MGE detailed information
MGE type: Conjugative plasmid MGE length: 133281 bp
Accession: NZ_CP025403 Location: 1..133281 Organism: Escherichia coli strain MS8345 Replicon: plasmid pMS8345B
Accession: NZ_CP025403 Location: 1..133281 Organism: Escherichia coli strain MS8345 Replicon: plasmid pMS8345B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MS8345_RS28805 () | 132..872 | + | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| MS8345_RS28810 () | 1157..2134 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| MS8345_RS28820 () | 2880..3203 | + | 324 | Protein_3 | IS21 family transposase IS21 | Transposase |
| MS8345_RS30200 () | 3205..3309 | + | 105 | Protein_4 | AAA family ATPase | - |
| MS8345_RS28830 () | 3370..3883 | + | 514 | Protein_5 | DUF4113 domain-containing protein | - |
| MS8345_RS28835 () | 4063..4760 | - | 698 | Protein_6 | IS1 family transposase | - |
| MS8345_RS28850 () | 5116..6030 | + | 915 | WP_101408954.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| MS8345_RS28855 () | 6030..6857 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| MS8345_RS28860 () | 6854..7711 | + | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| MS8345_RS28865 () | 7708..8565 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| MS8345_RS28870 () | 8799..9056 | - | 258 | Protein_11 | Tn3 family transposase | - |
| MS8345_RS28875 () | 9054..9467 | + | 414 | Protein_12 | phosphopyruvate hydratase | - |
| MS8345_RS28890 () | 9966..11179 | + | 1214 | WP_139371347.1 | IS3 family transposase IS629 | Transposase |
| MS8345_RS28895 () | 11223..11501 | + | 279 | Protein_14 | fluoride efflux transporter CrcB | - |
| MS8345_RS28900 () | 11881..13074 | - | 1194 | WP_000095526.1 | MFS transporter | - |
| MS8345_RS28905 () | 13210..14934 | + | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| MS8345_RS28910 () | 14935..15882 | + | 948 | WP_000011907.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| MS8345_RS28915 () | 15882..17624 | + | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| MS8345_RS28920 () | 17621..18898 | + | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| MS8345_RS28925 () | 18980..21181 | + | 2202 | WP_000973517.1 | Ferric aerobactin receptor | VF |
| MS8345_RS28940 () | 21706..22403 | + | 698 | Protein_21 | IS1 family transposase IS1G | Transposase |
| MS8345_RS28945 () | 22601..23080 | - | 480 | WP_000190053.1 | hypothetical protein | - |
| MS8345_RS28950 () | 23198..23647 | + | 450 | WP_000238252.1 | hypothetical protein | - |
| MS8345_RS28955 () | 24273..25775 | + | 1503 | WP_000715081.1 | hypothetical protein | - |
| MS8345_RS28960 () | 26001..26192 | + | 192 | WP_000925960.1 | hypothetical protein | - |
| MS8345_RS28970 () | 27800..28497 | + | 698 | Protein_26 | IS1 family transposase | - |
| MS8345_RS28975 () | 28797..29963 | + | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| MS8345_RS28980 () | 29963..30934 | + | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| MS8345_RS30205 () | 31746..32084 | + | 339 | WP_001513511.1 | hypothetical protein | - |
| MS8345_RS28990 () | 32153..32728 | + | 576 | WP_000343071.1 | hypothetical protein | - |
| MS8345_RS28995 () | 32741..32953 | + | 213 | WP_000092896.1 | hypothetical protein | - |
| MS8345_RS29000 () | 33132..34345 | + | 1214 | WP_162901046.1 | IS3 family transposase IS629 | Transposase |
| MS8345_RS30210 () | 34414..34742 | - | 329 | Protein_33 | pilus assembly protein | - |
| MS8345_RS29015 () | 35420..35650 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| MS8345_RS29020 () | 35702..37063 | + | 1362 | WP_000170680.1 | DUF3560 domain-containing protein | - |
| MS8345_RS29025 () | 37111..37674 | + | 564 | WP_001332335.1 | class I SAM-dependent methyltransferase | - |
| MS8345_RS29035 () | 37760..38179 | - | 420 | WP_015056142.1 | hypothetical protein | - |
| MS8345_RS29045 () | 38480..39100 | + | 621 | WP_101408957.1 | single-stranded DNA-binding protein | - |
| MS8345_RS29050 () | 39063..39296 | + | 234 | WP_000005988.1 | DUF905 family protein | - |
| MS8345_RS29055 () | 39360..41318 | + | 1959 | WP_000117202.1 | ParB/RepB/Spo0J family partition protein | - |
| MS8345_RS29060 () | 41373..41807 | + | 435 | WP_000845922.1 | conjugation system SOS inhibitor PsiB | - |
| MS8345_RS29065 () | 41804..42523 | + | 720 | WP_000994098.1 | plasmid SOS inhibition protein A | - |
| - () | 42535..42746 | + | 212 | NuclAT_0 | - | - |
| - () | 42535..42746 | + | 212 | NuclAT_0 | - | - |
