MGE detailed information

MGE type: Conjugative plasmid        MGE length: 164510 bp
Accession: NZ_CP026131        Location: 1..164510         Organism: Klebsiella pneumoniae strain F1       Replicon: plasmid pF1_1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C2L60_RS30455 () 461..601 - 141 WP_001044210.1 hypothetical protein -
C2L60_RS28040 () 607..1317 - 711 Protein_1 IS6 family transposase -
C2L60_RS28050 () 2043..2684 + 642 WP_001011939.1 Chloramphenicol acetyltransferase 2 ARG
C2L60_RS28055 () 2816..3520 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
C2L60_RS28060 () 3989..4546 - 558 WP_042934582.1 hypothetical protein -
C2L60_RS28065 () 4674..5051 - 378 Protein_5 restriction endonuclease -
C2L60_RS28070 () 5198..6178 - 981 WP_000019445.1 IS5 family transposase ISKpn26 Transposase
C2L60_RS28075 () 6247..6639 + 393 Protein_7 3'-5' exonuclease -
C2L60_RS28080 () 6692..7087 + 396 WP_015493087.1 hypothetical protein -
C2L60_RS28085 () 7084..7695 + 612 WP_015493086.1 DUF2913 family protein -
C2L60_RS28090 () 7692..8642 - 951 WP_015493085.1 hypothetical protein VF
C2L60_RS28095 () 8789..8989 - 201 WP_040219232.1 hypothetical protein -
C2L60_RS28100 () 9043..9675 - 633 WP_022652286.1 Tn3 family transposase TnpR_TnEc1 Transposase
C2L60_RS28105 () 10038..11243 + 1206 WP_015493083.1 Plasmid partition protein A VF
C2L60_RS28110 () 11240..12211 + 972 WP_016479949.1 ParB/RepB/Spo0J family partition protein -
C2L60_RS28120 () 12347..13618 - 1272 WP_015493081.1 Y-family DNA polymerase -
C2L60_RS28125 () 13618..14040 - 423 WP_015493080.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
C2L60_RS28130 () 14220..14891 - 672 WP_015493079.1 SOS response-associated peptidase family protein -
C2L60_RS28135 () 15250..15927 + 678 WP_002211749.1 DNA methylase -
C2L60_RS28140 () 15927..16148 + 222 WP_015493077.1 hypothetical protein -
C2L60_RS28145 () 16159..16578 + 420 WP_015493076.1 DUF1380 domain-containing protein -
C2L60_RS28150 () 16632..17411 + 780 WP_015493075.1 hypothetical protein -
C2L60_RS28155 () 17816..18322 + 507 WP_015493074.1 antirestriction protein ArdA -
C2L60_RS28160 () 18365..18556 + 192 WP_015493073.1 hypothetical protein -
C2L60_RS28165 () 18749..19003 + 255 WP_015493072.1 DNA polymerase III subunit theta -
C2L60_RS28170 () 19038..19355 + 318 Protein_25 hypothetical protein -
C2L60_RS28175 () 19981..20211 + 231 WP_015493071.1 DUF905 domain-containing protein -
C2L60_RS28180 () 20282..22291 + 2010 Protein_27 ParB/RepB/Spo0J family partition protein -
C2L60_RS28185 () 22334..22765 + 432 WP_008324186.1 conjugation system SOS inhibitor PsiB -
C2L60_RS28190 () 22762..23490 + 729 WP_008324185.1 plasmid SOS inhibition protein A -
C2L60_RS30800 () 23487..23810 + 324 WP_008324183.1 hypothetical protein -
C2L60_RS28200 () 23872..24231 + 360 WP_015493069.1 hypothetical protein -
C2L60_RS28205 () 24857..25231 + 375 WP_008324180.1 hypothetical protein -
C2L60_RS28210 () 25357..26061 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
C2L60_RS28220 () 26095..26442 - 348 WP_094623447.1 type IV conjugative transfer system pilin TraA -
