MGE detailed information
MGE type: Prophage MGE length: 66251 bp
Accession: NZ_CP024998 Location: 964440..1030690 Organism: Staphylococcus aureus strain 55-99-44 Replicon: chromosome
Accession: NZ_CP024998 Location: 964440..1030690 Organism: Staphylococcus aureus strain 55-99-44 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CU118_RS04645 () | 960464..961843 | - | 1380 | WP_054190649.1 | ATP-dependent DNA helicase | - |
| CU118_RS04650 () | 961833..962786 | - | 954 | WP_054190648.1 | helix-turn-helix domain-containing protein | - |
| CU118_RS04655 () | 962894..963142 | + | 249 | WP_001151997.1 | ferredoxin | - |
| CU118_RS04660 () | 963248..963793 | - | 546 | WP_054190647.1 | ECF transporter S component | - |
| CU118_RS04665 () | 964440..965354 | - | 915 | WP_100793812.1 | DUF1672 domain-containing protein | - |
| CU118_RS04670 () | 965412..966317 | - | 906 | WP_054190756.1 | DUF1672 domain-containing protein | - |
| CU118_RS04675 () | 966408..966593 | - | 186 | WP_000470336.1 | hypothetical protein | - |
| CU118_RS04680 () | 966842..967825 | - | 984 | WP_024937002.1 | Leucotoxin LukDv | VF |
| CU118_RS04685 () | 967821..968759 | - | 939 | WP_000239545.1 | Gamma-hemolysin component C | VF |
| CU118_RS04690 () | 969149..970603 | - | 1455 | WP_100793813.1 | N-acetylmuramoyl-L-alanine amidase | - |
| CU118_RS04695 () | 970614..970916 | - | 303 | WP_000339146.1 | phage holin | - |
| CU118_RS04700 () | 971052..971351 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| CU118_RS04705 () | 971397..971561 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| CU118_RS04710 () | 971554..971943 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| CU118_RS04715 () | 971943..973409 | - | 1467 | WP_054189545.1 | BppU family phage baseplate upper protein | - |
| CU118_RS04720 () | 973409..975319 | - | 1911 | WP_000429558.1 | minor structural protein | - |
| CU118_RS04725 () | 975335..975625 | - | 291 | WP_054189544.1 | hypothetical protein | - |
| CU118_RS04730 () | 975625..977208 | - | 1584 | WP_000384462.1 | prophage endopeptidase tail family protein | - |
| CU118_RS04735 () | 977217..978041 | - | 825 | WP_020444679.1 | phage tail family protein | - |
| CU118_RS04740 () | 978041..984241 | - | 6201 | WP_054189543.1 | phage tail tape measure protein | - |
| CU118_RS04745 () | 984255..984413 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| CU118_RS04750 () | 984455..984805 | - | 351 | WP_000589167.1 | hypothetical protein | - |
| CU118_RS04755 () | 984863..985318 | - | 456 | WP_000169127.1 | Ig domain-containing protein | - |
| CU118_RS04760 () | 985410..986051 | - | 642 | WP_000807536.1 | tail protein | - |
| CU118_RS04765 () | 986086..986481 | - | 396 | WP_001023806.1 | DUF3168 domain-containing protein | - |
| CU118_RS04770 () | 986482..986883 | - | 402 | WP_000110023.1 | hypothetical protein | - |
| CU118_RS04775 () | 986880..987212 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| CU118_RS04780 () | 987224..987502 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| CU118_RS04785 () | 987571..988734 | - | 1164 | WP_001142735.1 | phage major capsid protein | - |
| CU118_RS04790 () | 988746..989519 | - | 774 | WP_000061866.1 | Clp protease ClpP | - |
| CU118_RS04795 () | 989503..990741 | - | 1239 | WP_001100665.1 | phage portal protein | - |
| CU118_RS04800 () | 990746..992437 | - | 1692 | WP_050974185.1 | terminase large subunit | - |
| CU118_RS04805 () | 992427..992732 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| CU118_RS04810 () | 992859..993173 | - | 315 | WP_000160686.1 | HNH endonuclease | - |
| CU118_RS04815 () | 993330..993767 | - | 438 | WP_000528512.1 | transcriptional regulator | - |
| CU118_RS04820 () | 993780..995147 | - | 1368 | WP_001793488.1 | DEAD/DEAH box helicase | - |
| CU118_RS04825 () | 995128..995418 | - | 291 | WP_001548892.1 | VRR-NUC domain-containing protein | - |
| CU118_RS04830 () | 995552..995650 | + | 99 | WP_100793814.1 | hypothetical protein | - |
| CU118_RS04835 () | 995759..998206 | - | 2448 | WP_054189542.1 | virulence-associated E family protein | - |
| CU118_RS04840 () | 998258..998458 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| CU118_RS04845 () | 998526..998678 | - | 153 | WP_000237866.1 | transcriptional activator RinB | - |
| CU118_RS04850 () | 998681..998881 | - | 201 | WP_001125015.1 | hypothetical protein | - |
| CU118_RS04855 () | 998856..999044 | - | 189 | WP_000195789.1 | DUF1381 domain-containing protein | - |
| CU118_RS04860 () | 999061..999234 | - | 174 | WP_001209219.1 | hypothetical protein | - |
| CU118_RS04865 () | 999271..999798 | - | 528 | WP_054189541.1 | dUTP pyrophosphatase | - |
| CU118_RS04870 () | 999791..1000033 | - | 243 | WP_000700108.1 | hypothetical protein | - |
| CU118_RS04875 () | 1000023..1000259 | - | 237 | WP_000370296.1 | DUF1024 family protein | - |
| CU118_RS14240 () | 1000252..1000419 | - | 168 | WP_001813803.1 | hypothetical protein | - |
| CU118_RS04880 () | 1000431..1000679 | - | 249 | WP_000178883.1 | phi PVL orf 51-like protein | - |
| CU118_RS04885 () | 1000688..1000888 | - | 201 | WP_000235381.1 | hypothetical protein | - |
| CU118_RS04890 () | 1000891..1001148 | - | 258 | WP_000111488.1 | DUF3310 domain-containing protein | - |
| CU118_RS04895 () | 1001148..1001549 | - | 402 | WP_000113981.1 | PVL family protein | - |
| CU118_RS04900 () | 1001549..1001734 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| CU118_RS04905 () | 1001747..1003699 | - | 1953 | WP_001796208.1 | DNA polymerase | - |
| CU118_RS04910 () | 1003768..1004325 | - | 558 | WP_000645042.1 | DUF2815 family protein | - |
| CU118_RS04915 () | 1004351..1005517 | - | 1167 | WP_000762547.1 | DUF2800 domain-containing protein | - |
| CU118_RS04920 () | 1005514..1005876 | - | 363 | WP_000985984.1 | hypothetical protein | - |
| CU118_RS04925 () | 1005891..1006214 | - | 324 | WP_000175001.1 | hypothetical protein | - |
| CU118_RS04930 () | 1006293..1006454 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| CU118_RS04935 () | 1006467..1006730 | - | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| CU118_RS04940 () | 1006755..1006970 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| CU118_RS04945 () | 1007025..1007390 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| CU118_RS04950 () | 1007359..1007604 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| CU118_RS04955 () | 1007660..1007869 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| CU118_RS04960 () | 1007859..1008002 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| CU118_RS04965 () | 1008031..1008807 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| CU118_RS04970 () | 1008821..1009057 | - | 237 | WP_001121027.1 | helix-turn-helix domain-containing protein | - |
| CU118_RS04975 () | 1009209..1009523 | + | 315 | WP_000333630.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| CU118_RS04980 () | 1009536..1009997 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| CU118_RS04985 () | 1010015..1010449 | + | 435 | WP_000755718.1 | hypothetical protein | - |
| CU118_RS04990 () | 1010478..1010873 | + | 396 | WP_000449655.1 | hypothetical protein | - |
| CU118_RS04995 () | 1010963..1011109 | + | 147 | WP_001795334.1 | hypothetical protein | - |
| CU118_RS05000 () | 1011106..1011720 | - | 615 | WP_000191466.1 | hypothetical protein | - |
| CU118_RS05005 () | 1011846..1013051 | + | 1206 | WP_100793815.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| CU118_RS05010 () | 1013094..1015121 | - | 2028 | WP_054189540.1 | hypothetical protein | - |
| CU118_RS05015 () | 1015133..1016041 | - | 909 | WP_061745606.1 | DUF1672 domain-containing protein | - |
| CU118_RS05020 () | 1016293..1018044 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| CU118_RS05025 () | 1018025..1018750 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| CU118_RS05030 () | 1018883..1019620 | - | 738 | WP_054190645.1 | rRNA pseudouridine synthase | - |
| CU118_RS05035 () | 1019613..1020155 | - | 543 | WP_054190644.1 | SMC-Scp complex subunit ScpB | - |
| CU118_RS05040 () | 1020148..1020879 | - | 732 | WP_054190643.1 | segregation/condensation protein A | - |
| CU118_RS05045 () | 1020971..1021477 | + | 507 | WP_001183425.1 | DUF309 domain-containing protein | - |
| CU118_RS05050 () | 1021555..1022442 | - | 888 | WP_054190642.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| CU118_RS05055 () | 1022491..1022940 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| CU118_RS05060 () | 1023045..1023587 | - | 543 | WP_000365245.1 | NUDIX hydrolase | - |
| CU118_RS05065 () | 1023669..1024577 | + | 909 | WP_054190641.1 | aldo/keto reductase | - |
| CU118_RS05070 () | 1024790..1025038 | - | 249 | WP_054190640.1 | hypothetical protein | - |
| CU118_RS05075 () | 1025054..1025809 | - | 756 | WP_054190639.1 | SDR family oxidoreductase | - |
| CU118_RS05080 () | 1025959..1026774 | + | 816 | WP_000779748.1 | pyrroline-5-carboxylate reductase | - |
| CU118_RS05085 () | 1026877..1027797 | - | 921 | WP_054190638.1 | ribonuclease Z | - |
| CU118_RS05090 () | 1028110..1029594 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| CU118_RS05095 () | 1029824..1030690 | + | 867 | WP_171973427.1 | AraC family transcriptional regulator | - |
| CU118_RS05100 () | 1030773..1032422 | - | 1650 | WP_054190636.1 | alpha-glucosidase | - |
| CU118_RS05105 () | 1032438..1033457 | - | 1020 | WP_054190635.1 | LacI family DNA-binding transcriptional regulator | - |
| CU118_RS14245 () | 1033458..1033698 | - | 241 | Protein_977 | hypothetical protein | - |
| CU118_RS05110 () | 1033637..1034008 | - | 372 | WP_054190634.1 | VOC family protein | - |
| CU118_RS05115 () | 1034227..1035633 | - | 1407 | WP_054190004.1 | NADP-dependent phosphogluconate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|