MGE detailed information
MGE type: Prophage MGE length: 49532 bp
Accession: NZ_CP026071 Location: 1901552..1951083 Organism: Staphylococcus aureus strain FDAARGOS_30 Replicon: chromosome
Accession: NZ_CP026071 Location: 1901552..1951083 Organism: Staphylococcus aureus strain FDAARGOS_30 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK88_RS09920 () | 1896688..1897020 | - | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
| RK88_RS09925 () | 1897054..1898055 | - | 1002 | WP_000240069.1 | LLM class flavin-dependent oxidoreductase | - |
| RK88_RS09930 () | 1898169..1898267 | - | 99 | WP_001803958.1 | hypothetical protein | - |
| RK88_RS09935 () | 1898363..1899577 | + | 1215 | WP_000286469.1 | NADH-dependent flavin oxidoreductase | - |
| RK88_RS09940 () | 1899635..1900462 | + | 828 | WP_000136022.1 | alpha/beta hydrolase | - |
| RK88_RS09960 () | 1901552..1902307 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| RK88_RS09965 () | 1902319..1902573 | - | 255 | WP_000611512.1 | phage holin | - |
| RK88_RS09970 () | 1902625..1902732 | + | 108 | WP_031790389.1 | hypothetical protein | - |
| - () | 1902654..1902793 | + | 140 | NuclAT_1 | - | - |
| - () | 1902654..1902793 | + | 140 | NuclAT_1 | - | - |
| - () | 1902654..1902793 | + | 140 | NuclAT_1 | - | - |
| - () | 1902654..1902793 | + | 140 | NuclAT_1 | - | - |
| RK88_RS09975 () | 1902785..1902961 | - | 177 | WP_072357969.1 | putative holin-like toxin | Toxin Detail |
| RK88_RS09980 () | 1903111..1903407 | - | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| RK88_RS09985 () | 1903465..1903752 | - | 288 | WP_001040261.1 | hypothetical protein | - |
| RK88_RS09990 () | 1903799..1903951 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| RK88_RS09995 () | 1903941..1907726 | - | 3786 | WP_000582190.1 | hypothetical protein | - |
| RK88_RS10000 () | 1907742..1909232 | - | 1491 | WP_047210266.1 | phage tail family protein | - |
| RK88_RS10005 () | 1909232..1913899 | - | 4668 | WP_042904995.1 | phage tail tape measure protein | - |
| RK88_RS10010 () | 1913955..1914077 | - | 123 | WP_000571956.1 | hypothetical protein | - |
| RK88_RS10015 () | 1914137..1914583 | - | 447 | WP_042904996.1 | hypothetical protein | - |
| RK88_RS10020 () | 1914648..1915601 | - | 954 | WP_000570645.1 | Ig-like domain-containing protein | - |
| RK88_RS10025 () | 1915602..1915982 | - | 381 | WP_000608369.1 | hypothetical protein | - |
| RK88_RS10030 () | 1915979..1916356 | - | 378 | WP_000501001.1 | HK97 gp10 family phage protein | - |
| RK88_RS10035 () | 1916356..1916688 | - | 333 | WP_000671501.1 | head-tail adaptor protein | - |
| RK88_RS10040 () | 1916678..1917010 | - | 333 | WP_001177664.1 | head-tail connector protein | - |
| RK88_RS10045 () | 1917019..1917177 | - | 159 | WP_001240639.1 | hypothetical protein | - |
| RK88_RS10050 () | 1917214..1918449 | - | 1236 | WP_042904997.1 | phage major capsid protein | - |
| RK88_RS10055 () | 1918536..1919120 | - | 585 | WP_025173991.1 | HK97 family phage prohead protease | - |
| RK88_RS10060 () | 1919539..1920795 | - | 1257 | WP_000511070.1 | phage portal protein | - |
| RK88_RS10065 () | 1920798..1921001 | - | 204 | WP_001052526.1 | hypothetical protein | - |
| RK88_RS10070 () | 1921015..1922709 | - | 1695 | WP_000568449.1 | phage terminase family protein | - |
| RK88_RS10075 () | 1922709..1923179 | - | 471 | WP_000919030.1 | phage terminase small subunit P27 family | - |
| RK88_RS10080 () | 1923273..1923638 | - | 366 | WP_000026170.1 | HNH endonuclease | - |
| RK88_RS10085 () | 1923645..1924097 | - | 453 | WP_000406186.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| RK88_RS10090 () | 1924212..1924700 | - | 489 | WP_000282749.1 | hypothetical protein | - |
| RK88_RS10100 () | 1924723..1924923 | - | 201 | WP_001794311.1 | DUF1514 family protein | - |
| RK88_RS10105 () | 1924923..1925572 | - | 650 | Protein_1870 | hypothetical protein | - |
| RK88_RS10110 () | 1925731..1925880 | - | 150 | WP_031872388.1 | transcriptional regulator | - |
| RK88_RS10115 () | 1925880..1926266 | - | 387 | WP_001623479.1 | hypothetical protein | - |
| RK88_RS10120 () | 1926256..1926492 | - | 237 | WP_000608279.1 | hypothetical protein | - |
| RK88_RS10125 () | 1926489..1926698 | - | 210 | WP_001125014.1 | hypothetical protein | - |
| RK88_RS10130 () | 1926673..1926861 | - | 189 | WP_000195782.1 | DUF1381 domain-containing protein | - |
