MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 109205 bp
Accession: NZ_CP026016 Location: 1..109205 Organism: Klebsiella variicola strain 13450 Replicon: plasmid p13450-2
Accession: NZ_CP026016 Location: 1..109205 Organism: Klebsiella variicola strain 13450 Replicon: plasmid p13450-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2D62_RS28590 () | 348..1760 | - | 1413 | WP_060598838.1 | amino acid permease | - |
| C2D62_RS28595 () | 2307..3209 | - | 903 | WP_060598839.1 | LysR family transcriptional regulator | - |
| C2D62_RS28600 () | 3492..4631 | + | 1140 | WP_153242761.1 | PLP-dependent aspartate aminotransferase family protein | - |
| C2D62_RS28605 () | 4652..5581 | + | 930 | WP_158236771.1 | DMT family transporter | - |
| C2D62_RS28610 () | 5696..5997 | + | 302 | Protein_5 | DDE-type integrase/transposase/recombinase | - |
| C2D62_RS28615 () | 6299..6610 | + | 312 | WP_023292165.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| C2D62_RS28620 () | 6607..7023 | + | 417 | WP_072122726.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| C2D62_RS28625 () | 7840..8220 | + | 381 | WP_077138875.1 | hypothetical protein | - |
| C2D62_RS28630 () | 8286..8633 | + | 348 | WP_077138876.1 | hypothetical protein | - |
| C2D62_RS28635 () | 8721..8951 | + | 231 | WP_004197732.1 | hypothetical protein | - |
| C2D62_RS28640 () | 8998..9831 | + | 834 | WP_077138877.1 | type I restriction-modification system subunit M | - |
| C2D62_RS28645 () | 10456..10986 | + | 531 | WP_077138878.1 | antirestriction protein | - |
| C2D62_RS28650 () | 11024..11503 | - | 480 | WP_077138879.1 | hypothetical protein | VF |
| C2D62_RS28655 () | 11925..12323 | + | 399 | WP_060598876.1 | relaxosome protein TraM | - |
| C2D62_RS28660 () | 12496..13182 | + | 687 | WP_060598875.1 | transcriptional regulator TraJ family protein | - |
| C2D62_RS28665 () | 13261..13647 | + | 387 | WP_004152495.1 | TraY domain-containing protein | - |
| C2D62_RS28670 () | 13701..14069 | + | 369 | WP_049155512.1 | type IV conjugative transfer system pilin TraA | - |
| C2D62_RS28675 () | 14083..14388 | + | 306 | WP_004178059.1 | type IV conjugative transfer system protein TraL | - |
| C2D62_RS28680 () | 14408..14974 | + | 567 | WP_153242763.1 | type IV conjugative transfer system protein TraE | - |
| C2D62_RS28685 () | 14961..15701 | + | 741 | WP_023340945.1 | type-F conjugative transfer system secretin TraK | - |
| C2D62_RS28690 () | 15701..17125 | + | 1425 | WP_153242766.1 | conjugal transfer protein TraB | - |
| C2D62_RS28695 () | 17118..17714 | + | 597 | WP_060598872.1 | conjugal transfer protein TraP | - |
| C2D62_RS28700 () | 17737..18321 | + | 585 | WP_060598871.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C2D62_RS28705 () | 18453..18863 | + | 411 | WP_060598870.1 | hypothetical protein | - |
| C2D62_RS28710 () | 18868..19152 | + | 285 | WP_153242804.1 | hypothetical protein | - |
| C2D62_RS28715 () | 19176..19400 | + | 225 | WP_060598869.1 | hypothetical protein | - |
| C2D62_RS28720 () | 19393..19704 | + | 312 | WP_077138882.1 | hypothetical protein | - |
| C2D62_RS28725 () | 19771..20175 | + | 405 | WP_060598867.1 | hypothetical protein | - |
| C2D62_RS28730 () | 20257..20541 | + | 285 | WP_101417384.1 | hypothetical protein | - |
| C2D62_RS28735 () | 20549..20947 | + | 399 | WP_164876867.1 | hypothetical protein | - |
