MGE detailed information
MGE type: Prophage MGE length: 55502 bp
Accession: NZ_CP026073 Location: 20184..75685 Organism: Staphylococcus aureus strain FDAARGOS_42 Replicon: chromosome
Accession: NZ_CP026073 Location: 20184..75685 Organism: Staphylococcus aureus strain FDAARGOS_42 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RL00_RS00085 () | 15280..15414 | + | 135 | WP_001823225.1 | delta-lysin family phenol-soluble modulin | - |
| RL00_RS00090 () | 16013..16798 | - | 786 | WP_000867941.1 | carbon-nitrogen family hydrolase | - |
| RL00_RS00095 () | 17159..17785 | - | 627 | WP_000522384.1 | nitroreductase family protein | - |
| RL00_RS00100 () | 17982..19241 | + | 1260 | WP_000120305.1 | hypothetical protein | - |
| RL00_RS00105 () | 19266..20009 | - | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| RL00_RS00110 () | 20184..20468 | + | 285 | WP_000917289.1 | co-chaperone GroES | - |
| RL00_RS00115 () | 20544..22160 | + | 1617 | WP_000240642.1 | chaperonin GroEL | - |
| RL00_RS00120 () | 22255..22801 | - | 547 | Protein_23 | site-specific integrase | - |
| RL00_RS00125 () | 22862..23074 | + | 213 | WP_000128898.1 | hypothetical protein | - |
| RL00_RS00130 () | 23071..23661 | + | 591 | WP_001293059.1 | terminase small subunit | - |
| RL00_RS00135 () | 23978..24415 | + | 438 | WP_072419900.1 | hypothetical protein | - |
| RL00_RS00140 () | 24521..24964 | + | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| RL00_RS00150 () | 25818..27125 | - | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| RL00_RS00155 () | 27286..28197 | + | 912 | WP_000825510.1 | iron-hydroxamate ABC transporter substrate-binding protein | - |
| RL00_RS00160 () | 28259..29104 | + | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| RL00_RS00165 () | 29476..30699 | - | 1224 | WP_000206623.1 | ArgE/DapE family deacylase | - |
| RL00_RS00170 () | 31135..32187 | + | 1053 | WP_000791417.1 | bi-component leukocidin LukGH subunit H | - |
| RL00_RS00175 () | 32209..33225 | + | 1017 | WP_000595401.1 | bi-component leukocidin LukGH subunit G | - |
| RL00_RS00180 () | 33463..34293 | - | 831 | Protein_34 | sphingomyelin phosphodiesterase | - |
| RL00_RS00185 () | 34344..35381 | - | 1038 | WP_000857194.1 | site-specific integrase | - |
| RL00_RS00190 () | 35465..36193 | - | 729 | WP_000733771.1 | staphylococcal enterotoxin type K | - |
| RL00_RS00195 () | 36217..36945 | - | 729 | WP_001033320.1 | staphylococcal enterotoxin type Q | - |
| RL00_RS00200 () | 37141..37911 | - | 771 | WP_001208482.1 | helix-turn-helix domain-containing protein | - |
| RL00_RS00205 () | 38070..38294 | + | 225 | WP_000338186.1 | DUF739 family protein | - |
| RL00_RS00210 () | 38312..38572 | + | 261 | WP_000435341.1 | transcriptional regulator | - |
| RL00_RS00215 () | 38596..39135 | - | 540 | WP_000351243.1 | hypothetical protein | - |
| RL00_RS00220 () | 39192..39941 | + | 750 | WP_001148337.1 | phage antirepressor KilAC domain-containing protein | - |
| RL00_RS00225 () | 39957..40154 | + | 198 | WP_001148861.1 | hypothetical protein | - |
| RL00_RS00230 () | 40185..40325 | + | 141 | WP_000939496.1 | hypothetical protein | - |
| RL00_RS00235 () | 40340..40972 | - | 633 | WP_000275058.1 | hypothetical protein | - |
| RL00_RS00240 () | 41031..41351 | + | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| RL00_RS00245 () | 41348..41509 | + | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| RL00_RS00250 () | 41602..41862 | + | 261 | WP_000291488.1 | DUF1108 family protein | - |
| RL00_RS00255 () | 41871..42134 | + | 264 | WP_001205732.1 | hypothetical protein | - |
| RL00_RS00260 () | 42131..44086 | + | 1956 | WP_047211354.1 | AAA family ATPase | - |
| RL00_RS00265 () | 44088..45008 | + | 921 | WP_000138475.1 | recombinase RecT | - |
| RL00_RS00270 () | 45089..45706 | + | 618 | WP_072353921.1 | MBL fold metallo-hydrolase | - |
| RL00_RS00275 () | 45707..46177 | + | 471 | WP_000934765.1 | single-stranded DNA-binding protein | - |
| RL00_RS00280 () | 46207..47100 | + | 894 | WP_000148328.1 | DnaD domain-containing protein | - |