| RK88_RS10135 () | 1926878..1927051 | - | 174 | WP_001209217.1 | hypothetical protein | - |
| RK88_RS10140 () | 1927088..1927624 | - | 537 | WP_031770404.1 | dUTPase | - |
| RK88_RS10145 () | 1927617..1927865 | - | 249 | WP_042904999.1 | DUF1024 family protein | - |
| RK88_RS10150 () | 1927880..1928128 | - | 249 | WP_042905000.1 | phi PVL orf 51-like protein | - |
| RK88_RS10155 () | 1928129..1928488 | - | 360 | WP_000029380.1 | hypothetical protein | - |
| RK88_RS10160 () | 1928500..1928757 | - | 258 | WP_000772916.1 | helix-turn-helix transcriptional regulator | - |
| RK88_RS10165 () | 1928758..1928943 | - | 186 | WP_001187263.1 | DUF3113 family protein | - |
| RK88_RS10170 () | 1928948..1929352 | - | 405 | WP_000049812.1 | DUF1064 domain-containing protein | - |
| RK88_RS10175 () | 1929363..1929584 | - | 222 | WP_042905001.1 | DUF3269 family protein | - |
| RK88_RS10180 () | 1929587..1929802 | - | 216 | WP_031794786.1 | hypothetical protein | - |
| RK88_RS10185 () | 1929799..1931040 | - | 1242 | WP_031794787.1 | AAA family ATPase | - |
| RK88_RS10190 () | 1931037..1931393 | - | 357 | WP_001132247.1 | hypothetical protein | - |
| RK88_RS10195 () | 1931393..1932211 | - | 819 | WP_042905004.1 | phage replisome organizer N-terminal domain-containing protein | - |
| RK88_RS10200 () | 1932183..1932875 | - | 693 | WP_042905006.1 | phi PV83 orf 19-like protein | - |
| RK88_RS10205 () | 1932888..1933442 | - | 555 | WP_000704713.1 | single-stranded DNA-binding protein | - |
| RK88_RS10210 () | 1933472..1934251 | - | 780 | WP_000137071.1 | ATP-binding protein | - |
| RK88_RS10215 () | 1934252..1934788 | - | 537 | WP_000999048.1 | host-nuclease inhibitor Gam family protein | - |
| RK88_RS10220 () | 1934801..1935061 | - | 261 | WP_042905007.1 | DUF1108 family protein | - |
| RK88_RS10225 () | 1935042..1935371 | - | 330 | WP_000138304.1 | hypothetical protein | - |
| RK88_RS10230 () | 1935464..1935625 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| RK88_RS10235 () | 1935638..1935901 | - | 264 | WP_001124160.1 | helix-turn-helix domain-containing protein | - |
| RK88_RS10240 () | 1935926..1936141 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| RK88_RS10245 () | 1936196..1936561 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| RK88_RS10250 () | 1936530..1936775 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| RK88_RS10255 () | 1936815..1937039 | - | 225 | WP_000187184.1 | hypothetical protein | - |
| RK88_RS10260 () | 1937040..1937819 | - | 780 | WP_042905009.1 | phage antirepressor | - |
| RK88_RS10265 () | 1937976..1938284 | - | 309 | WP_001153965.1 | hypothetical protein | - |
| RK88_RS10270 () | 1938299..1938517 | - | 219 | WP_001198673.1 | helix-turn-helix domain-containing protein | - |
| RK88_RS10275 () | 1938659..1939378 | + | 720 | WP_000358220.1 | XRE family transcriptional regulator | - |
| RK88_RS10280 () | 1939577..1939759 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| RK88_RS10285 () | 1939905..1940528 | - | 624 | WP_015994736.1 | hypothetical protein | - |
| RK88_RS10290 () | 1940638..1941843 | + | 1206 | WP_000264185.1 | site-specific integrase | - |
| RK88_RS10295 () | 1941937..1943871 | - | 1935 | Protein_1908 | YSIRK domain-containing triacylglycerol lipase Lip2/Geh | - |
| RK88_RS10300 () | 1944288..1945601 | + | 1314 | WP_001077712.1 | YjiH family protein | - |
| RK88_RS10305 () | 1945727..1946395 | - | 669 | WP_000936720.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| RK88_RS10310 () | 1946535..1947335 | + | 801 | WP_000667382.1 | MurR/RpiR family transcriptional regulator | - |
| RK88_RS10315 () | 1947612..1948472 | - | 861 | WP_000291432.1 | ROK family protein | - |
| RK88_RS10320 () | 1948630..1949511 | + | 882 | WP_001030738.1 | N-acetylneuraminate lyase | - |
| RK88_RS10325 () | 1949551..1951083 | + | 1533 | WP_000665741.1 | sodium:solute symporter | - |
| RK88_RS10330 () | 1951188..1952408 | - | 1221 | WP_001022983.1 | NupC/NupG family nucleoside CNT transporter | - |
| RK88_RS10335 () | 1952419..1953342 | - | 924 | WP_000002080.1 | pseudouridine-5'-phosphate glycosidase | - |
| RK88_RS10340 () | 1953317..1954435 | - | 1119 | WP_001283968.1 | winged helix-turn-helix transcriptional regulator | - |
| RK88_RS10345 () | 1954778..1955809 | - | 1032 | WP_000364855.1 | PTS sugar transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|