MGE detailed information
MGE type: Prophage MGE length: 58844 bp
Accession: NZ_CP026066 Location: 2121977..2180820 Organism: Staphylococcus aureus strain FDAARGOS_20 Replicon: chromosome
Accession: NZ_CP026066 Location: 2121977..2180820 Organism: Staphylococcus aureus strain FDAARGOS_20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK78_RS10535 () | 2117329..2117577 | + | 249 | WP_001151997.1 | ferredoxin | - |
| RK78_RS10540 () | 2117683..2118228 | - | 546 | WP_001186908.1 | ECF transporter S component | - |
| RK78_RS10545 () | 2118507..2118671 | - | 165 | WP_001799520.1 | hypothetical protein | - |
| RK78_RS10550 () | 2118876..2119796 | - | 921 | WP_000913246.1 | DUF1672 domain-containing protein | - |
| RK78_RS10555 () | 2119871..2120023 | - | 153 | WP_172609139.1 | hypothetical protein | - |
| RK78_RS10560 () | 2120010..2120924 | - | 915 | WP_031883268.1 | DUF1672 domain-containing protein | - |
| RK78_RS10565 () | 2120982..2121887 | - | 906 | WP_000913238.1 | DUF1672 domain-containing protein | - |
| RK78_RS10570 () | 2121977..2122162 | - | 186 | WP_000470336.1 | hypothetical protein | - |
| RK78_RS10575 () | 2122411..2123394 | - | 984 | WP_024937002.1 | Leucotoxin LukDv | VF |
| RK78_RS10580 () | 2123390..2124328 | - | 939 | WP_000239544.1 | Gamma-hemolysin component C | VF |
| RK78_RS10585 () | 2124718..2126172 | - | 1455 | WP_000909204.1 | N-acetylmuramoyl-L-alanine amidase | - |
| RK78_RS10590 () | 2126183..2126485 | - | 303 | WP_000339141.1 | phage holin | - |
| RK78_RS10595 () | 2126621..2126920 | - | 300 | Protein_1998 | DUF2951 family protein | - |
| RK78_RS10600 () | 2126966..2127130 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| RK78_RS10605 () | 2127123..2127512 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| RK78_RS10610 () | 2127512..2128978 | - | 1467 | WP_000067152.1 | BppU family phage baseplate upper protein | - |
| RK78_RS10615 () | 2128978..2130888 | - | 1911 | WP_000429555.1 | hypothetical protein | - |
| RK78_RS10620 () | 2130904..2131194 | - | 291 | WP_000179860.1 | hypothetical protein | - |
| RK78_RS10625 () | 2131194..2132777 | - | 1584 | WP_000384479.1 | prophage endopeptidase tail family protein | - |
| RK78_RS10630 () | 2132786..2133610 | - | 825 | WP_001190529.1 | phage tail family protein | - |
| RK78_RS10635 () | 2133610..2139786 | - | 6177 | WP_001003439.1 | phage tail tape measure protein | - |
| RK78_RS10640 () | 2139800..2139958 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| RK78_RS10645 () | 2140009..2140350 | - | 342 | WP_000589166.1 | hypothetical protein | - |
| RK78_RS10650 () | 2140408..2140863 | - | 456 | WP_000169128.1 | Ig domain-containing protein | - |
| RK78_RS10655 () | 2140955..2141596 | - | 642 | WP_000807536.1 | tail protein | - |
| RK78_RS10660 () | 2141631..2142026 | - | 396 | WP_001023806.1 | DUF3168 domain-containing protein | - |
| RK78_RS10665 () | 2142027..2142428 | - | 402 | WP_000110023.1 | hypothetical protein | - |
| RK78_RS10670 () | 2142425..2142757 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| RK78_RS10675 () | 2142769..2143047 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| RK78_RS10680 () | 2143116..2144279 | - | 1164 | WP_025173972.1 | phage major capsid protein | - |
| RK78_RS10685 () | 2144291..2145064 | - | 774 | WP_000061866.1 | Clp protease ClpP | - |
| RK78_RS10690 () | 2145048..2146286 | - | 1239 | WP_001100669.1 | phage portal protein | - |
| RK78_RS10695 () | 2146291..2147982 | - | 1692 | WP_000153549.1 | terminase large subunit | - |
| RK78_RS10700 () | 2147972..2148277 | - | 306 | WP_000778930.1 | P27 family phage terminase small subunit | - |
| RK78_RS10705 () | 2148404..2148718 | - | 315 | WP_000196700.1 | HNH endonuclease | - |
| RK78_RS10710 () | 2148880..2149317 | - | 438 | WP_000513701.1 | transcriptional regulator | - |
| RK78_RS10715 () | 2149330..2150697 | - | 1368 | WP_001799526.1 | DEAD/DEAH box helicase | - |
| RK78_RS10720 () | 2150678..2150968 | - | 291 | WP_000665204.1 | VRR-NUC domain-containing protein | - |
| RK78_RS10725 () | 2151102..2151206 | + | 105 | WP_015978074.1 | hypothetical protein | - |
| RK78_RS14545 () | 2151309..2153756 | - | 2448 | WP_000884853.1 | virulence-associated E family protein | - |
| RK78_RS10740 () | 2153809..2154009 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| RK78_RS10745 () | 2154077..2154229 | - | 153 | WP_000595260.1 | transcriptional activator RinB | - |
| RK78_RS10750 () | 2154242..2154700 | - | 459 | WP_001129213.1 | hypothetical protein | - |
