MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 165465 bp
Accession: NZ_CP026161 Location: 1..165465 Organism: Klebsiella pneumoniae strain F93-1 Replicon: plasmid pF93-1_1
Accession: NZ_CP026161 Location: 1..165465 Organism: Klebsiella pneumoniae strain F93-1 Replicon: plasmid pF93-1_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2M21_RS25840 () | 1..304 | - | 304 | Protein_0 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C2M21_RS25845 () | 276..487 | - | 212 | Protein_1 | conjugal transfer protein TraQ | - |
| C2M21_RS25850 () | 460..1245 | - | 786 | Protein_2 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C2M21_RS25855 () | 1266..1592 | - | 327 | WP_064081500.1 | hypothetical protein | - |
| C2M21_RS25865 () | 1819..2055 | - | 237 | WP_042922352.1 | conjugal transfer protein TrbE | - |
| C2M21_RS25870 () | 2087..4041 | - | 1955 | Protein_5 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C2M21_RS25875 () | 4100..4738 | - | 639 | WP_046664202.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C2M21_RS25880 () | 4751..5740 | - | 990 | WP_064081503.1 | conjugal transfer pilus assembly protein TraU | - |
| C2M21_RS25885 () | 5737..6138 | - | 402 | WP_004194979.1 | hypothetical protein | - |
| C2M21_RS25890 () | 6173..6808 | - | 636 | WP_032441885.1 | type-F conjugative transfer system protein TraW | - |
| C2M21_RS25895 () | 6808..7197 | - | 390 | WP_040107933.1 | type-F conjugative transfer system protein TrbI | - |
| C2M21_RS25900 () | 7197..9836 | - | 2640 | WP_040107932.1 | type IV secretion system protein TraC | - |
| C2M21_RS25905 () | 9908..10306 | - | 399 | WP_074188112.1 | hypothetical protein | - |
| C2M21_RS25910 () | 10314..10589 | - | 276 | WP_101529247.1 | hypothetical protein | - |
| C2M21_RS25915 () | 10670..11074 | - | 405 | WP_032104551.1 | hypothetical protein | - |
| C2M21_RS25920 () | 11141..11451 | - | 311 | Protein_15 | hypothetical protein | - |
| C2M21_RS25925 () | 11452..11670 | - | 219 | WP_004195468.1 | hypothetical protein | - |
| C2M21_RS27850 () | 11694..11984 | - | 291 | WP_064279159.1 | hypothetical protein | - |
| C2M21_RS25935 () | 12012..12191 | - | 180 | WP_077255018.1 | hypothetical protein | - |
| C2M21_RS25940 () | 12564..13148 | - | 585 | WP_064081506.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C2M21_RS25945 () | 13221..14645 | - | 1425 | WP_064081507.1 | conjugal transfer protein TraB | - |
| C2M21_RS25950 () | 14645..15385 | - | 741 | WP_064081508.1 | type-F conjugative transfer system secretin TraK | - |
| C2M21_RS25955 () | 15372..15938 | - | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| C2M21_RS25960 () | 15958..16263 | - | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| C2M21_RS25965 () | 16277..16645 | - | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| C2M21_RS25970 () | 16707..16913 | - | 207 | WP_171773970.1 | TraY domain-containing protein | - |
| C2M21_RS25975 () | 17046..17765 | - | 720 | WP_074193589.1 | conjugal transfer protein TrbJ | - |
| C2M21_RS25980 () | 17965..18381 | - | 417 | WP_074193590.1 | relaxosome protein TraM | - |
| C2M21_RS25985 () | 18772..19257 | + | 486 | WP_001568108.1 | hypothetical protein | VF |
| C2M21_RS25990 () | 19290..19619 | - | 330 | WP_074193592.1 | hypothetical protein | - |