| - () | 42535..42746 | + | 212 | NuclAT_0 | - | - |
| - () | 42535..42746 | + | 212 | NuclAT_0 | - | - |
| MS8345_RS29070 () | 42799..42960 | + | 162 | WP_001332444.1 | type I toxin-antitoxin system Hok family toxin | - |
| MS8345_RS30215 () | 43261..43558 | - | 298 | Protein_44 | hypothetical protein | - |
| MS8345_RS29090 () | 43859..44146 | + | 288 | WP_000107520.1 | hypothetical protein | - |
| MS8345_RS29095 () | 44265..45086 | + | 822 | WP_001234468.1 | DUF945 domain-containing protein | - |
| MS8345_RS29100 () | 45382..45972 | - | 591 | Protein_47 | hypothetical protein | VF |
| MS8345_RS29105 () | 46306..46689 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| MS8345_RS29110 () | 46876..47565 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| MS8345_RS29115 () | 47664..48059 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| MS8345_RS29120 () | 48092..48457 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| MS8345_RS29125 () | 48472..48783 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| MS8345_RS29130 () | 48805..49371 | + | 567 | WP_000399785.1 | type IV conjugative transfer system protein TraE | - |
| MS8345_RS29135 () | 49382..50086 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| MS8345_RS29140 () | 50086..51513 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| MS8345_RS29145 () | 51503..52093 | + | 591 | WP_000002792.1 | conjugal transfer protein TraP | - |
| MS8345_RS29150 () | 52047..52277 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| MS8345_RS29155 () | 52289..52540 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| MS8345_RS29160 () | 52537..53052 | + | 516 | WP_000809841.1 | type IV conjugative transfer system lipoprotein TraV | - |
| MS8345_RS29165 () | 53187..53255 | + | 69 | Protein_60 | conjugal transfer protein TraR | - |
| MS8345_RS29170 () | 53309..54522 | + | 1214 | WP_139371347.1 | IS3 family transposase IS629 | Transposase |
| MS8345_RS29175 () | 54506..54721 | + | 216 | WP_101408958.1 | conjugal transfer protein TraR | - |
| MS8345_RS29180 () | 54881..57508 | + | 2628 | WP_001064252.1 | type IV secretion system protein TraC | - |
| MS8345_RS29185 () | 57505..57891 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| MS8345_RS29190 () | 57888..58520 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| MS8345_RS29195 () | 58517..59509 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| MS8345_RS29200 () | 59518..60156 | + | 639 | WP_000777693.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| MS8345_RS29205 () | 60153..61961 | + | 1809 | WP_000821846.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| MS8345_RS29210 () | 61988..62245 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| MS8345_RS29215 () | 62238..62981 | + | 744 | WP_001030389.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| MS8345_RS29220 () | 62997..63344 | + | 348 | WP_001287676.1 | conjugal transfer protein TrbA | - |
| MS8345_RS29225 () | 63447..64418 | + | 972 | WP_170386723.1 | IS30 family transposase ISApl1 | Transposase |
| MS8345_RS29230 () | 64535..64819 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| MS8345_RS29235 () | 64806..65351 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| MS8345_RS29240 () | 65281..65643 | + | 363 | WP_002430925.1 | P-type conjugative transfer protein TrbJ | - |
| MS8345_RS29245 () | 65643..66986 | + | 1344 | WP_198557175.1 | conjugal transfer protein TraH | - |
| MS8345_RS29250 () | 66983..69805 | + | 2823 | WP_101408960.1 | conjugal transfer mating pair stabilization protein TraG | - |
| MS8345_RS29255 () | 69820..70323 | + | 504 | WP_000605510.1 | hypothetical protein | - |
| MS8345_RS29260 () | 70355..71086 | + | 732 | WP_001447147.1 | complement resistance protein TraT | - |
| MS8345_RS29265 () | 71338..73536 | + | 2199 | WP_001496532.1 | type IV conjugative transfer system coupling protein TraD | - |
| MS8345_RS29270 () | 73536..78806 | + | 5271 | WP_101408961.1 | Multifunctional conjugation protein TraI | Relaxase |
| MS8345_RS29275 () | 78826..79572 | + | 747 | WP_000205759.1 | conjugal transfer pilus acetylase TraX | - |
| MS8345_RS29280 () | 79627..80187 | + | 561 | WP_000139359.1 | fertility inhibition protein FinO | - |
| MS8345_RS29285 () | 80325..80537 | + | 213 | WP_001311693.1 | hypothetical protein | - |
| MS8345_RS29290 () | 80780..81181 | + | 402 | WP_001233870.1 | thermonuclease family protein | - |