| RK78_RS10755 () | 2154693..2154845 | - | 153 | WP_000195790.1 | DUF1381 domain-containing protein | - |
| RK78_RS10760 () | 2154882..2155415 | - | 534 | WP_001066432.1 | dUTP pyrophosphatase | - |
| RK78_RS10765 () | 2155408..2155656 | - | 249 | WP_001065130.1 | DUF1024 family protein | - |
| RK78_RS10770 () | 2155670..2155918 | - | 249 | WP_014532979.1 | phi PVL orf 51-like protein | - |
| RK78_RS10775 () | 2155918..2156172 | - | 255 | WP_000022731.1 | DUF3310 domain-containing protein | - |
| RK78_RS10780 () | 2156169..2156522 | - | 354 | WP_000029383.1 | hypothetical protein | - |
| RK78_RS10785 () | 2156523..2156708 | - | 186 | WP_001187257.1 | DUF3113 family protein | - |
| RK78_RS10790 () | 2156708..2156863 | - | 156 | WP_000152770.1 | helix-turn-helix transcriptional regulator | - |
| RK78_RS10795 () | 2156875..2158827 | - | 1953 | WP_001796208.1 | DNA polymerase | - |
| RK78_RS10800 () | 2158896..2159453 | - | 558 | WP_000645042.1 | DUF2815 family protein | - |
| RK78_RS10805 () | 2159479..2160645 | - | 1167 | WP_000762532.1 | DUF2800 domain-containing protein | - |
| RK78_RS10810 () | 2160642..2161004 | - | 363 | WP_000279449.1 | hypothetical protein | - |
| RK78_RS10815 () | 2161019..2161342 | - | 324 | WP_000175000.1 | hypothetical protein | - |
| RK78_RS10820 () | 2161421..2161582 | - | 162 | WP_001285963.1 | DUF1270 family protein | - |
| RK78_RS10825 () | 2161595..2161858 | - | 264 | WP_001124190.1 | helix-turn-helix domain-containing protein | - |
| RK78_RS10830 () | 2161883..2162098 | - | 216 | WP_001036302.1 | hypothetical protein | - |
| RK78_RS10835 () | 2162153..2162518 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| RK78_RS10840 () | 2162487..2162732 | - | 246 | WP_000701494.1 | DUF2829 domain-containing protein | Toxin Detail |
| RK78_RS10845 () | 2162788..2162997 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| RK78_RS10850 () | 2162987..2163130 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| RK78_RS10855 () | 2163159..2163935 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| RK78_RS10860 () | 2163949..2164185 | - | 237 | WP_001121027.1 | helix-turn-helix domain-containing protein | - |
| RK78_RS10865 () | 2164337..2164651 | + | 315 | WP_000333630.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| RK78_RS10870 () | 2164664..2165125 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| RK78_RS10875 () | 2165143..2165727 | + | 585 | WP_000825948.1 | hypothetical protein | - |
| RK78_RS10880 () | 2165957..2166103 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| RK78_RS10885 () | 2166100..2166714 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| RK78_RS10890 () | 2166840..2168045 | + | 1206 | WP_000264747.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| RK78_RS10895 () | 2168088..2170130 | - | 2043 | WP_000723489.1 | hypothetical protein | - |
| RK78_RS10900 () | 2170117..2171049 | - | 933 | WP_001574168.1 | DUF1672 domain-containing protein | - |
| RK78_RS10905 () | 2171301..2173052 | - | 1752 | WP_000987777.1 | two-component system sensor histidine kinase SrrB | - |
| RK78_RS10910 () | 2173033..2173758 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| RK78_RS10915 () | 2173891..2174628 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| RK78_RS10920 () | 2174621..2175163 | - | 543 | WP_000368652.1 | SMC-Scp complex subunit ScpB | - |
| RK78_RS10925 () | 2175156..2175887 | - | 732 | WP_000273366.1 | segregation/condensation protein A | - |
| RK78_RS10930 () | 2175979..2176485 | + | 507 | WP_001183424.1 | DUF309 domain-containing protein | - |
| RK78_RS10935 () | 2176563..2177450 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| RK78_RS10940 () | 2177499..2177948 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| RK78_RS10945 () | 2178053..2178595 | - | 543 | WP_000365236.1 | NUDIX hydrolase | - |
| RK78_RS10950 () | 2178677..2179585 | + | 909 | WP_001171333.1 | aldo/keto reductase | - |
| RK78_RS10955 () | 2179801..2180049 | - | 249 | WP_000995806.1 | hypothetical protein | - |
| RK78_RS10960 () | 2180065..2180820 | - | 756 | WP_000678227.1 | SDR family oxidoreductase | - |
| RK78_RS10965 () | 2180962..2181777 | + | 816 | WP_000779748.1 | pyrroline-5-carboxylate reductase | - |
| RK78_RS10970 () | 2181882..2182802 | - | 921 | WP_000454059.1 | ribonuclease Z | - |
| RK78_RS10975 () | 2183115..2184599 | + | 1485 | WP_000105073.1 | glucose-6-phosphate dehydrogenase | - |
| RK78_RS10980 () | 2184829..2185695 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|