NZ_CP0260271578867..1590467

MGE detailed information

MGE type: Genomic_island        MGE length: 11601 bp
Accession: NZ_CP026027        Location: 1578867..1590467         Organism: Escherichia coli strain LIM       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C2H82_RS08250 () 1575682..1577367 - 1686 WP_000628576.1 ABC transporter ATP-binding protein/permease -
C2H82_RS24020 () 1577570..1577692 + 123 WP_120795387.1 protein YneP -
C2H82_RS08255 () 1577658..1578815 - 1158 WP_001301030.1 anaerobic sulfatase maturase -
C2H82_RS08260 () 1578867..1580549 - 1683 WP_001295684.1 sulfatase -
C2H82_RS08265 () 1580951..1581712 - 762 WP_000060495.1 acid stress response transcriptional regulator YdeO -
C2H82_RS08270 () 1581787..1581984 - 198 WP_000543384.1 two-component system connector SafA -
C2H82_RS08275 () 1582232..1584511 - 2280 WP_000726691.1 acid resistance putative oxidoreductase YdeP -
C2H82_RS08280 () 1584845..1585759 - 915 WP_000520676.1 Type 1 fimbrin D-mannose specific adhesin VF
C2H82_RS08285 () 1585818..1586321 - 504 WP_000825452.1 Protein FimG VF
C2H82_RS08290 () 1586334..1586864 - 531 WP_000876763.1 Protein FimF VF
C2H82_RS08295 () 1586878..1588104 - 1227 Protein_1510 Outer membrane usher protein FimD VF
C2H82_RS08300 () 1588359..1588567 - 209 Protein_1511 AraC family transcriptional regulator -
C2H82_RS08310 () 1588879..1590201 - 1323 WP_001125439.1 type II toxin-antitoxin system serine/threonine protein kinase toxin HipA Toxin Detail
C2H82_RS08315 () 1590201..1590467 - 267 WP_001301023.1 type II toxin-antitoxin system antitoxin HipB Antitoxin Detail

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20025 CP009789 1561271..1572871 0
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20066 HG738867 1469371..1480971 0
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1040 NC_000913 1580842..1592442 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21437 NC_007779 1582556..1594156 0
Escherichia coli HS Genomic island TA22421 NC_009800 1597665..1609265 0.003
Escherichia coli str. K-12 substr. DH10B Genomic island TA22685 NC_010473 1669461..1680091 0.002
Escherichia coli BW2952 Genomic island TA23853 NC_012759 1470925..1482525 0
Escherichia coli DH1 Genomic island TA27403 NC_017638 1563024..1574624 0
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29002 NC_020518 1287669..1299269 0
Escherichia coli BW25113 Genomic island TA48682 NZ_CP009273 1575099..1586699 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68424 NZ_CP017979 1484612..1496212 0
Escherichia coli strain DH5alpha Genomic island TA90478 NZ_CP025520 438284..449884 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285016 NZ_HG738867 1469371..1480971 0