| C2D62_RS28740 () | 21019..23658 | + | 2640 | WP_153242768.1 | type IV secretion system protein TraC | - |
| C2D62_RS28745 () | 23658..24047 | + | 390 | WP_020803372.1 | type-F conjugative transfer system protein TrbI | - |
| C2D62_RS28750 () | 24047..24673 | + | 627 | WP_020314628.1 | type-F conjugative transfer system protein TraW | - |
| C2D62_RS28755 () | 24684..25676 | + | 993 | WP_020323530.1 | conjugal transfer pilus assembly protein TraU | - |
| C2D62_RS28760 () | 25691..26239 | + | 549 | WP_022631518.1 | hypothetical protein | - |
| C2D62_RS28765 () | 26214..26903 | - | 690 | WP_032427592.1 | hypothetical protein | - |
| C2D62_RS28770 () | 26960..27562 | + | 603 | WP_077138883.1 | hypothetical protein | - |
| C2D62_RS28775 () | 27707..28354 | + | 648 | WP_039698503.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C2D62_RS28780 () | 28413..30368 | + | 1956 | WP_153242770.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C2D62_RS28785 () | 30401..30682 | + | 282 | WP_022644736.1 | hypothetical protein | - |
| C2D62_RS28790 () | 30672..30899 | + | 228 | WP_153242772.1 | conjugal transfer protein TrbE | - |
| C2D62_RS28795 () | 30910..31236 | + | 327 | WP_012539967.1 | hypothetical protein | - |
| C2D62_RS28800 () | 31257..32009 | + | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C2D62_RS28805 () | 32020..32259 | + | 240 | WP_023340931.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C2D62_RS28810 () | 32231..32788 | + | 558 | WP_032433944.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C2D62_RS28815 () | 32834..33277 | + | 444 | WP_040172400.1 | F-type conjugal transfer protein TrbF | - |
| C2D62_RS28820 () | 33255..34634 | + | 1380 | WP_072198238.1 | conjugal transfer protein TraH | - |
| C2D62_RS28825 () | 34634..37456 | + | 2823 | WP_153242774.1 | conjugal transfer mating pair stabilization protein TraG | - |
| C2D62_RS28830 () | 37480..38082 | + | 603 | WP_048263624.1 | hypothetical protein | - |
| C2D62_RS28835 () | 38333..39064 | + | 732 | WP_016831056.1 | complement resistance protein TraT | - |
| C2D62_RS28840 () | 39424..41724 | + | 2301 | Protein_51 | type IV conjugative transfer system coupling protein TraD | - |
| C2D62_RS28845 () | 41724..46985 | + | 5262 | WP_153242776.1 | Multifunctional conjugation protein TraI | Relaxase |
| C2D62_RS28850 () | 47075..47800 | + | 726 | WP_025712712.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| C2D62_RS28855 () | 47955..48551 | + | 597 | WP_077138885.1 | fertility inhibition protein FinO | - |
| C2D62_RS28860 () | 48572..48919 | + | 348 | WP_015632524.1 | hypothetical protein | - |
| C2D62_RS28865 () | 49390..50034 | + | 645 | WP_153242778.1 | hypothetical protein | - |
| C2D62_RS28870 () | 50090..50740 | + | 651 | WP_060598856.1 | DUF2726 domain-containing protein | - |
| C2D62_RS28875 () | 50737..51045 | + | 309 | WP_070612642.1 | hypothetical protein | - |
| C2D62_RS28880 () | 51223..51702 | + | 480 | WP_072198240.1 | phospholipase D family protein | - |
| C2D62_RS28885 () | 52022..52300 | + | 279 | WP_004199332.1 | replication regulatory protein RepA | - |
| C2D62_RS28890 () | 52517..52594 | + | 78 | WP_099913970.1 | RepA leader peptide Tap | - |
| C2D62_RS28895 () | 52587..53444 | + | 858 | WP_137963443.1 | incFII family plasmid replication initiator RepA | - |