| MS8345_RS29295 () | 81226..81486 | + | 261 | WP_000083818.1 | replication regulatory protein RepA | - |
| MS8345_RS29305 () | 81712..81786 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| MS8345_RS29310 () | 81779..82636 | + | 858 | WP_000130940.1 | incFII family plasmid replication initiator RepA | - |
| MS8345_RS29325 () | 83552..83821 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| MS8345_RS29330 () | 83818..84099 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| MS8345_RS29335 () | 84145..84993 | + | 849 | WP_001057989.1 | 3'-5' exonuclease | - |
| MS8345_RS29340 () | 85179..87059 | + | 1881 | WP_001283335.1 | colicin | - |
| MS8345_RS29345 () | 87081..87416 | - | 336 | WP_001080729.1 | colicin 1A immunity protein | - |
| MS8345_RS29355 () | 87545..87802 | + | 258 | WP_000142431.1 | hypothetical protein | - |
| MS8345_RS29360 () | 87822..88412 | - | 591 | WP_001350923.1 | hypothetical protein | - |
| MS8345_RS29365 () | 88409..88669 | - | 261 | WP_000343091.1 | hypothetical protein | - |
| MS8345_RS29370 () | 88962..89414 | + | 453 | WP_000670963.1 | N-acetyltransferase | - |
| MS8345_RS29375 () | 89470..89736 | - | 267 | WP_001017350.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| MS8345_RS29380 () | 89733..90002 | - | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| MS8345_RS29385 () | 90004..90781 | - | 778 | Protein_100 | gfo/Idh/MocA family oxidoreductase | - |
| MS8345_RS29935 () | 90942..91178 | + | 237 | WP_001323890.1 | colicin V immunity protein | - |
| MS8345_RS29395 () | 91156..91467 | + | 312 | WP_001259758.1 | colicin V | - |
| MS8345_RS29400 () | 91637..93751 | - | 2115 | WP_001183604.1 | peptidase domain-containing ABC transporter | - |
| MS8345_RS29405 () | 93726..95000 | - | 1275 | WP_000489608.1 | HlyD family secretion protein | - |
| MS8345_RS29410 () | 95682..95879 | + | 198 | WP_001324224.1 | toxin-antitoxin system protein | Antitoxin Detail |
| MS8345_RS29415 () | 95876..96058 | + | 183 | WP_000969988.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| MS8345_RS29420 () | 96157..96465 | + | 309 | WP_000377483.1 | hypothetical protein | - |
| MS8345_RS29430 () | 97025..98059 | + | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| MS8345_RS29450 () | 98910..101087 | + | 2178 | WP_001222183.1 | Ferric enterobactin receptor | VF |
| MS8345_RS29455 () | 101132..102088 | - | 957 | WP_000271277.1 | Ferri-bacillibactin esterase BesA | VF |
| MS8345_RS29460 () | 102173..103402 | - | 1230 | WP_000933672.1 | Enterochelin esterase | VF |
| MS8345_RS29465 () | 103506..107165 | - | 3660 | WP_001442133.1 | Multidrug efflux ATP-binding/permease protein | VF |
| MS8345_RS29470 () | 107305..108420 | - | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| MS8345_RS29480 () | 109725..110706 | - | 982 | Protein_114 | IS481 family transposase ISKpn28 | Transposase |
| MS8345_RS29490 () | 111309..111508 | + | 200 | Protein_115 | lysis system i-spanin subunit Rz | - |
| MS8345_RS29495 () | 111566..111859 | - | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| MS8345_RS29505 () | 112486..113714 | + | 1229 | WP_112041681.1 | IS3 family transposase IS2 | Transposase |
| MS8345_RS29510 () | 114485..115698 | + | 1214 | WP_139371347.1 | IS3 family transposase IS629 | Transposase |
| MS8345_RS29520 () | 116251..117444 | + | 1194 | WP_000450494.1 | GTP-binding protein | - |
| MS8345_RS29525 () | 117622..117771 | + | 150 | Protein_120 | IS3 family transposase | - |
| MS8345_RS29530 () | 118081..118536 | + | 456 | Protein_121 | ISNCY family transposase ISKpn21 | Transposase |
| MS8345_RS29540 () | 118767..120113 | + | 1347 | WP_000483767.1 | IS4 family transposase IS4 | Transposase |
| MS8345_RS29545 () | 120484..121854 | - | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| MS8345_RS29550 () | 121858..123798 | - | 1941 | WP_000733252.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| MS8345_RS29555 () | 123795..124982 | - | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| MS8345_RS29560 () | 125963..126288 | + | 326 | Protein_126 | IS3 family transposase IS911 | Transposase |
| MS8345_RS29570 () | 127833..127991 | + | 159 | WP_001312823.1 | integrase core domain-containing protein | - |
| MS8345_RS29585 () | 129264..130217 | + | 954 | WP_000280980.1 | Protease 7 | VF |
| MS8345_RS29595 () | 130650..131759 | + | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| MS8345_RS29600 () | 131828..132730 | + | 903 | WP_198557174.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|