| C2M21_RS25995 () | 19652..20473 | - | 822 | WP_064081511.1 | DUF945 domain-containing protein | - |
| C2M21_RS26005 () | 21101..21451 | - | 351 | WP_064081512.1 | hypothetical protein | - |
| C2M21_RS26010 () | 21448..21720 | - | 273 | WP_032445785.1 | hypothetical protein | - |
| C2M21_RS26020 () | 22415..22576 | - | 162 | WP_004118124.1 | type I toxin-antitoxin system Hok family toxin | - |
| C2M21_RS26025 () | 22919..23404 | - | 486 | WP_021312536.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C2M21_RS26030 () | 23392..23658 | - | 267 | WP_003026799.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C2M21_RS26035 () | 23791..24219 | - | 429 | WP_004901287.1 | GFA family protein | - |
| C2M21_RS26040 () | 24420..25788 | - | 1369 | Protein_37 | IS3 family transposase ISKpn8 | Transposase |
| C2M21_RS26050 () | 25994..26233 | - | 240 | WP_064081514.1 | hypothetical protein | - |
| C2M21_RS26060 () | 26457..27188 | - | 732 | WP_064279160.1 | plasmid SOS inhibition protein A | - |
| C2M21_RS26065 () | 27185..27616 | - | 432 | WP_004194235.1 | conjugation system SOS inhibitor PsiB | - |
| C2M21_RS26070 () | 27661..29718 | - | 2058 | WP_064081516.1 | ParB/RepB/Spo0J family partition protein | - |
| C2M21_RS26075 () | 29788..30036 | - | 249 | WP_064081517.1 | DUF905 domain-containing protein | - |
| C2M21_RS26080 () | 30085..30627 | - | 543 | WP_129059594.1 | single-stranded DNA-binding protein | - |
| C2M21_RS26085 () | 31375..31692 | - | 318 | WP_004118473.1 | hypothetical protein | - |
| C2M21_RS26090 () | 31727..31980 | - | 254 | Protein_45 | DNA polymerase III subunit theta | - |
| C2M21_RS26095 () | 32217..32642 | - | 426 | WP_064081519.1 | antirestriction protein | - |
| C2M21_RS26110 () | 33165..33395 | - | 231 | WP_004206779.1 | hypothetical protein | - |
| C2M21_RS26115 () | 33610..34035 | + | 426 | WP_001776124.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C2M21_RS26120 () | 34035..35306 | + | 1272 | WP_064279162.1 | Y-family DNA polymerase | - |
| C2M21_RS26125 () | 35385..35636 | + | 252 | WP_129059595.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| C2M21_RS26130 () | 35690..35995 | + | 306 | WP_064081532.1 | hypothetical protein | - |
| C2M21_RS26145 () | 36825..37796 | - | 972 | WP_080935400.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C2M21_RS26150 () | 37796..38962 | - | 1167 | WP_064081522.1 | Sporulation initiation inhibitor protein Soj | VF |
| C2M21_RS26170 () | 39839..40594 | - | 756 | WP_001568031.1 | replication initiation protein RepE | - |
| C2M21_RS26175 () | 41262..42545 | + | 1284 | WP_064081523.1 | DUF1173 family protein | - |
| C2M21_RS26180 () | 42694..42999 | + | 306 | WP_126034233.1 | hypothetical protein | - |
| C2M21_RS26185 () | 43321..44106 | - | 786 | WP_048291886.1 | site-specific integrase | - |
| C2M21_RS26190 () | 44305..45294 | - | 990 | WP_064081524.1 | hypothetical protein | - |
| C2M21_RS26195 () | 45481..45786 | - | 306 | WP_004197633.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C2M21_RS26200 () | 45788..46006 | - | 219 | WP_015632547.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C2M21_RS26210 () | 46215..46421 | - | 207 | Protein_61 | hypothetical protein | - |
| C2M21_RS26215 () | 46585..47673 | + | 1089 | WP_032638120.1 | hypothetical protein | - |
