing protein | - |
| C3F39_RS29625 () | 68633..69277 | - | 645 | WP_004153014.1 | hypothetical protein | - |
| C3F39_RS29630 () | 69327..69929 | - | 603 | WP_015065545.1 | hypothetical protein | - |
| C3F39_RS29635 () | 70090..70683 | - | 594 | WP_015065544.1 | fertility inhibition protein FinO | - |
| C3F39_RS29640 () | 70839..71564 | - | 726 | WP_015065543.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| C3F39_RS29645 () | 71644..76905 | - | 5262 | WP_100645014.1 | Multifunctional conjugation protein TraI | Relaxase |
| C3F39_RS29650 () | 76905..79217 | - | 2313 | Protein_63 | type IV conjugative transfer system coupling protein TraD | - |
| C3F39_RS33970 () | 79344..80033 | - | 690 | WP_013023831.1 | hypothetical protein | - |
| C3F39_RS29660 () | 80226..80957 | - | 732 | WP_004152622.1 | complement resistance protein TraT | - |
| C3F39_RS29665 () | 81141..81689 | - | 549 | WP_004152623.1 | conjugal transfer entry exclusion protein TraS | - |
| C3F39_RS29670 () | 81702..84551 | - | 2850 | WP_004152624.1 | conjugal transfer mating pair stabilization protein TraG | - |
| C3F39_RS29675 () | 84551..85930 | - | 1380 | WP_075995129.1 | F-type conjugal transfer protein TraH | - |
| C3F39_RS29680 () | 85908..86351 | - | 444 | WP_004194305.1 | F-type conjugal transfer protein TrbF | - |
| C3F39_RS29685 () | 86397..86954 | - | 558 | WP_013214031.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C3F39_RS29690 () | 86926..87165 | - | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C3F39_RS29695 () | 87176..87928 | - | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C3F39_RS29700 () | 87949..88275 | - | 327 | WP_004152676.1 | hypothetical protein | - |
| C3F39_RS29705 () | 88288..88536 | - | 249 | WP_004152675.1 | hypothetical protein | - |
| C3F39_RS29710 () | 88514..88768 | - | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| C3F39_RS29715 () | 88800..90755 | - | 1956 | WP_022644932.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C3F39_RS29720 () | 90814..91452 | - | 639 | WP_022644933.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C3F39_RS29725 () | 91465..92454 | - | 990 | WP_015632509.1 | conjugal transfer pilus assembly protein TraU | - |
| C3F39_RS29730 () | 92451..92852 | - | 402 | WP_022644934.1 | hypothetical protein | - |
| C3F39_RS29735 () | 92887..93522 | - | 636 | WP_020325113.1 | type-F conjugative transfer system protein TraW | - |
| C3F39_RS29740 () | 93519..93911 | - | 393 | WP_022644935.1 | type-F conjugative transfer system protein TrbI | - |
| C3F39_RS29745 () | 93911..96550 | - | 2640 | WP_022644936.1 | type IV secretion system protein TraC | - |
| C3F39_RS29750 () | 96622..97020 | - | 399 | WP_023179972.1 | hypothetical protein | - |
| C3F39_RS34280 () | 97028..97417 | - | 390 | WP_004153076.1 | hypothetical protein | - |
| C3F39_RS29760 () | 97460..97864 | - | 405 | WP_004152503.1 | hypothetical protein | - |
| C3F39_RS29765 () | 97931..98242 | - | 312 | WP_004152502.1 | hypothetical protein | - |
| C3F39_RS29770 () | 98243..98461 | - | 219 | WP_004152501.1 | hypothetical protein | - |
| C3F39_RS29775 () | 98567..98977 | - | 411 | WP_004152499.1 | hypothetical protein | - |
| C3F39_RS29780 () | 99109..99693 | - | 585 | WP_004161368.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C3F39_RS29785 () | 99807..101231 | - | 1425 | WP_004155033.1 | conjugal transfer protein TraB | - |
| C3F39_RS29790 () | 101231..101971 | - | 741 | WP_004152497.1 | type-F conjugative transfer system secretin TraK | - |
| C3F39_RS29795 () | 101958..102524 | - | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| C3F39_RS29800 () | 102544..102849 | - | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| C3F39_RS29805 () | 102863..103231 | - | 369 | WP_004152496.1 | type IV conjugative transfer system pilin TraA | - |
| C3F39_RS29810 () | 103285..103671 | - | 387 | WP_004152495.1 | TraY domain-containing protein | - |
| C3F39_RS29815 () | 103750..104436 | - | 687 | WP_004152494.1 | transcriptional regulator TraJ family protein | - |
| C3F39_RS29820 () | 104610..105008 | - | 399 | WP_004152493.1 | relaxosome protein TraM | - |
| C3F39_RS29825 () | 105430..105915 | + | 486 | WP_001568108.1 | hypothetical protein | VF |
| C3F39_RS29830 () | 105948..106277 | - | 330 | WP_047066474.1 | hypothetical protein | - |
| C3F39_RS29835 () | 106310..107131 | - | 822 | WP_004152492.1 | DUF945 domain-containing protein | - |
| C3F39_RS29845 () | 107961..108374 | - | 414 | WP_023287139.1 | helix-turn-helix domain-containing protein | - |
