MGE detailed information
MGE type: Prophage MGE length: 67044 bp
Accession: NZ_CP025747 Location: 2961769..3028812 Organism: Escherichia coli strain ML35 Replicon: chromosome
Accession: NZ_CP025747 Location: 2961769..3028812 Organism: Escherichia coli strain ML35 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1I23_RS15905 () | 2958663..2959412 | + | 750 | WP_000039778.1 | inverse autotransporter beta domain-containing protein | - |
| C1I23_RS26315 () | 2959339..2961353 | + | 2015 | Protein_2923 | Ig-like domain-containing protein | - |
| C1I23_RS15920 () | 2961446..2962674 | + | 1229 | WP_102384962.1 | IS3 family transposase IS2 | Transposase |
| C1I23_RS15925 () | 2962686..2963714 | - | 1029 | Protein_2925 | hypothetical protein | VF |
| C1I23_RS15930 () | 2964387..2965046 | - | 660 | Protein_2926 | tyrosine-type recombinase/integrase | - |
| C1I23_RS15935 () | 2965183..2965926 | - | 744 | Protein_2927 | IS21 family transposase IS100kyp | Transposase |
| C1I23_RS15940 () | 2966012..2966719 | - | 708 | Protein_2928 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| C1I23_RS15945 () | 2966700..2967309 | - | 610 | Protein_2929 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| C1I23_RS15955 () | 2967631..2968844 | - | 1214 | Protein_2930 | IS3 family transposase IS629 | Transposase |
| C1I23_RS15965 () | 2969374..2970540 | + | 1167 | WP_000772446.1 | hypothetical protein | VF |
| C1I23_RS15970 () | 2970540..2971511 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C1I23_RS15980 () | 2972163..2973065 | + | 903 | WP_077816398.1 | DUF1281 domain-containing protein | - |
| C1I23_RS15985 () | 2973062..2973374 | + | 313 | Protein_2934 | hypothetical protein | - |
| C1I23_RS15990 () | 2973451..2974134 | + | 684 | Protein_2935 | DNA methylase | - |
| C1I23_RS15995 () | 2974135..2974356 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| C1I23_RS16000 () | 2974370..2974804 | + | 435 | WP_000274421.1 | DUF1380 family protein | - |
| C1I23_RS26320 () | 2974849..2975619 | + | 771 | WP_199766327.1 | hypothetical protein | - |
| C1I23_RS16015 () | 2975923..2976225 | + | 303 | WP_122998873.1 | antirestriction protein | - |
| C1I23_RS16020 () | 2976272..2976694 | + | 423 | WP_024239105.1 | DUF1380 family protein | - |
| C1I23_RS16025 () | 2976691..2976882 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| C1I23_RS26325 () | 2976852..2977363 | - | 512 | Protein_2942 | hypothetical protein | - |
| C1I23_RS16040 () | 2977681..2978133 | + | 453 | WP_021569034.1 | single-stranded DNA-binding protein | - |
| C1I23_RS16045 () | 2978190..2978423 | + | 234 | WP_024239188.1 | DUF905 family protein | - |
| C1I23_RS16050 () | 2978489..2979860 | + | 1372 | Protein_2945 | plasmid SOS inhibition protein A | - |
| - () | 2979829..2980027 | + | 199 | NuclAT_1 | - | Antitoxin Detail |
| - () | 2979829..2980027 | + | 199 | NuclAT_1 | - | Antitoxin Detail |
| - () | 2979829..2980027 | + | 199 | NuclAT_1 | - | Antitoxin Detail |
| - () | 2979829..2980027 | + | 199 | NuclAT_1 | - | Antitoxin Detail |
| C1I23_RS16055 () | 2980092..2980250 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| C1I23_RS26330 () | 2980918..2981124 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| C1I23_RS16065 () | 2981149..2981436 | + | 288 | WP_021569031.1 | hypothetical protein | - |
| C1I23_RS16070 () | 2981555..2982376 | + | 822 | WP_024239203.1 | DUF945 domain-containing protein | - |
| C1I23_RS16075 () | 2982671..2983181 | - | 511 | Protein_2950 | hypothetical protein | VF |
| C1I23_RS16080 () | 2983594..2983977 | + | 384 | WP_021569028.1 | relaxosome protein TraM | - |
| C1I23_RS16085 () | 2984164..2984616 | + | 453 | Protein_2952 | conjugal transfer transcriptional regulator TraJ | - |
| C1I23_RS16090 () | 2984655..2985868 | - | 1214 | Protein_2953 | IS3 family transposase IS629 | Transposase |
| C1I23_RS16095 () | 2986193..2987389 | - | 1197 | WP_024239138.1 | IS110 family transposase ISEc20 | Transposase |
| C1I23_RS16105 () | 2987755..2987970 | + | 216 | WP_024165672.1 | class II holin family protein | - |
| C1I23_RS16110 () | 2987975..2988319 | + | 345 | WP_000731192.1 | YdfR family protein | - |
| C1I23_RS16115 () | 2988370..2988900 | + | 531 | Protein_2957 | lysozyme | - |
| C1I23_RS16125 () | 2989058..2989240 | + | 183 | WP_072164699.1 | hypothetical protein | - |