| C2M21_RS26220 () | 47684..49057 | + | 1374 | WP_063160997.1 | hypothetical protein | - |
| C2M21_RS26230 () | 49398..49826 | - | 429 | WP_023345594.1 | nuclear transport factor 2 family protein | - |
| C2M21_RS26235 () | 49939..50784 | - | 846 | WP_023345593.1 | SDR family oxidoreductase | - |
| C2M21_RS26240 () | 50887..51282 | + | 396 | WP_023345592.1 | helix-turn-helix transcriptional regulator | - |
| C2M21_RS26245 () | 51394..51978 | + | 585 | WP_023345591.1 | TetR/AcrR family transcriptional regulator | - |
| C2M21_RS26250 () | 52046..52888 | + | 843 | WP_064081525.1 | nitroreductase family protein | - |
| C2M21_RS26255 () | 53306..53536 | + | 231 | WP_023345588.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| C2M21_RS26260 () | 53533..53949 | + | 417 | WP_023345587.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C2M21_RS26265 () | 54041..55444 | - | 1404 | WP_129059596.1 | glycoside hydrolase family 1 protein | - |
| C2M21_RS26270 () | 55454..57328 | - | 1875 | WP_064081469.1 | beta-glucoside-specific PTS transporter subunit IIABC | - |
| C2M21_RS26275 () | 57718..58353 | - | 636 | WP_064081470.1 | DUF1349 domain-containing protein | - |
| C2M21_RS26280 () | 58392..59597 | - | 1206 | WP_077265993.1 | MFS transporter | - |
| C2M21_RS26285 () | 59682..60452 | + | 771 | WP_023345582.1 | HTH-type transcriptional regulator NimR | VF |
| C2M21_RS26290 () | 60836..62245 | + | 1410 | WP_129059597.1 | family 1 glycosylhydrolase | - |
| C2M21_RS26295 () | 62306..63202 | - | 897 | WP_023345580.1 | HTH-type transcriptional regulator DmlR | VF |
| C2M21_RS26300 () | 63302..64483 | + | 1182 | WP_064081471.1 | MFS transporter | - |
| C2M21_RS26305 () | 64602..65210 | - | 609 | WP_064081472.1 | short chain dehydrogenase | - |
| C2M21_RS26310 () | 65308..66210 | + | 903 | WP_064081473.1 | LysR family transcriptional regulator | - |
| C2M21_RS26315 () | 66352..67049 | + | 698 | Protein_81 | IS1 family transposase IS1G | Transposase |
| C2M21_RS26325 () | 67087..68126 | + | 1040 | Protein_82 | translesion error-prone DNA polymerase V subunit UmuC | - |
| C2M21_RS26330 () | 68204..68430 | + | 227 | Protein_83 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| C2M21_RS26340 () | 68901..69872 | - | 972 | WP_064279172.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C2M21_RS26345 () | 69872..71038 | - | 1167 | WP_004117793.1 | Sporulation initiation inhibitor protein Soj | VF |
| C2M21_RS26360 () | 71779..72789 | + | 1011 | WP_064081476.1 | RepB family plasmid replication initiator protein | - |
| C2M21_RS26365 () | 73426..74123 | + | 698 | Protein_87 | IS1 family transposase IS1G | Transposase |
| C2M21_RS26370 () | 74686..75459 | + | 774 | WP_064081478.1 | Histidine-binding periplasmic protein | VF |
| C2M21_RS26375 () | 75487..76197 | + | 711 | WP_064081479.1 | ABC transporter permease subunit | - |
| C2M21_RS26380 () | 76200..76883 | + | 684 | WP_064081480.1 | ABC transporter permease | - |
| C2M21_RS26385 () | 76900..77652 | + | 753 | WP_060598674.1 | Glutamine transport ATP-binding protein GlnQ | VF |
| C2M21_RS26390 () | 77682..78428 | - | 747 | WP_023345553.1 | GntR family transcriptional regulator | - |
| C2M21_RS26395 () | 78692..79750 | + | 1059 | WP_048978452.1 | phosphotransferase | - |
