MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 76160 bp
Accession: NZ_CP025981 Location: 1..76160 Organism: Escherichia marmotae strain HT073016 Replicon: plasmid pEM76
Accession: NZ_CP025981 Location: 1..76160 Organism: Escherichia marmotae strain HT073016 Replicon: plasmid pEM76
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1192_RS24605 () | 1..978 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| C1192_RS24610 () | 1251..1991 | - | 741 | WP_038355955.1 | tyrosine-type recombinase/integrase | - |
| C1192_RS24615 () | 2112..2240 | - | 129 | WP_101958063.1 | transcriptional regulator | - |
| C1192_RS24620 () | 2867..3667 | + | 801 | WP_038355954.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C1192_RS24625 () | 4220..4444 | + | 225 | WP_038355953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C1192_RS24630 () | 4441..4830 | + | 390 | WP_038355952.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| C1192_RS24640 () | 4998..6170 | + | 1173 | Protein_6 | IS3 family transposase | - |
| C1192_RS24645 () | 6348..8645 | + | 2298 | WP_052463081.1 | Outer membrane protein IcsA autotransporter | VF |
| C1192_RS24650 () | 8711..9919 | - | 1209 | WP_103194764.1 | IS256 family transposase IS1414 | Transposase |
| C1192_RS24655 () | 10197..12470 | - | 2274 | WP_158650423.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| C1192_RS24665 () | 12967..14655 | - | 1689 | WP_038355992.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| C1192_RS24675 () | 15441..16295 | + | 855 | WP_038355993.1 | Transposon Tn10 TetD protein | VF |
| C1192_RS24680 () | 16327..17741 | - | 1415 | Protein_12 | IS21 family transposase ISEc12 | Transposase |
| C1192_RS24685 () | 17948..18199 | - | 252 | WP_038355994.1 | plasmid stabilization protein | - |
| C1192_RS24695 () | 18553..18890 | - | 338 | Protein_14 | hypothetical protein | - |
| C1192_RS24705 () | 18915..19665 | - | 751 | Protein_15 | hypothetical protein | VF |
| C1192_RS24710 () | 19874..20821 | - | 948 | WP_038355997.1 | IS91 family transposase ISWz1 | Transposase |
| C1192_RS24720 () | 21324..22001 | + | 678 | WP_103194845.1 | IS66 family transposase ISCro1 | Transposase |
| C1192_RS24725 () | 22001..22348 | + | 348 | WP_069906977.1 | IS66 family transposase ISCro1 | Transposase |
| C1192_RS24730 () | 22368..23939 | + | 1572 | WP_103194837.1 | IS66 family transposase ISCro1 | Transposase |
| C1192_RS24735 () | 24797..25081 | + | 285 | WP_101958039.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C1192_RS24740 () | 25069..25554 | + | 486 | WP_038354869.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C1192_RS24745 () | 25682..26974 | - | 1293 | WP_103194846.1 | IS4 family transposase IS4 | Transposase |
| C1192_RS24750 () | 27059..27187 | + | 129 | Protein_23 | transposase | - |
| C1192_RS24755 () | 27213..28784 | - | 1572 | WP_103194767.1 | IS66 family transposase ISCro1 | Transposase |
| C1192_RS24760 () | 28804..29151 | - | 348 | WP_069906977.1 | IS66 family transposase ISCro1 | Transposase |
| C1192_RS24765 () | 29151..29828 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| C1192_RS24770 () | 29949..30632 | + | 684 | Protein_27 | IS66 family transposase ISCro1 | Transposase |
| C1192_RS24775 () | 30636..30926 | - | 291 | WP_052463013.1 | Effector protein NleF | VF |
| C1192_RS24780 () | 31197..31574 | + | 378 | Protein_29 | hypothetical protein | - |
| C1192_RS24785 () | 32034..32675 | + | 642 | WP_038354820.1 | DsbA family protein | - |
| C1192_RS24795 () | 33273..33539 | - | 267 | WP_077784535.1 | transposase | - |
| C1192_RS25395 () | 33544..33721 | + | 178 | Protein_32 | IS110 family transposase ISSso6 | Transposase |
