MGE detailed information
MGE type: Mobilizable plasmid MGE length: 128563 bp
Accession: NZ_CP025458 Location: 1..128563 Organism: Klebsiella pneumoniae strain KP69 Replicon: plasmid p69-2
Accession: NZ_CP025458 Location: 1..128563 Organism: Klebsiella pneumoniae strain KP69 Replicon: plasmid p69-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CYD98_RS29235 () | 108..246 | - | 139 | Protein_0 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| CYD98_RS31215 () | 208..660 | + | 453 | WP_199520042.1 | hypothetical protein | - |
| CYD98_RS29245 () | 821..1765 | + | 945 | WP_011977810.1 | hypothetical protein | - |
| CYD98_RS29250 () | 1802..2194 | + | 393 | WP_011977811.1 | hypothetical protein | - |
| CYD98_RS29255 () | 2252..2773 | + | 522 | WP_013214008.1 | hypothetical protein | - |
| CYD98_RS29260 () | 2819..3022 | + | 204 | WP_011977813.1 | hypothetical protein | - |
| CYD98_RS29265 () | 3052..4056 | + | 1005 | WP_011977814.1 | hypothetical protein | - |
| CYD98_RS29270 () | 4240..5019 | + | 780 | WP_013214009.1 | site-specific integrase | - |
| CYD98_RS29275 () | 5065..5322 | - | 258 | WP_013214010.1 | hypothetical protein | - |
| CYD98_RS31220 () | 5451..5564 | - | 114 | WP_014343462.1 | hypothetical protein | - |
| CYD98_RS29280 () | 6100..6966 | + | 867 | WP_004118283.1 | replication initiation protein | - |
| CYD98_RS29290 () | 8076..9281 | + | 1206 | WP_011977818.1 | AAA family ATPase | - |
| CYD98_RS29295 () | 9281..10255 | + | 975 | WP_011977819.1 | ParB/RepB/Spo0J family partition protein | - |
| CYD98_RS29300 () | 10337..11608 | - | 1272 | WP_013214011.1 | Y-family DNA polymerase | - |
| CYD98_RS29305 () | 11608..12039 | - | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CYD98_RS29315 () | 12446..13933 | + | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| CYD98_RS29320 () | 14182..15153 | + | 972 | WP_004152353.1 | mediator of plasmid stability | - |
| CYD98_RS29325 () | 15156..15827 | + | 672 | WP_013214012.1 | plasmid partitioning/stability family protein | - |
| CYD98_RS29330 () | 15890..16120 | + | 231 | WP_001568040.1 | hypothetical protein | - |
| CYD98_RS29335 () | 16557..17258 | + | 702 | WP_001568041.1 | DNA methylase | - |
| CYD98_RS29340 () | 17258..17479 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| CYD98_RS29345 () | 17489..17908 | + | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| CYD98_RS29350 () | 17962..18729 | + | 768 | WP_013214013.1 | hypothetical protein | - |
| CYD98_RS31225 () | 19410..19838 | + | 429 | WP_001568045.1 | antirestriction protein | - |
| CYD98_RS29360 () | 19881..20387 | + | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| CYD98_RS29365 () | 20430..20621 | + | 192 | WP_001568047.1 | hypothetical protein | - |
| CYD98_RS29370 () | 20809..21063 | + | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| CYD98_RS29375 () | 21098..21418 | + | 321 | WP_001568049.1 | hypothetical protein | - |
| CYD98_RS29395 () | 22098..22325 | + | 228 | WP_001568050.1 | hypothetical protein | - |
| CYD98_RS29400 () | 22417..22647 | + | 231 | WP_001568051.1 | hypothetical protein | - |
| CYD98_RS29405 () | 22699..24054 | + | 1356 | WP_014343515.1 | DUF3560 domain-containing protein | - |
| CYD98_RS29410 () | 24102..24665 | + | 564 | WP_014343514.1 | methyltransferase | - |
| CYD98_RS29430 () | 25498..26040 | + | 543 | WP_014343512.1 | single-stranded DNA-binding protein | - |
| CYD98_RS29435 () | 26089..26337 | + | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| CYD98_RS29440 () | 26407..28464 | + | 2058 | WP_015493064.1 | ParB/RepB/Spo0J family partition protein | - |
| CYD98_RS29445 () | 28509..28940 | + | 432 | WP_001568057.1 | conjugation system SOS inhibitor PsiB | - |
| CYD98_RS29450 () | 28937..29665 | + | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| CYD98_RS29455 () | 29662..29988 | + | 327 | WP_013023807.1 | hypothetical protein | - |
| CYD98_RS29460 () | 30044..30418 | + | 375 | WP_014343510.1 | hypothetical protein | - |
| CYD98_RS29470 () | 30646..30804 | + | 159 | WP_014343509.1 | type I toxin-antitoxin system Hok family toxin | - |
| CYD98_RS29475 () | 31497..31769 | + | 273 | WP_040245921.1 | hypothetical protein | - |
| CYD98_RS29480 () | 31766..32116 | + | 351 | WP_040245917.1 | hypothetical protein | - |