| C2M21_RS26400 () | 79753..81102 | + | 1350 | WP_023345551.1 | aspartate aminotransferase family protein | - |
| C2M21_RS26405 () | 81113..81991 | + | 879 | WP_064081481.1 | EamA family transporter | - |
| C2M21_RS26410 () | 82064..82635 | + | 572 | Protein_96 | IS1 family transposase IS1G | Transposase |
| C2M21_RS26415 () | 83208..83897 | + | 690 | WP_048264983.1 | EAL domain-containing protein | - |
| C2M21_RS27855 () | 83972..84154 | - | 183 | WP_126033889.1 | hypothetical protein | - |
| C2M21_RS26430 () | 84637..84882 | + | 246 | Protein_99 | hypothetical protein | VF |
| C2M21_RS26435 () | 84918..85139 | + | 222 | WP_071882702.1 | hypothetical protein | - |
| C2M21_RS26445 () | 85692..86996 | - | 1305 | WP_000703040.1 | Salicylate synthase | VF |
| C2M21_RS26450 () | 87024..88304 | - | 1281 | WP_060598851.1 | Protein AmpG | VF |
| C2M21_RS26455 () | 88297..90099 | - | 1803 | WP_060598850.1 | Putative multidrug export ATP-binding/permease protein | VF |
| C2M21_RS26460 () | 90086..91798 | - | 1713 | WP_048264980.1 | Iron import ATP-binding/permease protein IrtA | VF |
| C2M21_RS26465 () | 92055..93014 | + | 960 | WP_048264977.1 | Regulatory protein PchR | VF |
| C2M21_RS26470 () | 93205..99312 | + | 6108 | WP_048264975.1 | Anguibactin system regulator | VF |
| C2M21_RS26475 () | 99400..108891 | + | 9492 | WP_064081482.1 | Phthiocerol synthesis polyketide synthase type I PpsE | VF |
| C2M21_RS26480 () | 108888..109988 | + | 1101 | WP_000982866.1 | hypothetical protein | VF |
| C2M21_RS26485 () | 109985..110788 | + | 804 | WP_000194284.1 | Surfactin synthase thioesterase subunit | VF |
| C2M21_RS26490 () | 110792..112369 | + | 1578 | WP_048264973.1 | 2,3-dihydroxybenzoate-AMP ligase | VF |
| C2M21_RS26495 () | 112500..114521 | + | 2022 | WP_048264972.1 | Pesticin receptor | VF |
| C2M21_RS26500 () | 114666..117584 | + | 2919 | Protein_112 | Tn3 family transposase | - |
| C2M21_RS26505 () | 117631..117828 | + | 198 | Protein_113 | IS630 family transposase | - |
| C2M21_RS26510 () | 117886..118308 | - | 423 | WP_048264970.1 | Lrp/AsnC family transcriptional regulator | - |
| C2M21_RS26515 () | 118433..119446 | + | 1014 | WP_048265024.1 | ornithine cyclodeaminase | - |
| C2M21_RS26520 () | 119469..120386 | + | 918 | WP_048264969.1 | amidinotransferase | - |
| C2M21_RS26525 () | 120762..122000 | + | 1239 | WP_048291908.1 | bifunctional succinylornithine transaminase/acetylornithine transaminase | - |
| C2M21_RS26530 () | 121997..123034 | + | 1038 | WP_048264967.1 | arginine N-succinyltransferase | - |
| C2M21_RS26535 () | 123038..124534 | + | 1497 | WP_087771554.1 | succinylglutamate-semialdehyde dehydrogenase | - |
| C2M21_RS26540 () | 124534..125520 | + | 987 | WP_064279164.1 | succinylglutamate desuccinylase | - |
| C2M21_RS26545 () | 125589..126275 | + | 687 | WP_048978371.1 | histidine ABC transporter permease HisQ | - |
| C2M21_RS26550 () | 126272..126988 | + | 717 | WP_023345569.1 | ABC transporter permease | - |
| C2M21_RS26555 () | 126998..127771 | + | 774 | WP_023345570.1 | Histidine transport ATP-binding protein HisP | VF |
| C2M21_RS26560 () | 128014..128799 | + | 786 | WP_048264964.1 | ABC transporter substrate-binding protein | - |
