MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 132527 bp
Accession: NZ_CP025841 Location: 1..132527 Organism: Escherichia coli strain 214-4 Replicon: plasmid p214_4_132
Accession: NZ_CP025841 Location: 1..132527 Organism: Escherichia coli strain 214-4 Replicon: plasmid p214_4_132
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXX41_RS25575 () | 1..858 | + | 858 | WP_001401515.1 | incFII family plasmid replication initiator RepA | - |
| CXX41_RS25590 () | 1721..2122 | - | 402 | Protein_2 | IS91 family transposase | - |
| CXX41_RS25595 () | 2123..2769 | + | 647 | Protein_3 | IS630 family transposase | - |
| CXX41_RS25600 () | 3328..4458 | + | 1131 | WP_023486619.1 | ABC transporter permease | - |
| CXX41_RS25605 () | 4455..5657 | + | 1203 | WP_001595205.1 | TolC family protein | - |
| CXX41_RS25610 () | 5614..6387 | + | 774 | WP_050437394.1 | hypothetical protein | - |
| CXX41_RS25615 () | 6380..7006 | + | 627 | WP_001595210.1 | ABC transporter ATP-binding protein | - |
| CXX41_RS25620 () | 7187..8285 | + | 1099 | Protein_8 | IS3 family transposase ISEc17 | Transposase |
| CXX41_RS25625 () | 8582..9769 | - | 1188 | WP_024191434.1 | peptide antibiotic transporter SbmA | - |
| CXX41_RS26680 () | 10180..10392 | - | 213 | WP_148717951.1 | hypothetical protein | - |
| CXX41_RS25635 () | 10385..10549 | + | 165 | Protein_11 | IS91 family transposase | - |
| CXX41_RS25640 () | 10558..13605 | - | 3048 | WP_001595216.1 | Tn3 family transposase ISPsy42 | Transposase |
| CXX41_RS25645 () | 13755..14333 | + | 579 | WP_001400936.1 | Tn3 family transposase ISPsy39 | Transposase |
| CXX41_RS25650 () | 14326..14598 | + | 273 | WP_000566440.1 | hypothetical protein | - |
| CXX41_RS25655 () | 14641..15356 | + | 716 | Protein_15 | IS91 family transposase ISEc37 | Transposase |
| CXX41_RS26685 () | 15724..15897 | + | 174 | WP_001717498.1 | hypothetical protein | - |
| CXX41_RS25660 () | 16116..16340 | + | 225 | Protein_17 | IS66 family transposase ISEc43 | Transposase |
| CXX41_RS25665 () | 16495..16959 | + | 465 | WP_001595141.1 | CS6 fimbrial subunit A | VF |
| CXX41_RS25670 () | 16977..17480 | + | 504 | WP_001595140.1 | CS6 fimbrial subunit CssB | - |
| CXX41_RS25675 () | 17529..18227 | + | 699 | WP_001595139.1 | Chaperone protein caf1M | VF |
| CXX41_RS25680 () | 18184..20619 | + | 2436 | WP_157757767.1 | CS6 fimbrial usher CssD | - |
| CXX41_RS25685 () | 20633..21195 | - | 563 | Protein_22 | IS1 family transposase | - |
| CXX41_RS25690 () | 21384..21727 | - | 344 | Protein_23 | transposase | - |
| CXX41_RS25695 () | 21759..23372 | - | 1614 | WP_099590321.1 | IS66 family transposase ISEc23 | Transposase |
| CXX41_RS25700 () | 23403..23753 | - | 351 | WP_000624720.1 | IS66 family transposase ISEc23 | Transposase |
| CXX41_RS25705 () | 23750..24175 | - | 426 | WP_000436083.1 | IS66 family transposase IS682 | Transposase |
| CXX41_RS25710 () | 24252..25103 | - | 852 | Protein_27 | IS91 family transposase ISEc37 | Transposase |
| CXX41_RS25715 () | 25103..25468 | - | 366 | WP_001353648.1 | hypothetical protein | - |
| CXX41_RS25725 () | 25613..28582 | - | 2970 | WP_001595152.1 | Tn3 family transposase TnpA_TnShfr1 | Transposase |
| CXX41_RS25730 () | 28585..29145 | - | 561 | WP_001595151.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| CXX41_RS25735 () | 29425..29547 | - | 123 | Protein_31 | IS1 family transposase | - |
