MGE detailed information
MGE type: Prophage MGE length: 61265 bp
Accession: NZ_CP025920 Location: 938..62202 Organism: Escherichia coli strain 103605 Replicon: chromosome
Accession: NZ_CP025920 Location: 938..62202 Organism: Escherichia coli strain 103605 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXW53_RS00025 () | 938..1759 | - | 822 | WP_000762892.1 | antitermination protein | - |
| CXW53_RS00030 () | 1756..2136 | - | 381 | WP_000140028.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CXW53_RS00035 () | 2178..3192 | - | 1015 | Protein_3 | DUF968 domain-containing protein | - |
| CXW53_RS00040 () | 3199..3471 | - | 273 | Protein_4 | hypothetical protein | - |
| CXW53_RS00045 () | 3638..3793 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| CXW53_RS00055 () | 4417..5226 | + | 810 | WP_000161640.1 | hypothetical protein | - |
| CXW53_RS00060 () | 5373..5795 | - | 423 | WP_001151221.1 | DUF977 family protein | - |
| CXW53_RS00065 () | 5836..6906 | - | 1071 | WP_089516821.1 | phage replisome organizer | - |
| CXW53_RS00070 () | 6978..7403 | - | 426 | WP_000693867.1 | Rha family transcriptional regulator | - |
| CXW53_RS00075 () | 7387..7629 | - | 243 | WP_000747951.1 | hypothetical protein | - |
| CXW53_RS00080 () | 8021..8359 | + | 339 | WP_001397087.1 | peptidase S24-like family protein | - |
| CXW53_RS00085 () | 8652..8807 | + | 156 | WP_071608135.1 | DUF1391 family protein | - |
| CXW53_RS00090 () | 8967..9185 | + | 219 | WP_001171952.1 | hypothetical protein | - |
| CXW53_RS00100 () | 9754..9942 | + | 189 | WP_000449172.1 | cell division inhibitor | - |
| CXW53_RS00105 () | 9939..10127 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| CXW53_RS00110 () | 10222..12693 | + | 2472 | WP_001745181.1 | exonuclease | - |
| CXW53_RS00115 () | 12758..13006 | + | 249 | WP_000113189.1 | excisionase | - |
| CXW53_RS00120 () | 12984..14114 | + | 1131 | WP_000113701.1 | hypothetical protein ; Integrase | Integrase |
| CXW53_RS00125 () | 14160..14285 | - | 126 | Protein_19 | outer membrane protein OmpW | - |
| CXW53_RS27035 () | 14589..14759 | - | 171 | WP_000251936.1 | hypothetical protein | - |
| CXW53_RS00130 () | 14874..15143 | - | 270 | WP_000937495.1 | tail fiber assembly protein | - |
| CXW53_RS00135 () | 15200..15868 | + | 669 | WP_000240999.1 | class I SAM-dependent methyltransferase | - |
| CXW53_RS00145 () | 15923..16507 | - | 585 | WP_000885580.1 | tail fiber assembly protein | - |
| CXW53_RS00150 () | 16507..19920 | - | 3414 | WP_095908819.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CXW53_RS00155 () | 19985..20584 | - | 600 | WP_001233193.1 | Outer membrane protein X | VF |
| CXW53_RS00160 () | 20652..24125 | - | 3474 | WP_000514651.1 | host specificity protein J | - |
| CXW53_RS00165 () | 24366..24998 | - | 633 | WP_122994019.1 | tail assembly protein | - |
| CXW53_RS00170 () | 24944..25687 | - | 744 | WP_000194701.1 | C40 family peptidase | - |
| CXW53_RS00175 () | 25698..26396 | - | 699 | WP_001355911.1 | phage minor tail protein L | - |
| CXW53_RS00180 () | 26396..26725 | - | 330 | WP_000847298.1 | phage tail protein | - |
| CXW53_RS00185 () | 26722..29295 | - | 2574 | WP_000082347.1 | phage tail tape measure protein | - |
| CXW53_RS00190 () | 29276..29689 | - | 414 | WP_000533402.1 | phage tail assembly protein T | - |
| CXW53_RS00195 () | 29716..30147 | - | 432 | WP_000479095.1 | phage minor tail protein G | - |
| CXW53_RS00200 () | 30161..30913 | - | 753 | WP_000235110.1 | phage tail protein | - |
| CXW53_RS00205 () | 30921..31316 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| CXW53_RS00210 () | 31313..31846 | - | 534 | WP_000974977.1 | phage tail protein | - |
| CXW53_RS00215 () | 31862..32215 | - | 354 | WP_126130056.1 | phage tail protein | - |
| CXW53_RS00220 () | 32208..32591 | - | 384 | WP_000201495.1 | hypothetical protein | - |
| CXW53_RS00225 () | 32643..33671 | - | 1029 | WP_000522591.1 | major capsid protein | - |
| CXW53_RS00230 () | 33729..34076 | - | 348 | WP_126130057.1 | head decoration protein | - |
| CXW53_RS00235 () | 34113..35618 | - | 1506 | WP_001253936.1 | S49 family peptidase | - |