| C2D62_RS28900 () | 54537..55634 | + | 1098 | WP_015632529.1 | patatin-like phospholipase family protein | - |
| C2D62_RS28905 () | 55621..56685 | + | 1065 | WP_015632530.1 | hypothetical protein | - |
| C2D62_RS28910 () | 56682..58451 | + | 1770 | WP_015632531.1 | ThiF family adenylyltransferase | - |
| C2D62_RS28915 () | 58426..58887 | + | 462 | WP_032433950.1 | Mov34/MPN/PAD-1 family protein | - |
| C2D62_RS28920 () | 58967..59717 | - | 751 | Protein_67 | IS3 family transposase | - |
| C2D62_RS28925 () | 59806..61635 | + | 1830 | WP_015632533.1 | NACHT domain-containing protein | - |
| C2D62_RS28930 () | 62007..62369 | + | 363 | WP_015632534.1 | DUF596 domain-containing protein | - |
| C2D62_RS28935 () | 62391..63100 | - | 710 | Protein_70 | AraC family transcriptional regulator ligand-binding domain-containing protein | - |
| C2D62_RS28940 () | 63469..64341 | + | 873 | WP_015632539.1 | serine protease | - |
| C2D62_RS28945 () | 64504..65499 | - | 996 | WP_153242780.1 | IS110 family transposase IS1663 | Transposase |
| C2D62_RS28950 () | 65847..66761 | + | 915 | WP_072031594.1 | J domain-containing protein | - |
| C2D62_RS28955 () | 66930..67262 | + | 333 | Protein_74 | SOS response-associated peptidase family protein | - |
| C2D62_RS28960 () | 67498..67962 | + | 465 | WP_053390265.1 | hypothetical protein | - |
| C2D62_RS28965 () | 68415..69242 | + | 828 | WP_032437975.1 | hypothetical protein | - |
| C2D62_RS28970 () | 69367..69543 | + | 177 | Protein_77 | IS3 family transposase ISEhe4 | Transposase |
| C2D62_RS28975 () | 69689..69943 | - | 255 | WP_153242806.1 | hypothetical protein | - |
| C2D62_RS28980 () | 70060..70290 | - | 231 | WP_049118762.1 | hypothetical protein | - |
| C2D62_RS28985 () | 70304..70507 | - | 204 | WP_004213596.1 | hemolysin expression modulator Hha | - |
| C2D62_RS28990 () | 70568..71062 | - | 495 | WP_153242782.1 | DNA-binding protein | - |
| C2D62_RS28995 () | 71096..71614 | - | 519 | WP_050500341.1 | hypothetical protein | - |
| C2D62_RS29000 () | 71665..71919 | - | 255 | WP_032700773.1 | hypothetical protein | - |
| C2D62_RS29005 () | 72194..72694 | + | 501 | WP_032433924.1 | hypothetical protein | - |
| C2D62_RS29010 () | 72707..73486 | + | 780 | WP_032433925.1 | hypothetical protein | - |
| C2D62_RS29015 () | 73694..75286 | + | 1593 | WP_153242784.1 | hypothetical protein | - |
| C2D62_RS29020 () | 75320..76447 | + | 1128 | WP_153242786.1 | hypothetical protein | - |
| C2D62_RS29025 () | 76444..76734 | + | 291 | WP_032433928.1 | hypothetical protein | - |
| C2D62_RS29030 () | 76724..76927 | - | 204 | WP_060579404.1 | hypothetical protein | - |
| C2D62_RS29035 () | 77229..78257 | + | 1029 | Protein_90 | RES domain-containing protein | - |
| C2D62_RS29040 () | 78331..79496 | + | 1166 | WP_100248964.1 | IS3 family transposase ISKpn37 | Transposase |
| C2D62_RS29045 () | 80180..80530 | - | 351 | WP_015632544.1 | hypothetical protein | - |
| C2D62_RS29050 () | 81109..81294 | + | 186 | WP_032433930.1 | hypothetical protein | - |
| C2D62_RS29055 () | 81367..82386 | - | 1020 | WP_138089330.1 | hypothetical protein | - |
| C2D62_RS29060 () | 83240..83458 | + | 219 | WP_015632547.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C2D62_RS29065 () | 83460..83765 | + | 306 | WP_119312295.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C2D62_RS29070 () | 83952..84956 | + | 1005 | WP_153242788.1 | hypothetical protein | - |