C2L60_RS28225 () 26504..26710 - 207 WP_171773970.1 TraY domain-containing protein -
C2L60_RS28230 () 26825..27562 - 738 WP_013214018.1 conjugal transfer protein TrbJ -
C2L60_RS28235 () 27762..28178 - 417 WP_014343494.1 relaxosome protein TraM -
C2L60_RS28240 () 28569..29054 + 486 WP_014343495.1 hypothetical protein VF
C2L60_RS28245 () 29087..29416 - 330 WP_013214015.1 hypothetical protein -
C2L60_RS28250 () 29449..30270 - 822 WP_004152492.1 DUF945 domain-containing protein -
C2L60_RS28275 () 31207..31485 - 279 WP_004152721.1 helix-turn-helix domain-containing protein -
C2L60_RS28280 () 31475..31795 - 321 WP_014343498.1 type II toxin-antitoxin system RelE/ParE family toxin -
C2L60_RS28285 () 31876..32100 - 225 WP_014343499.1 hypothetical protein -
C2L60_RS28290 () 32111..32323 - 213 WP_014343500.1 hypothetical protein -
C2L60_RS28295 () 32384..32740 - 357 WP_014343501.1 hypothetical protein -
C2L60_RS28305 () 33581..33898 - 318 WP_014343505.1 hypothetical protein -
C2L60_RS28310 () 33913..34263 - 351 WP_040245917.1 hypothetical protein -
C2L60_RS28315 () 34260..34532 - 273 WP_040245921.1 hypothetical protein -
C2L60_RS28320 () 35225..35383 - 159 WP_014343509.1 type I toxin-antitoxin system Hok family toxin -
C2L60_RS28330 () 35611..35985 - 375 WP_014343510.1 hypothetical protein -
C2L60_RS28335 () 36041..36367 - 327 WP_013023807.1 hypothetical protein -
C2L60_RS28340 () 36364..37092 - 729 WP_001568058.1 plasmid SOS inhibition protein A -
C2L60_RS28345 () 37089..37520 - 432 WP_001568057.1 conjugation system SOS inhibitor PsiB -
C2L60_RS28350 () 37565..39622 - 2058 WP_015493064.1 ParB/RepB/Spo0J family partition protein -
C2L60_RS28355 () 39692..39940 - 249 WP_001568055.1 DUF905 domain-containing protein -
C2L60_RS28360 () 39989..40531 - 543 WP_014343512.1 single-stranded DNA-binding protein -
C2L60_RS28380 () 41364..41927 - 564 WP_014343514.1 methyltransferase -
C2L60_RS28385 () 41975..43330 - 1356 WP_014343515.1 DUF3560 domain-containing protein -
C2L60_RS28390 () 43382..43612 - 231 WP_001568051.1 hypothetical protein -
C2L60_RS28395 () 43704..43931 - 228 WP_001568050.1 hypothetical protein -
C2L60_RS28415 () 44611..44931 - 321 WP_001568049.1 hypothetical protein -
C2L60_RS28420 () 44966..45220 - 255 WP_011977779.1 DNA polymerase III subunit theta -
C2L60_RS28425 () 45408..45599 - 192 WP_001568047.1 hypothetical protein -
C2L60_RS28430 () 45642..46148 - 507 WP_013214014.1 antirestriction protein ArdA -
C2L60_RS30805 () 46191..46619 - 429 WP_001568045.1 antirestriction protein -
C2L60_RS28440 () 47300..48067 - 768 WP_013214013.1 hypothetical protein -
C2L60_RS28445 () 48121..48540 - 420 WP_001568043.1 DUF1380 domain-containing protein -
C2L60_RS28450 () 48550..48771 - 222 WP_001568042.1 hypothetical protein -
C2L60_RS28455 () 48771..49472 - 702 WP_001568041.1 DNA methylase -
C2L60_RS28460 () 49909..50139 - 231 WP_001568040.1 hypothetical protein -
C2L60_RS28465 () 50202..50873 - 672 WP_013214012.1 plasmid partitioning/stability family protein -
C2L60_RS28470 () 50876..51847 - 972 WP_004152353.1 mediator of plasmid stability -