| CXW53_RS00240 () | 35608..37200 | - | 1593 | WP_001355910.1 | phage portal protein | - |
| CXW53_RS00245 () | 37197..37403 | - | 207 | WP_000259002.1 | head-tail joining protein | - |
| CXW53_RS00250 () | 37387..39315 | - | 1929 | WP_023356388.1 | phage terminase large subunit family protein | - |
| CXW53_RS00255 () | 39287..39835 | - | 549 | WP_000867569.1 | terminase small subunit | - |
| CXW53_RS27040 () | 40277..40744 | - | 468 | WP_001082562.1 | lysis protein | - |
| CXW53_RS00270 () | 41043..41576 | - | 534 | WP_000992067.1 | lysozyme | - |
| CXW53_RS00275 () | 41682..41954 | + | 273 | WP_000369850.1 | hypothetical protein | - |
| CXW53_RS00280 () | 41920..42264 | - | 345 | WP_000193278.1 | YdfR family protein | - |
| CXW53_RS00285 () | 42269..42484 | - | 216 | WP_000372595.1 | class II holin family protein | - |
| CXW53_RS27045 () | 42634..42795 | - | 162 | WP_001355909.1 | hypothetical protein | - |
| CXW53_RS00290 () | 42792..42980 | - | 189 | WP_000874243.1 | DUF1737 domain-containing protein | - |
| CXW53_RS00295 () | 43241..43576 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| CXW53_RS00300 () | 43857..43988 | - | 132 | WP_000562553.1 | DUF3927 family protein | - |
| CXW53_RS00320 () | 44884..45705 | - | 822 | WP_000762892.1 | antitermination protein | - |
| CXW53_RS00325 () | 45702..46082 | - | 381 | WP_000140028.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CXW53_RS00330 () | 46083..47141 | - | 1059 | WP_001736257.1 | DUF968 domain-containing protein | - |
| CXW53_RS00335 () | 47143..47421 | - | 279 | WP_001410105.1 | hypothetical protein | - |
| CXW53_RS00340 () | 47588..47743 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - () | 47755..47813 | + | 59 | - | - | Antitoxin Detail |
| CXW53_RS00350 () | 48368..49177 | + | 810 | WP_000161640.1 | hypothetical protein | - |
| CXW53_RS00355 () | 49324..49746 | - | 423 | WP_001151221.1 | DUF977 family protein | - |
| CXW53_RS00360 () | 49787..50857 | - | 1071 | WP_089516821.1 | phage replisome organizer | - |
| CXW53_RS00365 () | 50929..51354 | - | 426 | WP_000693867.1 | Rha family transcriptional regulator | - |
| CXW53_RS00370 () | 51338..51581 | - | 244 | Protein_64 | hypothetical protein | - |
| CXW53_RS00375 () | 51973..52311 | + | 339 | WP_001397087.1 | peptidase S24-like family protein | - |
| CXW53_RS00380 () | 52604..52759 | + | 156 | WP_071608135.1 | DUF1391 family protein | - |
| CXW53_RS00385 () | 52919..53137 | + | 219 | WP_001171952.1 | hypothetical protein | - |
| CXW53_RS00395 () | 53706..53894 | + | 189 | WP_000449172.1 | cell division inhibitor | - |
| CXW53_RS00400 () | 53891..54079 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| CXW53_RS00405 () | 54175..56646 | + | 2472 | WP_001745181.1 | exonuclease | - |
| CXW53_RS00410 () | 56711..56959 | + | 249 | WP_000113189.1 | excisionase | - |
| CXW53_RS00415 () | 56937..58067 | + | 1131 | WP_000113701.1 | hypothetical protein ; Integrase | Integrase |
| CXW53_RS00420 () | 58113..58751 | - | 639 | WP_000737224.1 | outer membrane protein OmpW | - |
| CXW53_RS00425 () | 58991..59080 | + | 90 | Protein_74 | YkgJ family cysteine cluster protein | - |
| CXW53_RS00430 () | 59108..59851 | + | 744 | WP_000028540.1 | envelope biogenesis factor ElyC | - |
| CXW53_RS00435 () | 59881..60420 | + | 540 | WP_000808667.1 | septation protein A | - |
| CXW53_RS00440 () | 60525..60923 | + | 399 | WP_000108160.1 | acyl-CoA thioester hydrolase YciA | - |
| CXW53_RS00445 () | 60963..61682 | - | 720 | WP_001376357.1 | TonB system transport protein TonB | - |
| CXW53_RS00450 () | 61906..62202 | + | 297 | WP_000967595.1 | YciI family protein | - |
| CXW53_RS00455 () | 62501..63754 | + | 1254 | WP_001299682.1 | voltage-gated potassium channel protein | - |
| CXW53_RS00460 () | 63809..63982 | - | 174 | WP_001309467.1 | YciY family protein | - |
| CXW53_RS00465 () | 64125..65585 | + | 1461 | WP_000214516.1 | cardiolipin synthase | - |
| CXW53_RS00470 () | 65620..65949 | + | 330 | WP_000366959.1 | HI1450 family dsDNA-mimic protein | - |
| CXW53_RS00475 () | 66002..67006 | - | 1005 | WP_000994905.1 | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|