| C2D62_RS29075 () | 85154..85939 | + | 786 | WP_153242790.1 | IS91 family transposase ISSod25 | Transposase |
| C2D62_RS29080 () | 86006..86164 | - | 159 | WP_153242792.1 | replication initiation protein | - |
| C2D62_RS29085 () | 86229..86405 | - | 177 | Protein_100 | IS5/IS1182 family transposase | - |
| C2D62_RS29090 () | 86813..87901 | + | 1089 | WP_137963429.1 | alpha/beta fold hydrolase | - |
| C2D62_RS29095 () | 88129..88617 | + | 489 | WP_137963430.1 | M15 family metallopeptidase | - |
| C2D62_RS29100 () | 88711..89358 | - | 648 | WP_137963431.1 | IS6 family transposase ISYps1 | Transposase |
| C2D62_RS29105 () | 89373..89597 | + | 225 | WP_153242794.1 | hypothetical protein | - |
| C2D62_RS29110 () | 89659..90156 | + | 498 | Protein_105 | IS91 family transposase ISSod25 | Transposase |
| C2D62_RS29115 () | 90666..91421 | + | 756 | WP_012539983.1 | replication initiation protein RepE | - |
| C2D62_RS29120 () | 92187..93392 | + | 1206 | WP_015632469.1 | AAA family ATPase | - |
| C2D62_RS29125 () | 93392..94366 | + | 975 | WP_163570468.1 | ParB/RepB/Spo0J family partition protein | - |
| C2D62_RS29130 () | 94448..95719 | - | 1272 | WP_153242796.1 | Y-family DNA polymerase | - |
| C2D62_RS29135 () | 95719..96150 | - | 432 | WP_020805749.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C2D62_RS29140 () | 96384..97355 | + | 972 | WP_072198233.1 | StbA family protein | - |
| C2D62_RS29145 () | 97358..98029 | + | 672 | WP_060598826.1 | plasmid partitioning/stability family protein | - |
| C2D62_RS29150 () | 98093..98323 | + | 231 | WP_048993627.1 | hypothetical protein | - |
| C2D62_RS29650 () | 98495..98687 | + | 193 | Protein_114 | hypothetical protein | - |
| C2D62_RS29155 () | 98759..99460 | + | 702 | WP_137963434.1 | DNA methylase | - |
| C2D62_RS29160 () | 99460..99681 | + | 222 | WP_100676540.1 | hypothetical protein | - |
| C2D62_RS29165 () | 99691..100110 | + | 420 | WP_060598828.1 | DUF1380 domain-containing protein | - |
| C2D62_RS29170 () | 100167..100895 | + | 729 | WP_137963458.1 | hypothetical protein | - |
| C2D62_RS29175 () | 101605..102033 | + | 429 | WP_060598830.1 | antirestriction protein | - |
| C2D62_RS29180 () | 102076..102582 | + | 507 | WP_137963435.1 | antirestriction protein ArdA | - |
| C2D62_RS29185 () | 102625..102816 | + | 192 | WP_137963436.1 | hypothetical protein | - |
| C2D62_RS29190 () | 103004..103258 | + | 255 | Protein_122 | DNA polymerase III subunit theta | - |
| C2D62_RS29195 () | 103293..103610 | + | 318 | WP_153242798.1 | hypothetical protein | - |
| C2D62_RS29200 () | 104272..104814 | + | 543 | WP_137963438.1 | single-stranded DNA-binding protein | - |
| C2D62_RS29205 () | 104863..105111 | + | 249 | WP_153242800.1 | DUF905 domain-containing protein | - |
| C2D62_RS29210 () | 105180..107180 | + | 2001 | WP_153242802.1 | ParB/RepB/Spo0J family partition protein | - |
| C2D62_RS29215 () | 107225..107656 | + | 432 | WP_100676544.1 | conjugation system SOS inhibitor PsiB | - |
| C2D62_RS29220 () | 107653..108384 | + | 732 | WP_060598836.1 | plasmid SOS inhibition protein A | - |
| C2D62_RS29225 () | 108381..108608 | + | 228 | WP_048334732.1 | hypothetical protein | - |
| C2D62_RS29230 () | 108608..108847 | + | 240 | WP_137963440.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|