MGE detailed information
MGE type: Conjugative plasmid MGE length: 100989 bp
Accession: NZ_CP026201 Location: 1..100989 Organism: Escherichia coli strain ECONIH6 Replicon: plasmid pNDM-d2e9
Accession: NZ_CP026201 Location: 1..100989 Organism: Escherichia coli strain ECONIH6 Replicon: plasmid pNDM-d2e9
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2U45_RS25635 () | 131..1939 | + | 1809 | WP_000821821.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C2U45_RS25640 () | 1966..2223 | + | 258 | WP_000864352.1 | conjugal transfer protein TrbE | - |
| C2U45_RS25645 () | 2216..2959 | + | 744 | WP_001430248.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C2U45_RS25650 () | 2975..3322 | + | 348 | WP_001287891.1 | conjugal transfer protein TrbA | - |
| C2U45_RS25655 () | 3441..3725 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C2U45_RS25660 () | 3712..4257 | + | 546 | WP_000059821.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C2U45_RS25665 () | 4187..4549 | + | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| C2U45_RS25670 () | 4549..5922 | + | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| C2U45_RS25675 () | 5919..8744 | + | 2826 | WP_001007045.1 | conjugal transfer mating pair stabilization protein TraG | - |
| C2U45_RS25680 () | 8741..9250 | + | 510 | WP_031943494.1 | conjugal transfer entry exclusion protein TraS | - |
| C2U45_RS25685 () | 9264..9995 | + | 732 | WP_094658456.1 | complement resistance protein TraT | - |
| C2U45_RS25690 () | 10248..12455 | + | 2208 | WP_000009364.1 | type IV conjugative transfer system coupling protein TraD | - |
| C2U45_RS25695 () | 12455..17725 | + | 5271 | WP_015059123.1 | Multifunctional conjugation protein TraI | Relaxase |
| C2U45_RS25700 () | 17745..18491 | + | 747 | WP_015059122.1 | conjugal transfer pilus acetylase TraX | - |
| C2U45_RS25705 () | 18546..19106 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| C2U45_RS25715 () | 19736..20413 | + | 678 | WP_000392235.1 | hypothetical protein | - |
| C2U45_RS25720 () | 21067..21279 | + | 213 | Protein_17 | ANR family transcriptional regulator | - |
| C2U45_RS25730 () | 21523..21984 | + | 462 | WP_015059120.1 | thermonuclease family protein | - |
| C2U45_RS25735 () | 22030..22239 | + | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| C2U45_RS25740 () | 22277..22867 | + | 591 | WP_000766816.1 | DUF2726 domain-containing protein | - |
| C2U45_RS25745 () | 23107..23361 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| C2U45_RS25755 () | 23599..23673 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C2U45_RS25760 () | 23666..24523 | + | 858 | WP_000130647.1 | incFII family plasmid replication initiator RepA | - |
| C2U45_RS25775 () | 25439..26431 | + | 993 | WP_001579760.1 | hypothetical protein | - |
| C2U45_RS25780 () | 26490..27107 | - | 618 | WP_000521604.1 | hypothetical protein | - |
| C2U45_RS25785 () | 27302..28858 | - | 1557 | WP_001579759.1 | AAA family ATPase | - |
| C2U45_RS25790 () | 29123..29713 | - | 591 | WP_000194568.1 | hypothetical protein | - |
| C2U45_RS25795 () | 29880..32912 | - | 3033 | WP_050576375.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| C2U45_RS25800 () | 32903..33607 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| C2U45_RS25815 () | 33930..35462 | - | 1533 | WP_013362816.1 | IS91 family transposase ISVsa3 | Transposase |
| C2U45_RS26740 () | 35689..36030 | - | 342 | WP_023909256.1 | 60 kDa chaperonin 2 | VF |
| C2U45_RS25825 () | 35991..36440 | - | 450 | WP_013362817.1 | hypothetical protein | - |
| C2U45_RS26745 () | 36955..37125 | - | 171 | WP_170852050.1 | rRNA adenine methyltransferase | - |
| C2U45_RS25835 () | 37070..37807 | - | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
| C2U45_RS25840 () | 37933..38028 | - | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| C2U45_RS25845 () | 38163..38867 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| C2U45_RS25855 () | 38989..39903 | + | 915 | WP_089602696.1 | hypothetical protein | ARG |
| C2U45_RS25860 () | 39900..41138 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| C2U45_RS25865 () | 41138..41722 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| C2U45_RS25880 () | 42215..42979 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| C2U45_RS25895 () | 43258..43815 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| C2U45_RS25900 () | 43998..44858 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| C2U45_RS25905 () | 45028..45783 | + | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| C2U45_RS25910 () | 45864..46412 | - | 549 | WP_014342204.1 | cation:proton antiporter | - |
| C2U45_RS25915 () | 46475..46825 | + | 351 | Protein_45 | 60 kDa chaperonin | VF |
| C2U45_RS25920 () | 47019..47723 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| C2U45_RS25925 () | 47888..48181 | + | 294 | Protein_47 | IS30 family transposase ISAba125 | Transposase |
| C2U45_RS25930 () | 48282..49094 | + | 813 | WP_023408309.1 | Metallo-beta-lactamase type 2 | ARG |
| C2U45_RS25935 () | 49098..49463 | + | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| C2U45_RS25940 () | 49468..50106 | + | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| C2U45_RS25945 () | 50117..51148 | - | 1032 | WP_004201169.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| C2U45_RS25955 () | 51461..53002 | - | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| C2U45_RS25960 () | 53407..54246 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| C2U45_RS25965 () | 54240..54587 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| C2U45_RS25970 () | 54751..55542 | - | 792 | WP_001206356.1 | Streptomycin 3''-adenylyltransferase | ARG |