C2L60_RS28475 () 52096..53583 - 1488 WP_004178082.1 group II intron reverse transcriptase/maturase -
C2L60_RS28485 () 53990..54421 + 432 WP_001568036.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
C2L60_RS28490 () 54421..55692 + 1272 WP_013214011.1 Y-family DNA polymerase -
C2L60_RS28495 () 55774..56748 - 975 WP_011977819.1 ParB/RepB/Spo0J family partition protein -
C2L60_RS28500 () 56748..57953 - 1206 WP_011977818.1 AAA family ATPase -
C2L60_RS28515 () 59063..59929 - 867 WP_004118283.1 replication initiation protein -
C2L60_RS30540 () 60465..60578 + 114 WP_014343462.1 hypothetical protein -
C2L60_RS28520 () 60707..60964 + 258 WP_013214010.1 hypothetical protein -
C2L60_RS28525 () 61010..61789 - 780 WP_013214009.1 site-specific integrase -
C2L60_RS28530 () 61973..62977 - 1005 WP_011977814.1 hypothetical protein -
C2L60_RS28535 () 63007..63210 - 204 WP_011977813.1 hypothetical protein -
C2L60_RS28540 () 63256..63777 - 522 WP_013214008.1 hypothetical protein -
C2L60_RS28545 () 63835..64227 - 393 WP_011977811.1 hypothetical protein -
C2L60_RS28550 () 64264..65208 - 945 WP_011977810.1 hypothetical protein -
C2L60_RS28555 () 65369..65830 - 462 WP_014343465.1 hypothetical protein -
C2L60_RS28560 () 65787..66017 + 231 WP_001261282.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
C2L60_RS28565 () 66014..66430 + 417 WP_001044770.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
C2L60_RS28570 () 66504..68066 + 1563 WP_004206609.1 AAA family ATPase -
C2L60_RS28575 () 68051..69073 + 1023 WP_000361404.1 helicase UvrD -
C2L60_RS28580 () 69329..70026 + 698 Protein_92 IS1 family transposase ISKpn14 Transposase
C2L60_RS28585 () 70352..71233 + 882 WP_004199234.1 Carbapenem-hydrolyzing beta-lactamase KPC ARG
C2L60_RS28590 () 71483..72364 - 882 Protein_94 IS1182 family transposase ISKpn6 Transposase
C2L60_RS28595 () 72468..72764 - 297 WP_013213987.1 transcriptional regulator -
C2L60_RS30565 () 72810..72965 - 156 WP_013213988.1 hypothetical protein -
C2L60_RS28600 () 73093..73518 - 426 WP_013213989.1 antirestriction protein -
C2L60_RS28605 () 73629..73907 - 279 WP_013213990.1 hypothetical protein -
C2L60_RS28610 () 74441..75058 - 618 Protein_99 replication protein -
C2L60_RS28615 () 75450..76010 + 561 WP_001161490.1 Tn3 family transposase TnpR_TnAs1 Transposase
C2L60_RS28620 () 76014..78980 + 2967 WP_001138014.1 Tn3 family transposase TnpA_TnAs1 Transposase
C2L60_RS28625 () 79016..79084 - 69 Protein_102 IS6 family transposase -
C2L60_RS28630 () 79221..80081 + 861 WP_002904004.1 Beta-lactamase SHV-2 ARG
C2L60_RS28635 () 80102..80863 - 762 WP_002210513.1 DeoR/GlpR family DNA-binding transcription regulator -
C2L60_RS28645 () 81125..82027 + 903 WP_002903955.1 NAD(P)-dependent oxidoreductase -
C2L60_RS28650 () 82039..83291 + 1253 Protein_106 four-carbon acid sugar kinase family protein -
C2L60_RS28655 () 83284..83607 + 324 Protein_107 class II aldolase/adducin family protein -
C2L60_RS28660 () 83661..84365 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
C2L60_RS28665 () 84429..84704 - 276 Protein_109 PAS domain-containing protein -
C2L60_RS28670 () 84779..85483 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