| C3F39_RS29850 () | 108375..108653 | - | 279 | WP_004152721.1 | helix-turn-helix domain-containing protein | - |
| C3F39_RS29855 () | 108643..108962 | - | 320 | Protein_103 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C3F39_RS29860 () | 109043..109267 | - | 225 | WP_014343499.1 | hypothetical protein | - |
| C3F39_RS29865 () | 109278..109490 | - | 213 | WP_019706020.1 | hypothetical protein | - |
| C3F39_RS29870 () | 109583..110563 | + | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| C3F39_RS29875 () | 110713..110982 | - | 270 | Protein_107 | hypothetical protein | - |
| C3F39_RS29880 () | 111038..111364 | - | 327 | WP_001568059.1 | hypothetical protein | - |
| C3F39_RS29885 () | 111361..112089 | - | 729 | WP_048266274.1 | plasmid SOS inhibition protein A | - |
| C3F39_RS29890 () | 112086..112517 | - | 432 | WP_001568057.1 | conjugation system SOS inhibitor PsiB | - |
| C3F39_RS29895 () | 112562..114619 | - | 2058 | WP_104457657.1 | ParB/RepB/Spo0J family partition protein | - |
| C3F39_RS29900 () | 114689..114937 | - | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| C3F39_RS29905 () | 114986..115528 | - | 543 | WP_021314431.1 | single-stranded DNA-binding protein | - |
| C3F39_RS29915 () | 116358..116921 | - | 564 | WP_080884163.1 | methyltransferase | - |
| C3F39_RS29920 () | 116969..118324 | - | 1356 | WP_023329035.1 | DUF3560 domain-containing protein | - |
| C3F39_RS29925 () | 118376..118606 | - | 231 | WP_009310031.1 | hypothetical protein | - |
| C3F39_RS29930 () | 118698..118925 | - | 228 | WP_001568050.1 | hypothetical protein | - |
| C3F39_RS29950 () | 119605..119925 | - | 321 | WP_001568049.1 | hypothetical protein | - |
| C3F39_RS29955 () | 119960..120214 | - | 255 | WP_024191981.1 | DNA polymerase III subunit theta | - |
| C3F39_RS29960 () | 120402..120593 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| C3F39_RS29965 () | 120636..121142 | - | 507 | WP_001568046.1 | antirestriction protein ArdA | - |
| C3F39_RS34285 () | 121185..121613 | - | 429 | WP_001568045.1 | antirestriction protein | - |
| C3F39_RS29975 () | 122294..123061 | - | 768 | WP_001568044.1 | hypothetical protein | - |
| C3F39_RS29980 () | 123115..123534 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| C3F39_RS29985 () | 123544..123765 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| C3F39_RS29990 () | 123765..124466 | - | 702 | WP_001568041.1 | DNA methylase | - |
| C3F39_RS34290 () | 124538..124740 | - | 203 | Protein_127 | hypothetical protein | - |
| C3F39_RS30000 () | 124903..125133 | - | 231 | WP_040245863.1 | hypothetical protein | - |
| C3F39_RS30005 () | 125196..125867 | - | 672 | WP_096000331.1 | plasmid partitioning/stability family protein | - |
| C3F39_RS30010 () | 125870..126841 | - | 972 | WP_004152353.1 | mediator of plasmid stability | - |
| C3F39_RS30015 () | 127075..127506 | + | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C3F39_RS30020 () | 127506..128777 | + | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
| C3F39_RS30025 () | 129189..130064 | + | 876 | WP_004098982.1 | RepB family plasmid replication initiator protein | - |
| C3F39_RS30030 () | 130713..131339 | + | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| C3F39_RS34295 () | 131336..131638 | + | 303 | WP_071571079.1 | hypothetical protein | - |
| C3F39_RS30040 () | 132070..132864 | - | 795 | WP_004197635.1 | site-specific integrase | - |
| C3F39_RS30045 () | 133062..134078 | - | 1017 | WP_017899884.1 | hypothetical protein | - |
| C3F39_RS30050 () | 134089..134403 | - | 315 | WP_053389906.1 | hypothetical protein | - |
| C3F39_RS30055 () | 134430..134825 | - | 396 | WP_017899885.1 | hypothetical protein | - |
| C3F39_RS30060 () | 134994..135299 | - | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C3F39_RS30065 () | 135301..135519 | - | 219 | WP_006788213.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C3F39_RS30080 () | 136117..136698 | + | 582 | WP_101883326.1 | hypothetical protein | - |
| C3F39_RS30085 () | 136840..137886 | - | 1047 | WP_104457658.1 | IS481 family transposase ISKpn28 | Transposase |
| C3F39_RS30090 () | 137984..138916 | + | 933 | WP_101883327.1 | Abi family protein | - |
| C3F39_RS30095 () | 139161..141839 | - | 2679 | WP_101883328.1 | hypothetical protein | - |
| C3F39_RS30100 () | 142641..143348 | - | 708 | WP_101883329.1 | Enterobactin synthase component D | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|