| C2M21_RS26565 () | 128939..130024 | + | 1086 | WP_064081483.1 | alanine racemase | - |
| C2M21_RS26570 () | 130049..132117 | - | 2069 | Protein_126 | Tn3 family transposase ISEc63 | Transposase |
| C2M21_RS26575 () | 132221..133075 | + | 855 | WP_064081484.1 | McbB family protein | - |
| C2M21_RS26580 () | 133077..133883 | + | 807 | WP_064081485.1 | SagB/ThcOx family dehydrogenase | - |
| C2M21_RS26585 () | 133876..135063 | + | 1188 | WP_048268728.1 | YcaO-like family protein | - |
| C2M21_RS26590 () | 135073..135798 | + | 726 | WP_064279157.1 | hypothetical protein | - |
| C2M21_RS26595 () | 135795..136523 | + | 729 | WP_048978374.1 | ATP-binding cassette domain-containing protein | - |
| C2M21_RS26600 () | 136527..137087 | + | 561 | WP_064081487.1 | pentapeptide repeat-containing protein | - |
| C2M21_RS26605 () | 137591..137938 | + | 348 | WP_071925338.1 | phage holin family protein | - |
| C2M21_RS26620 () | 139752..140765 | - | 1014 | WP_064081488.1 | replication initiation protein | - |
| C2M21_RS26625 () | 140758..141309 | - | 552 | WP_032104583.1 | replication protein | - |
| C2M21_RS26630 () | 141302..141373 | - | 72 | WP_071786674.1 | RepA leader peptide Tap | - |
| C2M21_RS26635 () | 141586..141855 | - | 270 | WP_022631531.1 | replication regulatory protein RepA | - |
| C2M21_RS26640 () | 141991..142429 | - | 439 | Protein_138 | phospholipase D family protein | - |
| C2M21_RS26645 () | 142488..144671 | - | 2184 | WP_064279158.1 | peptidase domain-containing ABC transporter | - |
| C2M21_RS26650 () | 144671..145924 | - | 1254 | WP_064081529.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| C2M21_RS26655 () | 145927..146568 | - | 642 | WP_064081490.1 | CPBP family intramembrane metalloprotease | - |
| C2M21_RS26660 () | 146577..146774 | - | 198 | WP_032104598.1 | hypothetical protein | - |
| C2M21_RS26665 () | 146799..147173 | - | 375 | WP_071826202.1 | hypothetical protein | - |
| C2M21_RS26670 () | 147860..148207 | - | 348 | WP_064081491.1 | hypothetical protein | - |
| C2M21_RS26675 () | 148227..148823 | - | 597 | WP_064081492.1 | fertility inhibition protein FinO | - |
| C2M21_RS26680 () | 148895..149620 | - | 726 | WP_049016820.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| C2M21_RS26685 () | 149700..154961 | - | 5262 | WP_064081493.1 | Multifunctional conjugation protein TraI | Relaxase |
| C2M21_RS26690 () | 154961..157273 | - | 2313 | Protein_148 | type IV conjugative transfer system coupling protein TraD | - |
| C2M21_RS26695 () | 157503..158711 | - | 1209 | WP_071925340.1 | IS200-IS605 family transposase IS609 | Transposase |
| C2M21_RS26700 () | 158914..159645 | - | 732 | WP_064081496.1 | complement resistance protein TraT | - |
| C2M21_RS26705 () | 159896..160498 | - | 603 | WP_044264995.1 | hypothetical protein | - |
| C2M21_RS26710 () | 160521..163343 | - | 2823 | WP_064081497.1 | conjugal transfer mating pair stabilization protein TraG | - |
| C2M21_RS26715 () | 163343..164722 | - | 1380 | WP_074193588.1 | conjugal transfer protein TraH | - |
| C2M21_RS26720 () | 164700..165143 | - | 444 | WP_014343488.1 | F-type conjugal transfer protein TrbF | - |
| C2M21_RS26725 () | 165189..165465 | - | 277 | WP_042931931.1 | conjugal transfer protein TraF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|