C2L60_RS28680 () 85536..87623 - 2088 Protein_111 Multifunctional conjugation protein TraI Relaxase
C2L60_RS28685 () 87623..89839 - 2217 WP_059274178.1 type IV conjugative transfer system coupling protein TraD -
C2L60_RS28690 () 89890..90627 - 738 WP_015059020.1 hypothetical protein -
C2L60_RS28695 () 90830..91561 - 732 WP_021559024.1 complement resistance protein TraT -
C2L60_RS28700 () 91586..92107 - 522 WP_000632668.1 conjugal transfer entry exclusion protein TraS -
C2L60_RS28705 () 92140..94956 - 2817 WP_015059018.1 conjugal transfer mating pair stabilization protein TraG -
C2L60_RS28710 () 94953..96326 - 1374 WP_000944325.1 conjugal transfer protein TraH -
C2L60_RS28715 () 96313..96705 - 393 WP_000126338.1 F-type conjugal transfer protein TrbF -
C2L60_RS28720 () 96659..97033 - 375 WP_071776752.1 P-type conjugative transfer protein TrbJ -
C2L60_RS28725 () 96963..97508 - 546 WP_000059817.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
C2L60_RS28730 () 97495..97776 - 282 WP_000549793.1 type-F conjugative transfer system pilin chaperone TraQ -
C2L60_RS28735 () 97892..98641 - 750 WP_072354014.1 type-F conjugative transfer system pilin assembly protein TraF -
C2L60_RS28740 () 98628..98885 - 258 WP_053913405.1 conjugal transfer protein TrbE -
C2L60_RS28745 () 98912..100762 - 1851 WP_015059015.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
C2L60_RS28750 () 100759..101181 - 423 WP_001229309.1 HNH endonuclease -
C2L60_RS28755 () 101207..101578 - 372 WP_000056336.1 hypothetical protein -
C2L60_RS28760 () 101575..102213 - 639 WP_000087532.1 type-F conjugative transfer system pilin assembly protein TrbC -
C2L60_RS28765 () 102240..102761 - 522 WP_015059014.1 hypothetical protein -
C2L60_RS28770 () 102824..103132 - 309 WP_000412447.1 hypothetical protein -
C2L60_RS28775 () 103159..104151 - 993 WP_000830838.1 conjugal transfer pilus assembly protein TraU -
C2L60_RS28780 () 104148..104780 - 633 WP_001203735.1 type-F conjugative transfer system protein TraW -
C2L60_RS28785 () 104777..105163 - 387 WP_015059013.1 type-F conjugative transfer system protein TrbI -
C2L60_RS28790 () 105160..107787 - 2628 WP_015059012.1 type IV secretion system protein TraC -
C2L60_RS28795 () 107947..108168 - 222 WP_001278692.1 conjugal transfer protein TraR -
C2L60_RS28800 () 108303..108818 - 516 WP_062955122.1 type IV conjugative transfer system lipoprotein TraV -
C2L60_RS28805 () 108815..109066 - 252 WP_001038341.1 conjugal transfer protein TrbG -
C2L60_RS28810 () 109078..109308 - 231 WP_001352845.1 conjugal transfer protein TrbD -
C2L60_RS28815 () 109262..109852 - 591 WP_000002778.1 conjugal transfer protein TraP -
C2L60_RS28820 () 109842..111269 - 1428 WP_032297072.1 conjugal transfer protein TraB -
C2L60_RS28825 () 111269..111973 - 705 WP_072095570.1 type-F conjugative transfer system secretin TraK -
C2L60_RS28830 () 111984..112550 - 567 WP_000399794.1 type IV conjugative transfer system protein TraE -
C2L60_RS28835 () 112572..112883 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
C2L60_RS28840 () 112898..113263 - 366 WP_021519752.1 type IV conjugative transfer system pilin TraA -