| CYD98_RS29485 () | 32131..32448 | + | 318 | WP_014343505.1 | hypothetical protein | - |
| CYD98_RS29495 () | 33289..33645 | + | 357 | WP_014343501.1 | hypothetical protein | - |
| CYD98_RS29500 () | 33706..33918 | + | 213 | WP_014343500.1 | hypothetical protein | - |
| CYD98_RS29505 () | 33929..34153 | + | 225 | WP_014343499.1 | hypothetical protein | - |
| CYD98_RS29510 () | 34234..34554 | + | 321 | WP_014343498.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CYD98_RS29515 () | 34544..34822 | + | 279 | WP_004152721.1 | helix-turn-helix domain-containing protein | - |
| CYD98_RS29530 () | 35508..36212 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CYD98_RS29540 () | 36541..37491 | + | 951 | WP_015493085.1 | Recombination-promoting nuclease RpnA | VF |
| CYD98_RS29545 () | 37488..38099 | - | 612 | WP_015493086.1 | DUF2913 family protein | - |
| CYD98_RS29550 () | 38096..38491 | - | 396 | WP_015493087.1 | hypothetical protein | - |
| CYD98_RS29555 () | 38544..38936 | - | 393 | Protein_52 | 3'-5' exonuclease | - |
| CYD98_RS29560 () | 39005..39985 | + | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| CYD98_RS29565 () | 40132..40509 | + | 378 | Protein_54 | restriction endonuclease | - |
| CYD98_RS29570 () | 40637..41194 | + | 558 | WP_042934582.1 | hypothetical protein | - |
| CYD98_RS29575 () | 41663..42367 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CYD98_RS29580 () | 42500..43141 | - | 642 | WP_001011939.1 | Chloramphenicol acetyltransferase 2 | ARG |
| CYD98_RS29585 () | 43291..43791 | - | 501 | WP_001239317.1 | hypothetical protein | - |
| CYD98_RS29590 () | 43871..44575 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CYD98_RS30580 () | 44581..44721 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| CYD98_RS29600 () | 45207..45944 | + | 738 | WP_001446887.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CYD98_RS29605 () | 45941..46165 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| CYD98_RS29610 () | 46287..46463 | + | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| CYD98_RS29615 () | 46645..47649 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| CYD98_RS29620 () | 47728..49443 | - | 1716 | Protein_65 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| CYD98_RS29625 () | 49507..50211 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CYD98_RS29635 () | 50291..50740 | + | 450 | Protein_67 | PAS domain-containing protein | - |
| CYD98_RS29640 () | 50808..51905 | - | 1098 | Protein_68 | TonB-dependent receptor | - |
| CYD98_RS29645 () | 51962..52930 | - | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| CYD98_RS29650 () | 52965..53840 | - | 876 | WP_013188475.1 | Beta-lactamase Toho-1 | ARG |
| CYD98_RS29655 () | 54090..54281 | - | 192 | Protein_71 | transposase | - |
| CYD98_RS29660 () | 54351..55055 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CYD98_RS29665 () | 55121..55666 | + | 546 | Protein_73 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CYD98_RS29670 () | 55702..56117 | - | 416 | Protein_74 | IS1 family transposase | - |
| CYD98_RS29685 () | 56366..56767 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| CYD98_RS30585 () | 56700..56957 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| CYD98_RS29690 () | 57050..57703 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| CYD98_RS29700 () | 58642..59499 | - | 858 | WP_142295464.1 | incFII family plasmid replication initiator RepA | - |
| CYD98_RS29705 () | 59492..59566 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| CYD98_RS29715 () | 59811..60059 | - | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| CYD98_RS29720 () | 60343..60492 | - | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 60537..60596 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 60537..60596 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 60537..60596 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 60537..60596 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| CYD98_RS29730 () | 60797..61027 | - | 231 | WP_001736714.1 | hypothetical protein | - |
| CYD98_RS29735 () | 61191..61790 | - | 600 | WP_032083981.1 | hypothetical protein | - |
| CYD98_RS29740 () | 62176..62376 | - | 201 | WP_015059022.1 | hypothetical protein | - |