| CXX41_RS25745 () | 29817..30486 | + | 670 | Protein_32 | AAA family ATPase | - |
| CXX41_RS25750 () | 30540..31169 | + | 630 | WP_129547472.1 | hypothetical protein | - |
| CXX41_RS25755 () | 31299..32880 | + | 1582 | Protein_34 | DUF4158 domain-containing protein | - |
| CXX41_RS25760 () | 32876..33112 | + | 237 | Protein_35 | IS91 family transposase | - |
| CXX41_RS25765 () | 33480..34277 | - | 798 | WP_001595134.1 | CFA/I fimbrial subunit D | VF |
| CXX41_RS25770 () | 34474..34671 | + | 198 | WP_001413878.1 | ANR family transcriptional regulator | - |
| CXX41_RS25775 () | 34989..35156 | - | 168 | Protein_38 | IS91 family transposase | - |
| CXX41_RS25780 () | 35188..35463 | - | 276 | Protein_39 | incFII family plasmid replication initiator RepA | - |
| CXX41_RS25785 () | 35508..35948 | - | 441 | Protein_40 | IS3 family transposase ISSfl10 | Transposase |
| CXX41_RS25790 () | 36033..36422 | + | 390 | WP_164997363.1 | IS66 family transposase ISEc8 | Transposase |
| CXX41_RS25795 () | 36419..36766 | + | 348 | WP_001595131.1 | IS66 family transposase ISEc8 | Transposase |
| CXX41_RS25800 () | 36816..37226 | + | 411 | Protein_43 | IS66 family transposase ISEc8 | Transposase |
| CXX41_RS25805 () | 37220..38185 | - | 966 | Protein_44 | ISL3 family transposase ISEc38 | Transposase |
| CXX41_RS25810 () | 38486..38908 | + | 423 | WP_001595126.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CXX41_RS25815 () | 38908..40182 | + | 1275 | WP_001595125.1 | Y-family DNA polymerase | - |
| CXX41_RS26850 () | 40221..40544 | - | 324 | WP_207212908.1 | hypothetical protein | - |
| CXX41_RS25825 () | 40541..40954 | - | 414 | WP_032159708.1 | hypothetical protein | - |
| CXX41_RS25830 () | 40978..42009 | - | 1032 | WP_001595123.1 | ParB/RepB/Spo0J family partition protein | - |
| CXX41_RS25835 () | 42009..42875 | - | 867 | WP_001595122.1 | AAA family ATPase | - |
| CXX41_RS25845 () | 43429..43680 | + | 252 | WP_001595120.1 | hypothetical protein | Antitoxin Detail |
| CXX41_RS25850 () | 43677..44003 | + | 327 | WP_001595119.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CXX41_RS25855 () | 44038..44403 | + | 366 | WP_129547473.1 | transposase | - |
| CXX41_RS25860 () | 44403..45580 | + | 1178 | Protein_54 | IS91 family transposase ISEc37 | Transposase |
| CXX41_RS25875 () | 46453..47430 | + | 978 | WP_023486339.1 | RepB family plasmid replication initiator protein | - |
| CXX41_RS25880 () | 47788..49309 | - | 1522 | Protein_56 | IS3 family transposase | - |
| CXX41_RS25885 () | 49399..50139 | - | 741 | Protein_57 | site-specific integrase | - |
| CXX41_RS25895 () | 50260..50388 | - | 129 | Protein_58 | transcriptional regulator | - |
| CXX41_RS25900 () | 50877..51176 | + | 300 | WP_129547474.1 | Major pilu subunit operon regulatory protein PapB | VF |
| CXX41_RS25905 () | 51451..52293 | + | 843 | WP_001595107.1 | helix-turn-helix domain-containing protein | - |
| CXX41_RS25910 () | 52301..52744 | + | 444 | WP_001595106.1 | hypothetical protein | VF |
| CXX41_RS25915 () | 53048..53755 | + | 708 | WP_001595105.1 | Toxin coregulated pilin | VF |
| CXX41_RS25920 () | 53816..55381 | + | 1566 | WP_001595104.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| CXX41_RS25925 () | 55400..55819 | + | 420 | WP_001595103.1 | hypothetical protein | VF |