| RL00_RS00285 () | 47107..47325 | + | 219 | WP_000338527.1 | hypothetical protein | - |
| RL00_RS00290 () | 47334..47738 | + | 405 | WP_000401978.1 | RusA family crossover junction endodeoxyribonuclease | - |
| RL00_RS00295 () | 47751..48002 | + | 252 | Protein_57 | hypothetical protein | - |
| RL00_RS00300 () | 47987..48082 | + | 96 | Protein_58 | DUF1381 domain-containing protein | - |
| RL00_RS00305 () | 48079..48228 | + | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| RL00_RS00310 () | 48387..49037 | + | 651 | WP_001005262.1 | hypothetical protein | - |
| RL00_RS00315 () | 49037..49237 | + | 201 | WP_001570807.1 | DUF1514 family protein | - |
| RL00_RS00325 () | 49260..49730 | + | 471 | WP_000282755.1 | hypothetical protein | - |
| RL00_RS00330 () | 49845..50297 | + | 453 | WP_000406191.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| RL00_RS00335 () | 50313..50657 | + | 345 | WP_000817289.1 | HNH endonuclease | - |
| RL00_RS00340 () | 50786..51253 | + | 468 | WP_000919026.1 | phage terminase small subunit P27 family | - |
| RL00_RS00345 () | 51256..52950 | + | 1695 | WP_000133304.1 | phage terminase large subunit | - |
| RL00_RS00350 () | 52964..53164 | + | 201 | WP_000365299.1 | hypothetical protein | - |
| RL00_RS00355 () | 53170..54420 | + | 1251 | WP_000511065.1 | phage portal protein | - |
| RL00_RS00360 () | 54413..54997 | + | 585 | WP_000032525.1 | HK97 family phage prohead protease | - |
| RL00_RS00365 () | 55085..56332 | + | 1248 | WP_000849950.1 | phage major capsid protein | - |
| RL00_RS00370 () | 56368..56526 | + | 159 | WP_001252099.1 | hypothetical protein | - |
| RL00_RS00375 () | 56535..56867 | + | 333 | WP_001177483.1 | head-tail connector protein | - |
| RL00_RS00380 () | 56854..57189 | + | 336 | WP_000975314.1 | head-tail adaptor protein | - |
| RL00_RS00385 () | 57189..57566 | + | 378 | WP_000501244.1 | HK97 gp10 family phage protein | - |
| RL00_RS00390 () | 57563..57943 | + | 381 | WP_000611454.1 | hypothetical protein | - |
| RL00_RS00395 () | 57944..58897 | + | 954 | WP_000570652.1 | Ig-like domain-containing protein | - |
| RL00_RS00400 () | 58962..59408 | + | 447 | WP_000442601.1 | hypothetical protein | - |
| RL00_RS00405 () | 59468..59590 | + | 123 | WP_000570353.1 | hypothetical protein | - |
| RL00_RS00410 () | 59646..64295 | + | 4650 | WP_001133533.1 | phage tail tape measure protein | - |
| RL00_RS00415 () | 64295..65785 | + | 1491 | WP_001154317.1 | phage tail family protein | - |
| RL00_RS00420 () | 65801..69583 | + | 3783 | WP_000582131.1 | hypothetical protein | - |
| RL00_RS00425 () | 69576..69728 | + | 153 | WP_001000058.1 | hypothetical protein | - |
| RL00_RS00430 () | 69774..70061 | + | 288 | WP_001262624.1 | hypothetical protein | - |
| RL00_RS00435 () | 70117..70491 | + | 375 | WP_000340977.1 | hypothetical protein | - |
| RL00_RS00440 () | 70864..71637 | + | 774 | WP_000750412.1 | staphylococcal enterotoxin type A | - |
| RL00_RS00445 () | 71746..71922 | + | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| - () | 71910..72084 | - | 175 | - | - | Antitoxin Detail |
| RL00_RS00455 () | 72134..72388 | + | 255 | WP_000611512.1 | phage holin | - |
| RL00_RS00460 () | 72400..73155 | + | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| RL00_RS00465 () | 73346..73837 | + | 492 | WP_000920039.1 | staphylokinase | - |
| RL00_RS00485 () | 74488..74823 | + | 336 | Protein_91 | SH3 domain-containing protein | - |
| RL00_RS00490 () | 75335..75685 | + | 351 | WP_000702263.1 | complement inhibitor SCIN-A | - |
| RL00_RS00495 () | 75738..75998 | - | 261 | WP_001791826.1 | hypothetical protein | - |
| RL00_RS00505 () | 76309..76488 | - | 180 | WP_000669791.1 | hypothetical protein | - |
| RL00_RS00510 () | 76810..77060 | - | 251 | Protein_95 | sphingomyelin phosphodiesterase | - |
| RL00_RS00515 () | 77446..79191 | + | 1746 | WP_001793419.1 | extracellular adherence protein Eap/Map | - |
| RL00_RS00520 () | 79182..79496 | + | 315 | Protein_97 | MAP domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus MW2 | Prophage | TA10154 | NC_003923 | 2047408..2102909 | 0 |