MGE detailed information
MGE type: Prophage MGE length: 23046 bp
Accession: NZ_CP025800 Location: 755488..778533 Organism: Yersinia ruckeri strain SC09 Replicon: chromosome
Accession: NZ_CP025800 Location: 755488..778533 Organism: Yersinia ruckeri strain SC09 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NJ56_RS03395 () | 751766..752050 | - | 285 | WP_038245319.1 | antirestriction protein | - |
| NJ56_RS03400 () | 752400..753350 | - | 951 | WP_038275283.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| NJ56_RS03405 () | 753343..753738 | - | 396 | WP_038245317.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| NJ56_RS03410 () | 753813..754043 | - | 231 | WP_073990333.1 | DUF4942 domain-containing protein | - |
| NJ56_RS03415 () | 754193..754321 | + | 129 | Protein_650 | helix-turn-helix domain-containing protein | - |
| NJ56_RS03420 () | 754357..754455 | + | 99 | Protein_651 | transposase | - |
| NJ56_RS03425 () | 754469..754759 | - | 291 | Protein_652 | transposase | - |
| NJ56_RS03430 () | 754764..755162 | + | 399 | Protein_653 | DDE-type integrase/transposase/recombinase | - |
| NJ56_RS03435 () | 755181..755467 | - | 287 | Protein_654 | hypothetical protein | - |
| NJ56_RS03440 () | 755488..756555 | - | 1068 | WP_038275274.1 | macro domain-containing protein | Antitoxin Detail |
| NJ56_RS03445 () | 756552..757208 | - | 657 | WP_038275272.1 | DUF4433 domain-containing protein | Toxin Detail |
| NJ56_RS03450 () | 757211..757786 | - | 576 | WP_038275270.1 | DUF4433 domain-containing protein | - |
| NJ56_RS03455 () | 757833..758300 | - | 468 | WP_052173072.1 | restriction endonuclease subunit S | - |
| NJ56_RS03460 () | 758564..758854 | - | 291 | WP_038275268.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NJ56_RS03465 () | 758844..759098 | - | 255 | WP_005175264.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| NJ56_RS03470 () | 759272..760531 | - | 1260 | Protein_661 | integrase arm-type DNA-binding domain-containing protein | - |
| NJ56_RS03475 () | 761046..761990 | + | 945 | WP_038275265.1 | hypothetical protein | - |
| NJ56_RS03485 () | 763448..764191 | + | 744 | Protein_664 | IS21-like element helper ATPase IstB | - |
| NJ56_RS03490 () | 764513..766705 | - | 2193 | WP_038275263.1 | S8 family peptidase | - |
| NJ56_RS03495 () | 766698..767780 | - | 1083 | WP_038275262.1 | AAA family ATPase | - |
| NJ56_RS03500 () | 768077..768475 | + | 399 | Protein_667 | IS3 family transposase ISEam1 | Transposase |
| NJ56_RS03505 () | 768906..769535 | + | 630 | WP_052173071.1 | inovirus Gp2 family protein | - |
| NJ56_RS03510 () | 769659..769868 | + | 210 | WP_038275260.1 | AlpA family transcriptional regulator | - |
| NJ56_RS03515 () | 769971..770498 | + | 528 | WP_038275257.1 | hypothetical protein | - |
| NJ56_RS03520 () | 770638..771177 | + | 540 | Protein_671 | hypothetical protein | - |
| NJ56_RS03525 () | 771405..771866 | + | 462 | WP_038275254.1 | hypothetical protein | - |
| NJ56_RS03530 () | 772072..772227 | + | 156 | WP_175539451.1 | hypothetical protein | - |
| NJ56_RS03540 () | 772635..777647 | - | 5013 | WP_199767695.1 | hypothetical protein | - |
| NJ56_RS03545 () | 778138..778533 | - | 396 | WP_038275250.1 | hypothetical protein | - |
| NJ56_RS03550 () | 778830..779288 | - | 459 | WP_038275248.1 | DNA mismatch endonuclease Vsr | - |
| NJ56_RS03555 () | 779503..780939 | + | 1437 | WP_038275247.1 | DNA cytosine methyltransferase | - |
| NJ56_RS03560 () | 781032..782267 | + | 1236 | WP_038275245.1 | restriction endonuclease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|