| CXX41_RS25930 () | 55836..57293 | + | 1458 | WP_001595102.1 | hypothetical protein | - |
| CXX41_RS25935 () | 57296..57856 | + | 561 | WP_001595100.1 | hypothetical protein | - |
| CXX41_RS25940 () | 57858..58685 | + | 828 | WP_001595099.1 | hypothetical protein | - |
| CXX41_RS25945 () | 58673..59161 | + | 489 | WP_001595098.1 | hypothetical protein | - |
| CXX41_RS25950 () | 59359..60690 | + | 1332 | WP_024171392.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CXX41_RS25955 () | 60677..61702 | + | 1026 | WP_001595096.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CXX41_RS25960 () | 61717..62781 | + | 1065 | WP_001595094.1 | hypothetical protein | - |
| CXX41_RS25965 () | 62787..63611 | + | 825 | WP_001595093.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| CXX41_RS25970 () | 63970..64191 | - | 222 | Protein_73 | IS91 family transposase | - |
| CXX41_RS25975 () | 64185..64550 | - | 366 | Protein_74 | transposase | - |
| CXX41_RS25980 () | 64771..65379 | - | 609 | WP_024191425.1 | hypothetical protein | - |
| CXX41_RS25990 () | 66065..66277 | - | 213 | WP_001717486.1 | hypothetical protein | - |
| CXX41_RS25995 () | 66394..66570 | + | 177 | Protein_77 | IS21 family transposase IS21 | Transposase |
| CXX41_RS26000 () | 66631..66948 | + | 318 | Protein_78 | ISL3 family transposase ISEc38 | Transposase |
| CXX41_RS26005 () | 67656..68461 | + | 806 | Protein_79 | apolipoprotein acyltransferase | - |
| CXX41_RS26010 () | 68611..70132 | + | 1522 | Protein_80 | IS3 family transposase | - |
| CXX41_RS26015 () | 70164..71315 | - | 1152 | WP_001702847.1 | IS30 family transposase IS30D | Transposase |
| CXX41_RS26025 () | 71469..71834 | + | 366 | Protein_82 | IS1 family transposase IS1N | Transposase |
| CXX41_RS26040 () | 72313..72414 | - | 102 | Protein_83 | transposase | - |
| CXX41_RS26045 () | 72897..73172 | + | 276 | WP_001595082.1 | Major pilu subunit operon regulatory protein PapB | VF |
| CXX41_RS26050 () | 73265..73783 | + | 519 | WP_001595081.1 | hypothetical protein | VF |
| CXX41_RS26055 () | 73793..76192 | + | 2400 | WP_023486680.1 | Outer membrane usher protein YraJ | VF |
| CXX41_RS26060 () | 76236..76919 | + | 684 | WP_050437387.1 | Chaperone protein FaeE | VF |
| CXX41_RS26065 () | 76961..77464 | + | 504 | WP_001595078.1 | hypothetical protein | VF |
| CXX41_RS26070 () | 77609..78376 | + | 768 | WP_024171421.1 | hypothetical protein | VF |
| CXX41_RS26075 () | 78393..79157 | + | 765 | WP_001595075.1 | hypothetical protein | VF |
| CXX41_RS26080 () | 79168..79911 | + | 744 | WP_001595074.1 | hypothetical protein | - |
| CXX41_RS26085 () | 80049..80348 | + | 300 | WP_071600068.1 | Major pilu subunit operon regulatory protein PapB | VF |
| CXX41_RS26090 () | 80497..81327 | + | 831 | WP_001595073.1 | K88 fimbrial protein AC | VF |
| CXX41_RS26095 () | 81347..82219 | + | 873 | WP_001595072.1 | K88 fimbrial protein AB | VF |
| CXX41_RS26100 () | 82511..82954 | - | 444 | Protein_95 | IS1 family transposase IS1N | Transposase |
| CXX41_RS26105 () | 83000..83284 | - | 285 | Protein_96 | IS3 family transposase ISEcB1 | Transposase |
| CXX41_RS26110 () | 83495..84657 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| CXX41_RS26115 () | 84654..84893 | - | 240 | Protein_98 | hypothetical protein | - |