| C1192_RS24800 () | 33719..33996 | + | 278 | Protein_33 | IS3 family transposase | - |
| C1192_RS24805 () | 34910..39772 | + | 4863 | WP_158650424.1 | Invasin | VF |
| C1192_RS25375 () | 39890..40056 | - | 167 | Protein_35 | transposase | - |
| C1192_RS24815 () | 40215..40355 | + | 141 | Protein_36 | helix-turn-helix domain-containing protein | - |
| C1192_RS24820 () | 40547..41503 | + | 957 | Protein_37 | IS481 family transposase ISErsp1 | Transposase |
| C1192_RS24825 () | 41645..42853 | - | 1209 | WP_103194764.1 | IS256 family transposase IS1414 | Transposase |
| C1192_RS24830 () | 43166..44494 | - | 1329 | WP_103194847.1 | IS4 family transposase IS4 | Transposase |
| C1192_RS24835 () | 44551..46209 | - | 1659 | WP_103194848.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| C1192_RS24850 () | 46994..47671 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| C1192_RS24855 () | 47671..48018 | + | 348 | WP_069906977.1 | IS66 family transposase ISCro1 | Transposase |
| C1192_RS24860 () | 48038..49609 | + | 1572 | WP_103194767.1 | IS66 family transposase ISCro1 | Transposase |
| C1192_RS24865 () | 49641..50144 | + | 504 | Protein_44 | IS3 family transposase ISEc16 | Transposase |
| C1192_RS24870 () | 50827..50934 | + | 108 | WP_103194850.1 | hypothetical protein | - |
| C1192_RS24875 () | 51120..52924 | - | 1805 | Protein_46 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C1192_RS24885 () | 54566..54793 | + | 228 | Protein_48 | transposase | - |
| C1192_RS24890 () | 55064..55894 | + | 831 | WP_052463095.1 | AraC family transcriptional regulator | - |
| C1192_RS24895 () | 56157..56421 | + | 265 | Protein_50 | IS630 family transposase IS630 | Transposase |
| C1192_RS24900 () | 56533..56730 | + | 198 | Protein_51 | transposase | - |
| C1192_RS24905 () | 56889..57668 | - | 780 | WP_052463094.1 | AraC family transcriptional regulator | - |
| C1192_RS25400 () | 58478..59751 | - | 1274 | Protein_53 | T3SS effector OspC family protein | - |
| C1192_RS24915 () | 60145..60924 | - | 780 | WP_038356013.1 | hypothetical protein | VF |
| C1192_RS24920 () | 61526..62212 | + | 687 | WP_077784614.1 | T3SS effector cysteine hydrolase SpvD family protein | - |
| C1192_RS24925 () | 62646..63365 | + | 720 | WP_038356011.1 | MAPK phosphothreonine lyase | VF |
| C1192_RS24930 () | 64017..65167 | + | 1151 | WP_103194781.1 | IS3 family transposase ISEc16 | Transposase |
| C1192_RS24935 () | 65187..65852 | - | 666 | Protein_58 | hypothetical protein | - |
| C1192_RS24940 () | 65898..66332 | - | 435 | WP_038355962.1 | DUF1380 family protein | - |
| C1192_RS24945 () | 66345..66566 | - | 222 | WP_038355961.1 | hypothetical protein | - |
| C1192_RS24950 () | 66567..67249 | - | 683 | Protein_61 | DNA methylase | - |
| C1192_RS25255 () | 67266..67631 | - | 366 | WP_052463082.1 | hypothetical protein | - |
| C1192_RS25405 () | 67550..68086 | - | 537 | WP_173405934.1 | DUF1281 domain-containing protein | - |
| C1192_RS24965 () | 68776..69747 | - | 972 | WP_038355960.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C1192_RS24970 () | 69747..70913 | - | 1167 | WP_038355959.1 | Sporulation initiation inhibitor protein Soj | VF |
| C1192_RS24975 () | 71501..72256 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| C1192_RS24980 () | 73043..73831 | - | 789 | WP_038355958.1 | site-specific integrase | - |
| C1192_RS24985 () | 73832..74137 | - | 306 | WP_038355957.1 | type II toxin-antitoxin system toxin CcdB | - |
| C1192_RS24990 () | 74139..74357 | - | 219 | WP_038355956.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| C1192_RS25000 () | 74753..75338 | + | 586 | Protein_70 | ISL3 family transposase ISEc38 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|