| CYD98_RS29745 () | 62508..63068 | - | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| CYD98_RS29750 () | 63123..63869 | - | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| CYD98_RS29755 () | 63889..64050 | - | 162 | Protein_87 | DNA helicase | - |
| CYD98_RS29760 () | 64114..64818 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CYD98_RS29765 () | 64871..64936 | + | 66 | Protein_89 | helix-turn-helix domain-containing protein | - |
| CYD98_RS29770 () | 64939..66198 | + | 1260 | Protein_90 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| CYD98_RS29780 () | 66250..66954 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CYD98_RS29795 () | 67410..68000 | - | 591 | Protein_92 | IS91 family transposase ISSbo1 | Transposase |
| CYD98_RS29800 () | 68065..68769 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CYD98_RS29805 () | 68820..69437 | - | 618 | Protein_94 | IS91 family transposase ISSbo1 | Transposase |
| CYD98_RS29810 () | 69447..69635 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| CYD98_RS29815 () | 69727..70263 | + | 537 | WP_064441864.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| CYD98_RS29820 () | 70446..71306 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| CYD98_RS29825 () | 71476..72231 | + | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| CYD98_RS29830 () | 72312..72593 | - | 282 | WP_015059004.1 | sodium/hydrogen exchanger | - |
| CYD98_RS29835 () | 72681..73385 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CYD98_RS31230 () | 73451..73516 | + | 66 | Protein_101 | IS1 family transposase | - |
| CYD98_RS29855 () | 74965..75199 | + | 235 | Protein_102 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CYD98_RS29860 () | 75327..75608 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| CYD98_RS29865 () | 75731..76081 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| CYD98_RS29870 () | 76084..77046 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| CYD98_RS29875 () | 77193..77486 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| CYD98_RS29885 () | 77563..78246 | + | 684 | WP_000085883.1 | DNA methylase | - |
| CYD98_RS29890 () | 78247..78468 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| CYD98_RS29895 () | 78482..78916 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| CYD98_RS31235 () | 78967..79743 | + | 777 | WP_001383963.1 | hypothetical protein | - |
| CYD98_RS29910 () | 80161..80586 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| CYD98_RS29915 () | 80633..81055 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| CYD98_RS29920 () | 81052..81243 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| CYD98_RS29925 () | 81557..83224 | - | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| CYD98_RS29935 () | 84624..84854 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| CYD98_RS29940 () | 84906..86267 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| CYD98_RS29945 () | 86314..86877 | + | 564 | WP_015059007.1 | class I SAM-dependent methyltransferase | - |
| CYD98_RS29970 () | 87732..88259 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| CYD98_RS29975 () | 88317..88550 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| CYD98_RS29980 () | 88611..90634 | + | 2024 | Protein_120 | ParB/RepB/Spo0J family partition protein | - |
| CYD98_RS29985 () | 90703..91137 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| CYD98_RS29990 () | 91134..91853 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - () | 91865..92089 | + | 225 | NuclAT_0 | - | - |
| - () | 91865..92089 | + | 225 | NuclAT_0 | - | - |
| - () | 91865..92089 | + | 225 | NuclAT_0 | - | - |
| - () | 91865..92089 | + | 225 | NuclAT_0 | - | - |
| - () | 92022..92087 | + | 66 | - | - | Antitoxin Detail |
| CYD98_RS30590 () | 92133..92291 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| CYD98_RS31240 () | 92529..92906 | - | 378 | Protein_124 | hypothetical protein | - |
| CYD98_RS30015 () | 93206..93502 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| CYD98_RS30020 () | 93613..94434 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| CYD98_RS30025 () | 94731..95378 | - | 648 | WP_015059008.1 | hypothetical protein | VF |