| C2U45_RS26550 () | 55548..55838 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| C2U45_RS25975 () | 55950..56447 | - | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| C2U45_RS25980 () | 56592..57458 | + | 867 | Protein_58 | IS91 family transposase ISAzo26 | Transposase |
| C2U45_RS25985 () | 57513..58217 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C2U45_RS25990 () | 58283..59797 | + | 1515 | Protein_60 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| C2U45_RS25995 () | 59866..60750 | + | 885 | WP_001345827.1 | hypothetical protein | - |
| C2U45_RS26000 () | 60746..60915 | + | 170 | Protein_62 | resolvase | - |
| C2U45_RS26555 () | 60922..61089 | - | 168 | WP_001430249.1 | hypothetical protein | - |
| C2U45_RS26010 () | 61261..63936 | - | 2676 | WP_015059139.1 | hypothetical protein | - |
| C2U45_RS26015 () | 64239..65240 | + | 1002 | WP_000138753.1 | DUF4238 domain-containing protein | - |
| C2U45_RS26020 () | 65465..65927 | - | 463 | Protein_66 | hypothetical protein | - |
| C2U45_RS26025 () | 66036..66386 | - | 351 | WP_001430247.1 | plasmid partitioning/stability family protein | - |
| C2U45_RS26030 () | 66389..67351 | - | 963 | WP_000959875.1 | plasmid segregation protein ParM | - |
| C2U45_RS26035 () | 67483..67791 | + | 309 | Protein_69 | hypothetical protein | - |
| C2U45_RS26045 () | 67868..68551 | + | 684 | WP_000085889.1 | DNA methylase | - |
| C2U45_RS26050 () | 68552..68773 | + | 222 | WP_001104902.1 | hypothetical protein | - |
| C2U45_RS26055 () | 68786..69220 | + | 435 | WP_000274504.1 | DUF1380 family protein | - |
| C2U45_RS26560 () | 69265..70035 | + | 771 | WP_001006207.1 | hypothetical protein | - |
| C2U45_RS26070 () | 70518..70820 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| C2U45_RS26075 () | 70867..71289 | + | 423 | WP_000271684.1 | DUF1380 family protein | - |
| C2U45_RS26080 () | 71286..71477 | + | 192 | WP_039021874.1 | hypothetical protein | - |
| C2U45_RS26085 () | 71791..73458 | - | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| C2U45_RS26750 () | 74430..74636 | + | 207 | WP_000275858.1 | hypothetical protein | - |
| C2U45_RS26105 () | 75314..77215 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| C2U45_RS26110 () | 77365..77862 | + | 498 | WP_095719660.1 | single-stranded DNA-binding protein | - |
| C2U45_RS26115 () | 77925..78158 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| C2U45_RS26120 () | 78224..80182 | + | 1959 | WP_001825193.1 | ParB/RepB/Spo0J family partition protein | - |
| C2U45_RS26125 () | 80237..80671 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| C2U45_RS26130 () | 80668..81387 | + | 720 | WP_013362833.1 | plasmid SOS inhibition protein A | - |
| C2U45_RS26565 () | 81399..81587 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 81399..81623 | + | 225 | NuclAT_0 | - | - |
| - () | 81399..81623 | + | 225 | NuclAT_0 | - | - |
| - () | 81399..81623 | + | 225 | NuclAT_0 | - | - |
| - () | 81399..81623 | + | 225 | NuclAT_0 | - | - |
| - () | 81556..81621 | + | 66 | - | - | Antitoxin Detail |
| C2U45_RS26135 () | 81667..81825 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| C2U45_RS26140 () | 82220..83887 | - | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| C2U45_RS26155 () | 85090..85377 | + | 288 | WP_000107544.1 | hypothetical protein | - |
| C2U45_RS26160 () | 85495..86316 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| C2U45_RS26165 () | 86613..87260 | - | 648 | WP_031943493.1 | hypothetical protein | VF |
| C2U45_RS26170 () | 87537..87920 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| C2U45_RS26175 () | 88111..88797 | + | 687 | WP_000332484.1 | PAS domain-containing protein | - |
| C2U45_RS26180 () | 88891..89118 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| C2U45_RS26185 () | 89152..89511 | + | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| C2U45_RS26190 () | 89526..89837 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| C2U45_RS26195 () | 89859..90425 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| C2U45_RS26200 () | 90436..91140 | + | 705 | WP_148713163.1 | type-F conjugative transfer system secretin TraK | - |
| C2U45_RS26205 () | 91140..92567 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| C2U45_RS26210 () | 92557..93147 | + | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| C2U45_RS26215 () | 93101..93454 | + | 354 | WP_071594066.1 | conjugal transfer protein TrbD | - |
| C2U45_RS26220 () | 93447..93698 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| C2U45_RS26225 () | 93695..94210 | + | 516 | WP_015059130.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C2U45_RS26230 () | 94345..94566 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| C2U45_RS26235 () | 94559..95035 | + | 477 | WP_015059129.1 | hypothetical protein | - |
| C2U45_RS26240 () | 95115..95329 | + | 215 | Protein_105 | hypothetical protein | - |
| C2U45_RS26570 () | 95357..95719 | + | 363 | WP_000836675.1 | hypothetical protein | - |
| C2U45_RS26250 () | 95845..98475 | + | 2631 | WP_000069764.1 | type IV secretion system protein TraC | - |
| C2U45_RS26255 () | 98472..98858 | + | 387 | WP_000214092.1 | type-F conjugative transfer system protein TrbI | - |
| C2U45_RS26260 () | 98855..99487 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| C2U45_RS26265 () | 99484..100476 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|