MGE detailed information
MGE type: Prophage MGE length: 54789 bp
Accession: NZ_CP026353 Location: 1614804..1669592 Organism: Escherichia coli strain 4A Replicon: chromosome
Accession: NZ_CP026353 Location: 1614804..1669592 Organism: Escherichia coli strain 4A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2R10_RS08405 () | 1610907..1611893 | - | 987 | Protein_1528 | GGDEF domain-containing protein | - |
| C2R10_RS08410 () | 1611966..1612325 | - | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| C2R10_RS08415 () | 1612325..1613251 | - | 927 | WP_000257409.1 | glutaminase B | - |
| C2R10_RS08420 () | 1613315..1614703 | - | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| C2R10_RS08425 () | 1614804..1615685 | + | 882 | WP_000366501.1 | hypothetical protein | VF |
| C2R10_RS08430 () | 1615763..1616878 | + | 1116 | WP_000258599.1 | putative protein YneK | - |
| C2R10_RS08435 () | 1617028..1618218 | + | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| C2R10_RS08440 () | 1618243..1618908 | - | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| C2R10_RS08445 () | 1619120..1619554 | + | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| C2R10_RS08450 () | 1619574..1619957 | + | 384 | WP_000091199.1 | hypothetical protein | VF |
| C2R10_RS08455 () | 1619989..1620207 | + | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| C2R10_RS08460 () | 1620238..1621137 | - | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| C2R10_RS08465 () | 1621332..1622519 | + | 1188 | WP_001054204.1 | efflux MFS transporter YdeE | - |
| C2R10_RS08470 () | 1622646..1622741 | + | 96 | WP_000901367.1 | protein MgtS | - |
| C2R10_RS24435 () | 1622741..1622845 | + | 105 | WP_211180496.1 | protein MgtT | - |
| C2R10_RS08475 () | 1622960..1623850 | - | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| C2R10_RS08480 () | 1624105..1624497 | - | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| C2R10_RS08485 () | 1624773..1625291 | + | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| C2R10_RS08490 () | 1625335..1627380 | - | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| C2R10_RS08495 () | 1627517..1628263 | + | 747 | WP_000636571.1 | hypothetical protein | VF |
| C2R10_RS08500 () | 1628352..1629038 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C2R10_RS08505 () | 1629215..1629418 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C2R10_RS08510 () | 1629453..1630913 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| C2R10_RS08515 () | 1631002..1632369 | - | 1368 | Protein_1551 | MHS family MFS transporter | - |
| C2R10_RS24155 () | 1632890..1633003 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| C2R10_RS08520 () | 1633072..1633305 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| C2R10_RS08525 () | 1633622..1634212 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| C2R10_RS08530 () | 1634310..1634885 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| C2R10_RS08535 () | 1634885..1635847 | - | 963 | WP_001027733.1 | phage tail protein | - |
| C2R10_RS08540 () | 1635798..1636367 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| C2R10_RS08550 () | 1636756..1636989 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| C2R10_RS08555 () | 1637047..1637457 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| C2R10_RS08560 () | 1637609..1637782 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| C2R10_RS08565 () | 1637954..1638109 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| C2R10_RS24160 () | 1638188..1638253 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| C2R10_RS08570 () | 1638256..1638444 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| C2R10_RS08575 () | 1638455..1638667 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| C2R10_RS08580 () | 1639030..1639527 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| C2R10_RS08585 () | 1639524..1640057 | - | 534 | WP_001092971.1 | lysozyme | - |
| C2R10_RS08590 () | 1640054..1640365 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| C2R10_RS08595 () | 1640370..1640585 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| C2R10_RS24440 () | 1640805..1640975 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| C2R10_RS08600 () | 1641339..1641554 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| C2R10_RS08605 () | 1641855..1642067 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| C2R10_RS24165 () | 1642122..1642211 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| C2R10_RS08610 () | 1642489..1643241 | - | 753 | WP_001047135.1 | antitermination protein | - |
| C2R10_RS08615 () | 1643255..1644304 | - | 1050 | WP_001393597.1 | DUF968 domain-containing protein | - |
| C2R10_RS08620 () | 1644306..1644584 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| C2R10_RS08625 () | 1644651..1644902 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| C2R10_RS08630 () | 1645119..1645274 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C2R10_RS08635 () | 1645346..1645633 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| C2R10_RS08640 () | 1645633..1645872 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| C2R10_RS08645 () | 1645897..1646202 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| C2R10_RS08650 () | 1646405..1646737 | + | 333 | WP_001301033.1 | protein FlxA | - |
| C2R10_RS24170 () | 1647174..1647323 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| C2R10_RS08660 () | 1647358..1647636 | - | 279 | Protein_1583 | hypothetical protein | - |
| C2R10_RS08665 () | 1647620..1647850 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| C2R10_RS08670 () | 1647934..1648341 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| C2R10_RS08675 () | 1648508..1648663 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| C2R10_RS08685 () | 1648823..1649041 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| C2R10_RS08695 () | 1649609..1649797 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| C2R10_RS08700 () | 1649794..1649985 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| C2R10_RS08705 () | 1650078..1650845 | + | 768 | Protein_1590 | exonuclease | - |
| C2R10_RS08710 () | 1650842..1651537 | + | 696 | Protein_1591 | IS3 family transposase IS2 | Transposase |
| C2R10_RS08715 () | 1651551..1652708 | + | 1158 | Protein_1592 | hypothetical protein ; Integrase | Integrase |
| C2R10_RS08725 () | 1652896..1653915 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| C2R10_RS08730 () | 1653927..1655141 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| C2R10_RS08740 () | 1655347..1655673 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| C2R10_RS08745 () | 1655808..1656149 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| C2R10_RS08750 () | 1656184..1656744 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| C2R10_RS08755 () | 1656747..1657457 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| C2R10_RS08760 () | 1657565..1657870 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| C2R10_RS08765 () | 1658069..1660495 | + | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| C2R10_RS08770 () | 1660556..1662979 | + | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| C2R10_RS08775 () | 1662990..1663607 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| C2R10_RS08780 () | 1663609..1664463 | + | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| C2R10_RS08785 () | 1664506..1665120 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| C2R10_RS08790 () | 1665279..1666571 | + | 1293 | WP_071592181.1 | voltage-gated ClC-type chloride channel ClcB | - |
| C2R10_RS08795 () | 1666524..1667219 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| C2R10_RS08800 () | 1667344..1668564 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| C2R10_RS08805 () | 1668699..1669592 | - | 894 | WP_001019525.1 | hypothetical protein | VF |
| C2R10_RS08810 () | 1669699..1670952 | + | 1254 | WP_000091840.1 | MFS transporter | - |
| C2R10_RS24445 () | 1671001..1671120 | - | 120 | WP_001299090.1 | hypothetical protein | - |
| C2R10_RS08820 () | 1671376..1671684 | + | 309 | WP_001340364.1 | acid resistance repetitive basic protein Asr | - |
| C2R10_RS08825 () | 1671777..1671860 | + | 84 | WP_000233093.1 | stationary phase-induced protein | - |
| C2R10_RS08830 () | 1671960..1672781 | + | 822 | WP_001260865.1 | serine protease | - |
| C2R10_RS08835 () | 1672820..1673149 | - | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| C2R10_RS08840 () | 1673136..1673501 | - | 366 | WP_000276149.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| C2R10_RS24450 () | 1673608..1673709 | - | 102 | WP_211180498.1 | protein YdgV | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | Prophage | TA75071 | NZ_CP020543 | 2249542..2301270 | 0.009 |