C2L60_RS28845 () 113297..113524 - 228 WP_001254386.1 conjugal transfer relaxosome protein TraY -
C2L60_RS28850 () 113618..114304 - 687 WP_015059009.1 PAS domain-containing protein -
C2L60_RS28855 () 114495..114878 - 384 WP_000124981.1 relaxosome protein TraM -
C2L60_RS28860 () 115155..115802 + 648 WP_015059008.1 hypothetical protein VF
C2L60_RS28865 () 116099..116920 - 822 WP_001234445.1 DUF945 domain-containing protein -
C2L60_RS28870 () 117031..117327 - 297 WP_001272251.1 hypothetical protein -
C2L60_RS30810 () 117627..118004 + 378 Protein_150 hypothetical protein -
C2L60_RS30580 () 118242..118400 - 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 118444..118668 - 225 NuclAT_0 - -
- () 118444..118668 - 225 NuclAT_0 - -
- () 118444..118668 - 225 NuclAT_0 - -
- () 118444..118668 - 225 NuclAT_0 - -
C2L60_RS28895 () 118680..119399 - 720 WP_001276217.1 plasmid SOS inhibition protein A -
C2L60_RS28900 () 119396..119830 - 435 WP_000845953.1 conjugation system SOS inhibitor PsiB -
C2L60_RS28905 () 119899..121922 - 2024 Protein_154 ParB/RepB/Spo0J family partition protein -
C2L60_RS28910 () 121983..122216 - 234 WP_000006003.1 DUF905 family protein -
C2L60_RS28915 () 122274..122801 - 528 WP_000290834.1 single-stranded DNA-binding protein -
C2L60_RS28940 () 123644..124207 - 564 WP_015059007.1 class I SAM-dependent methyltransferase -
C2L60_RS28945 () 124254..125615 - 1362 WP_000170695.1 DUF3560 domain-containing protein -
C2L60_RS28950 () 125667..125897 - 231 WP_000218642.1 hypothetical protein -
C2L60_RS28960 () 127297..128964 + 1668 WP_012372796.1 group II intron reverse transcriptase/maturase -
C2L60_RS28965 () 129278..129469 - 192 WP_001027493.1 hypothetical protein -
C2L60_RS28970 () 129466..129888 - 423 WP_000271762.1 DUF1380 family protein -
C2L60_RS28975 () 129935..130360 - 426 WP_001198928.1 antirestriction protein -
C2L60_RS30815 () 130778..131554 - 777 WP_001383963.1 hypothetical protein -
C2L60_RS28990 () 131605..132039 - 435 WP_000274503.1 DUF1380 family protein -
C2L60_RS28995 () 132053..132274 - 222 WP_001104881.1 hypothetical protein -
C2L60_RS29000 () 132275..132958 - 684 WP_000085883.1 DNA methylase -
C2L60_RS29005 () 133035..133328 - 294 WP_032146011.1 hypothetical protein -
C2L60_RS29010 () 133475..134437 + 963 WP_000959884.1 plasmid segregation protein ParM -
C2L60_RS29015 () 134440..134790 + 351 WP_000361389.1 plasmid partitioning/stability family protein -
C2L60_RS29020 () 134913..135194 - 282 WP_001333089.1 hypothetical protein -
C2L60_RS29025 () 135322..135556 - 235 Protein_172 type II toxin-antitoxin system RelE/ParE family toxin -
C2L60_RS29040 () 137005..137145 - 141 WP_071557810.1 hypothetical protein -
C2L60_RS29045 () 137136..137840 + 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
C2L60_RS29050 () 137928..138209 + 282 WP_015059004.1 sodium/hydrogen exchanger -
C2L60_RS29055 () 138290..139045 - 756 WP_012372818.1 16S rRNA (guanine(1405)-N(7))-methyltransferase ARG
C2L60_RS29060 () 139215..140075 - 861 WP_000027057.1 Beta-lactamase TEM ARG