| CYD98_RS30030 () | 95655..96038 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| CYD98_RS30035 () | 96229..96915 | + | 687 | WP_015059009.1 | PAS domain-containing protein | - |
| CYD98_RS30040 () | 97009..97236 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| CYD98_RS30045 () | 97270..97635 | + | 366 | WP_021519752.1 | type IV conjugative transfer system pilin TraA | - |
| CYD98_RS30050 () | 97650..97961 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| CYD98_RS30055 () | 97983..98549 | + | 567 | WP_000399794.1 | type IV conjugative transfer system protein TraE | - |
| CYD98_RS30060 () | 98560..99264 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| CYD98_RS30065 () | 99264..99521 | + | 258 | WP_101307356.1 | IS6 family transposase IS15 | Transposase |
| CYD98_RS30070 () | 99533..100237 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CYD98_RS30075 () | 100291..100614 | - | 324 | Protein_137 | class II aldolase/adducin family protein | - |
| CYD98_RS30080 () | 100607..101859 | - | 1253 | Protein_138 | four-carbon acid sugar kinase family protein | - |
| CYD98_RS30085 () | 101871..102773 | - | 903 | WP_002903955.1 | NAD(P)-dependent oxidoreductase | - |
| CYD98_RS30095 () | 103035..103796 | + | 762 | WP_002210513.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| CYD98_RS30100 () | 103817..104677 | - | 861 | WP_002904004.1 | Beta-lactamase SHV-2 | ARG |
| CYD98_RS31245 () | 104814..104882 | + | 69 | Protein_142 | IS6 family transposase | - |
| CYD98_RS30110 () | 104918..106816 | - | 1899 | Protein_143 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CYD98_RS30115 () | 106882..107586 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CYD98_RS30125 () | 107638..108099 | + | 462 | Protein_145 | Tn3 family transposase TnpR_Tn3 | Transposase |
| CYD98_RS30130 () | 108222..109202 | + | 981 | WP_013213985.1 | IS481 family transposase ISKpn27 | Transposase |
| CYD98_RS30135 () | 109478..110359 | + | 882 | WP_004199234.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| CYD98_RS30140 () | 110609..111490 | - | 882 | Protein_148 | IS1182 family transposase ISKpn6 | Transposase |
| CYD98_RS31250 () | 111594..111890 | - | 297 | WP_013213987.1 | transcriptional regulator | - |
| CYD98_RS31255 () | 111936..112091 | - | 156 | WP_013213988.1 | hypothetical protein | - |
| CYD98_RS30150 () | 112219..112644 | - | 426 | WP_013213989.1 | antirestriction protein | - |
| CYD98_RS30155 () | 112755..113033 | - | 279 | WP_013213990.1 | hypothetical protein | - |
| CYD98_RS30160 () | 113567..114184 | - | 618 | Protein_153 | replication protein | - |
| CYD98_RS30165 () | 114576..115136 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| CYD98_RS30170 () | 115140..116213 | + | 1074 | Protein_155 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CYD98_RS30180 () | 116266..116970 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CYD98_RS30185 () | 117035..118207 | - | 1173 | Protein_157 | transposase | - |
| CYD98_RS30195 () | 118282..118950 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| CYD98_RS30200 () | 118986..119222 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| CYD98_RS30205 () | 119219..119581 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| CYD98_RS30210 () | 119599..121293 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| CYD98_RS30215 () | 121345..121767 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| CYD98_RS30220 () | 121803..122078 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| CYD98_RS30225 () | 122092..122442 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| CYD98_RS30230 () | 122514..122948 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| CYD98_RS30235 () | 123027..124031 | + | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| CYD98_RS30240 () | 124311..124583 | - | 273 | Protein_167 | IS5 family transposase ISPan1 | Transposase |
| CYD98_RS30245 () | 124612..125309 | - | 698 | Protein_168 | IS1 family transposase ISKpn14 | Transposase |
| CYD98_RS30250 () | 125565..126587 | - | 1023 | WP_000361404.1 | helicase UvrD | - |
| CYD98_RS30255 () | 126572..128134 | - | 1563 | WP_004206609.1 | AAA family ATPase | - |
| CYD98_RS30260 () | 128208..128363 | - | 156 | Protein_171 | VapC toxin family PIN domain ribonuclease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|