| CXX41_RS26120 () | 84895..85308 | - | 414 | WP_001595064.1 | hypothetical protein | - |
| CXX41_RS26125 () | 85785..86042 | + | 258 | WP_001595062.1 | hypothetical protein | - |
| CXX41_RS26130 () | 86232..86585 | + | 354 | WP_001595061.1 | hypothetical protein | - |
| CXX41_RS26135 () | 86827..87669 | + | 843 | WP_160371899.1 | polysaccharide deacetylase family protein | - |
| CXX41_RS26140 () | 87672..88760 | + | 1089 | WP_024171602.1 | putative hexosyltransferase CapU | - |
| CXX41_RS26145 () | 88765..89715 | + | 951 | WP_023486370.1 | virulence factor VirK | - |
| CXX41_RS26150 () | 89812..90237 | + | 426 | WP_000436083.1 | IS66 family transposase IS682 | Transposase |
| CXX41_RS26155 () | 90234..90584 | + | 351 | WP_000624720.1 | IS66 family transposase ISEc23 | Transposase |
| CXX41_RS26160 () | 90615..92228 | + | 1614 | WP_129547475.1 | IS66 family transposase ISEc23 | Transposase |
| CXX41_RS26165 () | 92260..92805 | + | 546 | Protein_108 | IS66 family transposase ISEc47 | Transposase |
| CXX41_RS26170 () | 92837..93271 | + | 435 | WP_001595158.1 | DUF1380 family protein | - |
| CXX41_RS26175 () | 93316..93879 | + | 564 | Protein_110 | hypothetical protein | - |
| CXX41_RS26180 () | 93910..95523 | - | 1614 | WP_099492829.1 | IS66 family transposase ISEc23 | Transposase |
| CXX41_RS26185 () | 95554..95904 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| CXX41_RS26190 () | 95901..96326 | - | 426 | WP_032334740.1 | IS66 family transposase IS682 | Transposase |
| CXX41_RS26195 () | 96422..96598 | + | 177 | Protein_114 | antirestriction protein | - |
| CXX41_RS26855 () | 96585..96817 | - | 233 | Protein_115 | hypothetical protein | - |
| CXX41_RS26210 () | 97497..97727 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| CXX41_RS26215 () | 97779..99140 | + | 1362 | WP_032201446.1 | DUF3560 domain-containing protein | - |
| CXX41_RS26220 () | 99187..99750 | + | 564 | WP_032201448.1 | class I SAM-dependent methyltransferase | - |
| CXX41_RS26860 () | 99750..100064 | + | 315 | WP_207212907.1 | hypothetical protein | - |
| CXX41_RS26240 () | 100779..101807 | - | 1029 | WP_001744774.1 | IS110 family transposase IS1663 | Transposase |
| CXX41_RS26245 () | 102058..102420 | + | 363 | WP_000107524.1 | hypothetical protein | - |
| CXX41_RS26250 () | 102380..102622 | + | 243 | WP_000540593.1 | hypothetical protein | - |
| CXX41_RS26865 () | 102799..103179 | + | 381 | WP_207212909.1 | hypothetical protein | - |
| CXX41_RS26260 () | 103424..105037 | - | 1614 | WP_001392052.1 | IS66 family transposase ISEc43 | Transposase |
| CXX41_RS26265 () | 105068..105418 | - | 351 | WP_001594393.1 | IS66 family transposase ISEc47 | Transposase |
| CXX41_RS26270 () | 105415..105849 | - | 435 | WP_001309734.1 | IS66 family transposase ISEc43 | Transposase |
| CXX41_RS26275 () | 105929..106427 | - | 499 | Protein_127 | IS3 family transposase IS1203 | Transposase |
| CXX41_RS26280 () | 106635..107879 | + | 1245 | WP_024191431.1 | hypothetical protein | - |
| CXX41_RS26705 () | 108249..108398 | + | 150 | WP_001424616.1 | hypothetical protein | - |
| CXX41_RS26285 () | 108594..108733 | - | 140 | Protein_130 | IS91 family transposase IS91 | Transposase |