C2L60_RS29065 () 140258..140794 - 537 WP_064441864.1 Tn3 family transposase TnpR_Tn3 Transposase
C2L60_RS29070 () 140886..141074 + 189 WP_000957857.1 hypothetical protein -
C2L60_RS29075 () 141084..141701 + 618 Protein_180 IS91 family transposase ISSbo1 Transposase
C2L60_RS29080 () 141752..142456 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
C2L60_RS29090 () 142912..143502 - 591 Protein_182 IS91 family transposase ISSbo1 Transposase
C2L60_RS29095 () 143567..144271 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
C2L60_RS29105 () 144351..144800 + 450 Protein_184 PAS domain-containing protein -
C2L60_RS29110 () 144868..145965 - 1098 Protein_185 TonB-dependent receptor -
C2L60_RS29115 () 146022..146990 - 969 WP_013362812.1 IS5 family transposase IS903B Transposase
C2L60_RS29120 () 147025..147900 - 876 WP_013188475.1 Beta-lactamase Toho-1 ARG
C2L60_RS29125 () 148150..148341 - 192 Protein_188 transposase -
C2L60_RS29130 () 148411..149115 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
C2L60_RS29135 () 149181..149726 + 546 Protein_190 Tn3 family transposase TnpA_Tn3 Transposase
C2L60_RS29140 () 149762..150177 - 416 Protein_191 IS1 family transposase -
C2L60_RS29155 () 150426..150827 - 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
C2L60_RS30590 () 150760..151017 - 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
C2L60_RS29160 () 151110..151763 - 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
C2L60_RS29170 () 152702..153559 - 858 WP_032495102.1 incFII family plasmid replication initiator RepA -
C2L60_RS29175 () 153552..153626 - 75 WP_001375168.1 RepA leader peptide Tap -
C2L60_RS29185 () 153871..154119 - 249 WP_000083837.1 replication regulatory protein RepA -
C2L60_RS29190 () 154403..154552 - 150 WP_001312851.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 154597..154656 + 60 NuclAT_1 - -
- () 154597..154656 + 60 NuclAT_1 - -
- () 154597..154656 + 60 NuclAT_1 - -
- () 154597..154656 + 60 NuclAT_1 - -
C2L60_RS29200 () 154857..155087 - 231 WP_001736714.1 hypothetical protein -
C2L60_RS29205 () 155251..155850 - 600 WP_032083981.1 hypothetical protein -
C2L60_RS29210 () 156236..156436 - 201 WP_015059022.1 hypothetical protein -
C2L60_RS29215 () 156568..157128 - 561 WP_000139328.1 fertility inhibition protein FinO -
C2L60_RS29220 () 157183..157929 - 747 WP_000205770.1 conjugal transfer pilus acetylase TraX -
C2L60_RS29225 () 157949..158110 - 162 Protein_204 DNA helicase -
C2L60_RS29230 () 158174..158878 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
C2L60_RS29235 () 158931..158996 + 66 Protein_206 helix-turn-helix domain-containing protein -
C2L60_RS29240 () 158999..161965 + 2967 WP_042863651.1 Tn3 family transposase TnpA_ISPa38 Transposase
C2L60_RS29245 () 162044..163048 + 1005 WP_000427619.1 IS110 family transposase IS5075 Transposase
C2L60_RS29250 () 163230..163406 - 177 WP_000954592.1 Arm DNA-binding domain-containing protein -
C2L60_RS29255 () 163528..163752 - 225 WP_000743213.1 hypothetical protein -
C2L60_RS29260 () 163749..164486 - 738 WP_001446887.1 Tn3 family transposase TnpR_TnEc1 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance