MGE detailed information
MGE type: Conjugative plasmid MGE length: 86835 bp
Accession: NZ_CP024975 Location: 1..86835 Organism: Escherichia coli strain CV839-15 Replicon: plasmid pCV839-15-p1
Accession: NZ_CP024975 Location: 1..86835 Organism: Escherichia coli strain CV839-15 Replicon: plasmid pCV839-15-p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CV83915_RS00005 () | 4..153 | - | 150 | Protein_0 | transposase | - |
| CV83915_RS00010 () | 660..878 | + | 219 | WP_001353651.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| CV83915_RS00030 () | 2462..2854 | - | 393 | Protein_3 | IS21 family transposase IS21 | Transposase |
| CV83915_RS00035 () | 2854..4026 | - | 1173 | WP_015056461.1 | IS21 family transposase IS21 | Transposase |
| CV83915_RS00040 () | 4293..4562 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| CV83915_RS00045 () | 4559..4840 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CV83915_RS00050 () | 5149..6291 | + | 1143 | WP_158649904.1 | hypothetical protein | - |
| CV83915_RS00065 () | 8784..9179 | - | 396 | WP_000445930.1 | plasmid partitioning/stability family protein | - |
| CV83915_RS00070 () | 9179..10138 | - | 960 | WP_000921958.1 | plasmid segregation protein ParM | - |
| CV83915_RS00080 () | 10577..11479 | + | 903 | WP_064226247.1 | DUF1281 domain-containing protein | - |
| CV83915_RS00085 () | 11476..11787 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| CV83915_RS00090 () | 11863..12546 | + | 684 | WP_015056465.1 | DNA methylase | - |
| CV83915_RS00095 () | 12547..12768 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| CV83915_RS00100 () | 12782..13216 | + | 435 | WP_000274455.1 | DUF1380 family protein | - |
| CV83915_RS29270 () | 13267..14043 | + | 777 | WP_199773207.1 | hypothetical protein | - |
| CV83915_RS00115 () | 14579..14881 | + | 303 | WP_075207376.1 | antirestriction protein | - |
| CV83915_RS00120 () | 14928..15350 | + | 423 | WP_001613000.1 | DUF1380 family protein | - |
| CV83915_RS00125 () | 15347..15538 | + | 192 | WP_042634741.1 | hypothetical protein | - |
| CV83915_RS29275 () | 15517..16050 | - | 534 | Protein_20 | hypothetical protein | - |
| CV83915_RS00140 () | 16567..16797 | + | 231 | WP_001537563.1 | hypothetical protein | - |
| CV83915_RS00145 () | 16849..18210 | + | 1362 | WP_063079172.1 | DUF3560 domain-containing protein | - |
| CV83915_RS00150 () | 18258..18821 | + | 564 | WP_042634411.1 | class I SAM-dependent methyltransferase | - |
| CV83915_RS29280 () | 18802..19170 | - | 369 | WP_024236956.1 | hypothetical protein | - |
| CV83915_RS00170 () | 19653..20183 | + | 531 | WP_032214168.1 | single-stranded DNA-binding protein | - |
| CV83915_RS00175 () | 20239..20472 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| CV83915_RS00180 () | 20536..22494 | + | 1959 | WP_063078168.1 | ParB/RepB/Spo0J family partition protein | - |
| CV83915_RS00185 () | 22549..22983 | + | 435 | WP_042634413.1 | conjugation system SOS inhibitor PsiB | - |
| CV83915_RS00190 () | 22980..23699 | + | 720 | WP_001276215.1 | plasmid SOS inhibition protein A | - |
| - () | 23711..23928 | + | 218 | NuclAT_0 | - | - |
| - () | 23711..23928 | + | 218 | NuclAT_0 | - | - |
| - () | 23711..23928 | + | 218 | NuclAT_0 | - | - |
| - () | 23711..23928 | + | 218 | NuclAT_0 | - | - |
| CV83915_RS00195 () | 23974..24135 | + | 162 | WP_000775237.1 | type I toxin-antitoxin system Hok family toxin | - |
| CV83915_RS29285 () | 24373..24732 | - | 360 | Protein_31 | hypothetical protein | - |
| CV83915_RS00210 () | 24956..25252 | + | 297 | WP_001272240.1 | hypothetical protein | - |
| CV83915_RS00215 () | 25358..26179 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| CV83915_RS00220 () | 26476..27123 | - | 648 | WP_000601040.1 | hypothetical protein | VF |
| CV83915_RS00225 () | 27399..27782 | + | 384 | WP_001151530.1 | relaxosome protein TraM | - |
| CV83915_RS00230 () | 27974..28621 | + | 648 | WP_000338012.1 | transcriptional regulator TraJ family protein | - |
| CV83915_RS00235 () | 28729..28968 | + | 240 | WP_042357785.1 | conjugal transfer relaxosome protein TraY | - |
| CV83915_RS00240 () | 29002..29364 | + | 363 | WP_033566647.1 | type IV conjugative transfer system pilin TraA | - |
| CV83915_RS00245 () | 29369..29680 | + | 312 | WP_000012101.1 | type IV conjugative transfer system protein TraL | - |
| CV83915_RS00250 () | 29702..30268 | + | 567 | WP_000399793.1 | type IV conjugative transfer system protein TraE | - |
| CV83915_RS00255 () | 30279..30983 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| CV83915_RS00260 () | 30983..32410 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| CV83915_RS00265 () | 32400..32972 | + | 573 | WP_024179131.1 | conjugal transfer protein TraP | - |
| CV83915_RS00270 () | 32969..33286 | + | 318 | WP_063079180.1 | conjugal transfer protein TrbD | - |
| CV83915_RS00275 () | 33283..33534 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| CV83915_RS00280 () | 33531..34046 | + | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CV83915_RS00285 () | 34181..34402 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| CV83915_RS00290 () | 34562..37189 | + | 2628 | WP_001064243.1 | type IV secretion system protein TraC | - |
| CV83915_RS00295 () | 37186..37572 | + | 387 | WP_000214096.1 | type-F conjugative transfer system protein TrbI | - |
| CV83915_RS00300 () | 37569..38201 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| CV83915_RS00305 () | 38198..39190 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| CV83915_RS00310 () | 39216..39677 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| CV83915_RS00315 () | 39707..40159 | + | 453 | WP_000069427.1 | hypothetical protein | - |
| CV83915_RS00320 () | 40187..40825 | + | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CV83915_RS00325 () | 40822..42630 | + | 1809 | WP_063078212.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CV83915_RS00330 () | 42657..42917 | + | 261 | WP_000864323.1 | conjugal transfer protein TrbE | - |
| CV83915_RS00335 () | 42910..43653 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CV83915_RS00340 () | 43669..44016 | + | 348 | WP_001287893.1 | conjugal transfer protein TrbA | - |
| CV83915_RS00345 () | 44135..44419 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CV83915_RS00350 () | 44406..44951 | + | 546 | WP_000059818.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CV83915_RS00355 () | 44881..45255 | + | 375 | WP_071776752.1 | P-type conjugative transfer protein TrbJ | - |
| CV83915_RS00360 () | 45209..45601 | + | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| CV83915_RS00365 () | 45588..46961 | + | 1374 | WP_000944325.1 | conjugal transfer protein TraH | - |
| CV83915_RS00370 () | 46958..49780 | + | 2823 | WP_062873754.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CV83915_RS00375 () | 49795..50298 | + | 504 | WP_000605510.1 | hypothetical protein | - |
| CV83915_RS00380 () | 50330..51061 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| CV83915_RS00385 () | 51264..52001 | + | 738 | WP_000199900.1 | hypothetical protein | - |
| CV83915_RS00390 () | 52052..54403 | + | 2352 | WP_103758505.1 | Coupling protein TraD | VF |
| CV83915_RS00395 () | 54403..59673 | + | 5271 | WP_103758506.1 | Multifunctional conjugation protein TraI | Relaxase |
| CV83915_RS00400 () | 59693..60439 | + | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| CV83915_RS00405 () | 60494..61054 | + | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| CV83915_RS00410 () | 61185..61385 | + | 201 | WP_015059022.1 | hypothetical protein | - |
| CV83915_RS00415 () | 61771..62370 | + | 600 | WP_032083981.1 | hypothetical protein | - |
| CV83915_RS00420 () | 62534..62764 | + | 231 | WP_001736714.1 | hypothetical protein | - |
| CV83915_RS00425 () | 63029..63283 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| CV83915_RS00435 () | 63519..63593 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| CV83915_RS00440 () | 63586..64443 | + | 858 | WP_000130986.1 | incFII family plasmid replication initiator RepA | - |
| CV83915_RS00450 () | 65440..66477 | + | 1038 | WP_032083970.1 | DNA-binding protein | - |
| CV83915_RS00455 () | 66653..66922 | + | 270 | WP_000079937.1 | hypothetical protein | Antitoxin Detail |
| CV83915_RS00460 () | 66919..67200 | + | 282 | WP_000970003.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CV83915_RS00465 () | 67509..68651 | + | 1143 | WP_158649904.1 | hypothetical protein | - |
| CV83915_RS00470 () | 68740..69045 | + | 306 | WP_000482654.1 | hypothetical protein | VF |
| CV83915_RS00485 () | 70335..74425 | + | 4091 | Protein_84 | Serine protease SepA autotransporter | VF |
| CV83915_RS00490 () | 74495..74851 | - | 357 | Protein_85 | IS66 family transposase IS682 | Transposase |
| CV83915_RS00495 () | 74878..76449 | - | 1572 | WP_000381442.1 | IS66 family transposase IS679 | Transposase |
| CV83915_RS00500 () | 76469..76816 | - | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| CV83915_RS00505 () | 76816..77466 | - | 651 | WP_000993956.1 | IS66 family transposase IS679 | Transposase |
| CV83915_RS00510 () | 77540..77872 | - | 333 | Protein_89 | transposase | - |
| CV83915_RS00515 () | 77957..78979 | + | 1023 | WP_001297099.1 | IS21 family transposase IS100kyp | Transposase |
| CV83915_RS00520 () | 78976..79758 | + | 783 | WP_096911776.1 | IS21 family transposase IS100kyp | Transposase |
| CV83915_RS00525 () | 79826..80786 | - | 961 | Protein_92 | IS3 family transposase | - |
| CV83915_RS00530 () | 81174..81389 | - | 216 | WP_015056453.1 | heat-stable enterotoxin ST-II | - |
| CV83915_RS00540 () | 81595..82292 | + | 698 | Protein_94 | IS1 family transposase IS1R | Transposase |
| CV83915_RS00545 () | 82429..82890 | + | 462 | Protein_95 | AAA family ATPase | - |
| CV83915_RS00555 () | 84278..84529 | - | 252 | Protein_97 | hypothetical protein | - |
| CV83915_RS00565 () | 84717..85904 | - | 1188 | WP_042634447.1 | IS91 family transposase ISEc37 | Transposase |
| CV83915_RS00570 () | 85904..86200 | - | 297 | WP_059225599.1 | hypothetical protein | - |
| CV83915_RS00575 () | 86303..86695 | - | 393 | Protein_100 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|