| CXX41_RS26295 () | 108995..109429 | + | 435 | WP_001309734.1 | IS66 family transposase ISEc43 | Transposase |
| CXX41_RS26300 () | 109426..109776 | + | 351 | WP_001464094.1 | IS66 family transposase IS682 | Transposase |
| CXX41_RS26305 () | 109807..111399 | + | 1593 | WP_129547478.1 | IS66 family transposase ISEc47 | Transposase |
| CXX41_RS26310 () | 111431..111952 | - | 522 | Protein_134 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CXX41_RS26315 () | 112204..112401 | + | 198 | Protein_135 | IS3 family transposase IS2 | Transposase |
| CXX41_RS26320 () | 112490..112915 | + | 426 | WP_000436083.1 | IS66 family transposase IS682 | Transposase |
| CXX41_RS26325 () | 112912..113262 | + | 351 | WP_000624720.1 | IS66 family transposase ISEc23 | Transposase |
| CXX41_RS26330 () | 113293..114906 | + | 1614 | WP_099590316.1 | IS66 family transposase ISEc43 | Transposase |
| CXX41_RS26870 () | 115048..116413 | - | 1366 | Protein_139 | IS66 family transposase ISCro1 | Transposase |
| CXX41_RS26340 () | 116415..117313 | - | 899 | Protein_140 | IS3 family transposase ISEc48 | Transposase |
| CXX41_RS26350 () | 117587..117943 | - | 357 | WP_071600075.1 | Protein CexE | VF |
| CXX41_RS26370 () | 119672..120001 | + | 330 | WP_064754141.1 | hypothetical protein | - |
| CXX41_RS26375 () | 120001..120569 | + | 569 | Protein_144 | IS91 family transposase IS91 | Transposase |
| CXX41_RS26380 () | 120778..121827 | + | 1050 | Protein_145 | IS21 family transposase ISSso4 | Transposase |
| CXX41_RS26385 () | 121937..122353 | - | 417 | Protein_146 | IS66 family transposase ISCro1 | Transposase |
| CXX41_RS26395 () | 122647..122865 | - | 219 | WP_001595189.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| CXX41_RS26400 () | 123373..123522 | + | 150 | Protein_148 | IS3 family transposase ISKpn37 | Transposase |
| CXX41_RS26405 () | 123646..124134 | + | 489 | WP_001595191.1 | IS3 family transposase ISBope1 | Transposase |
| CXX41_RS26410 () | 124194..124619 | + | 426 | WP_157774462.1 | IS3 family transposase ISEcB1 | Transposase |
| CXX41_RS26415 () | 124574..124816 | - | 243 | Protein_151 | hypothetical protein | - |
| CXX41_RS26725 () | 124865..125020 | - | 156 | WP_000074142.1 | hypothetical protein | - |
| CXX41_RS26420 () | 125101..126252 | - | 1152 | WP_001702847.1 | IS30 family transposase IS30D | Transposase |
| CXX41_RS26425 () | 126317..126577 | - | 261 | Protein_154 | IS3 family transposase ISSfl10 | Transposase |
| CXX41_RS26430 () | 126639..129476 | + | 2838 | Protein_155 | Multifunctional conjugation protein TraI | Relaxase |
| CXX41_RS26435 () | 129494..130059 | + | 566 | Protein_156 | DUF2726 domain-containing protein | - |
| CXX41_RS26440 () | 130056..130787 | + | 732 | WP_001595201.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| CXX41_RS26445 () | 131011..131193 | - | 183 | WP_001393357.1 | hypothetical protein | - |
| - () | 131437..131493 | - | 57 | NuclAT_0 | - | - |
| - () | 131437..131493 | - | 57 | NuclAT_0 | - | - |
| - () | 131437..131493 | - | 57 | NuclAT_0 | - | - |
| - () | 131437..131493 | - | 57 | NuclAT_0 | - | - |
| CXX41_RS26455 () | 131485..131691 | + | 207 | WP_001362723.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| CXX41_RS26460 () | 131975..132235 | + | 261 | WP_000083817.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|