| C1I23_RS26135 () | 2989253..2989386 | + | 134 | Protein_2959 | hypothetical protein | - |
| C1I23_RS26140 () | 2989614..2989799 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| C1I23_RS16140 () | 2990325..2990639 | + | 315 | WP_001303878.1 | PerC family transcriptional regulator | - |
| C1I23_RS16145 () | 2990716..2991148 | + | 433 | Protein_2962 | T3SS effector protein NleH | - |
| C1I23_RS16155 () | 2991421..2992296 | + | 876 | WP_096843318.1 | hypothetical protein | VF |
| C1I23_RS16160 () | 2992385..2993598 | + | 1214 | Protein_2964 | IS3 family transposase IS629 | Transposase |
| C1I23_RS16165 () | 2993657..2994264 | + | 608 | Protein_2965 | IS3 family transposase ISEc27 | Transposase |
| C1I23_RS16175 () | 2994542..2994754 | + | 213 | WP_000402944.1 | hypothetical protein | - |
| C1I23_RS16180 () | 2994926..2995177 | + | 252 | WP_001132890.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C1I23_RS16185 () | 2995174..2995461 | + | 288 | WP_001270415.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1I23_RS16190 () | 2995740..2996720 | + | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| C1I23_RS16200 () | 2997194..2997496 | + | 303 | WP_032146770.1 | hypothetical protein | VF |
| C1I23_RS16205 () | 2997516..2997840 | + | 325 | Protein_2971 | hypothetical protein | - |
| C1I23_RS16210 () | 2997911..2998189 | - | 279 | Protein_2972 | transposase | - |
| C1I23_RS16220 () | 2998420..2999109 | - | 690 | Protein_2973 | IS66 family transposase IS682 | Transposase |
| C1I23_RS16225 () | 2999461..3000051 | - | 591 | WP_032258008.1 | hypothetical protein | VF |
| C1I23_RS16230 () | 3000224..3000865 | + | 642 | WP_102597179.1 | hypothetical protein | VF |
| C1I23_RS16235 () | 3001004..3005098 | - | 4095 | WP_102597180.1 | hypothetical protein | VF |
| C1I23_RS16240 () | 3005593..3006078 | + | 486 | Protein_2977 | IS3 family transposase IS629 | Transposase |
| C1I23_RS16245 () | 3006187..3007395 | - | 1209 | WP_102597181.1 | secretion protein EspV | - |
| C1I23_RS16250 () | 3007538..3007821 | - | 284 | Protein_2979 | YkgJ family cysteine cluster protein | - |
| C1I23_RS16255 () | 3007970..3008269 | - | 300 | Protein_2980 | hypothetical protein | - |
| C1I23_RS16260 () | 3008363..3009591 | + | 1229 | WP_102384962.1 | IS3 family transposase IS2 | Transposase |
| C1I23_RS16270 () | 3009884..3010936 | - | 1053 | WP_000480498.1 | glycosyltransferase family 9 protein | - |
| C1I23_RS16275 () | 3011251..3012567 | + | 1317 | WP_000378584.1 | shikimate transporter | - |
| C1I23_RS16280 () | 3012669..3014123 | + | 1455 | WP_001060244.1 | AMP nucleosidase | - |
| C1I23_RS16285 () | 3014466..3015182 | + | 717 | WP_000532923.1 | hypothetical protein | VF |
| C1I23_RS16300 () | 3015814..3017457 | - | 1644 | WP_000943916.1 | toxic metabolite efflux MATE transporter YeeO | - |
| C1I23_RS16310 () | 3017575..3018525 | - | 951 | WP_001011013.1 | HTH-type transcriptional regulator Cbl | - |
| C1I23_RS16315 () | 3018627..3019544 | - | 918 | WP_001011466.1 | nitrogen assimilation transcriptional regulator NAC | - |
| C1I23_RS16325 () | 3020001..3020936 | - | 936 | WP_000986331.1 | L,D-transpeptidase | - |
| C1I23_RS16330 () | 3020998..3022077 | - | 1080 | WP_001193786.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| C1I23_RS16335 () | 3022089..3022832 | - | 744 | WP_001297350.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| C1I23_RS16340 () | 3022829..3023374 | - | 546 | WP_045173184.1 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| C1I23_RS16360 () | 3025080..3025328 | + | 249 | Protein_2993 | IS3 family transposase ISEhe3 | Transposase |
| C1I23_RS16365 () | 3025338..3026489 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| C1I23_RS16370 () | 3026632..3027327 | - | 696 | Protein_2995 | IS3 family transposase IS2 | Transposase |
| C1I23_RS16380 () | 3027698..3027847 | - | 150 | WP_052318419.1 | hemolysin activation protein | - |
| C1I23_RS16385 () | 3028606..3028812 | + | 207 | WP_199766328.1 | AlpA family transcriptional regulator | - |
| C1I23_RS16390 () | 3028899..3029501 | + | 603 | WP_000804452.1 | hypothetical protein | - |
| C1I23_RS16405 () | 3029823..3031307 | - | 1485 | WP_001297234.1 | DUF3987 domain-containing protein | - |
| C1I23_RS16415 () | 3032538..3033357 | + | 820 | Protein_3000 | GTPase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|