MGE detailed information
MGE type: Prophage MGE length: 88705 bp
Accession: NZ_CP024901 Location: 4007641..4096345 Organism: Photorhabdus laumondii subsp. laumondii strain TT01 Replicon: chromosome
Accession: NZ_CP024901 Location: 4007641..4096345 Organism: Photorhabdus laumondii subsp. laumondii strain TT01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PluTT01m_RS17415 () | 4004238..4004585 | + | 348 | WP_011147559.1 | outer membrane protein assembly factor BamE | - |
| PluTT01m_RS17420 () | 4004641..4004934 | - | 294 | WP_011147560.1 | RnfH family protein | - |
| PluTT01m_RS17425 () | 4004927..4005361 | - | 435 | WP_011147561.1 | type II toxin-antitoxin system RatA family toxin | - |
| PluTT01m_RS17430 () | 4005518..4006000 | + | 483 | WP_011147562.1 | SsrA-binding protein SmpB | - |
| PluTT01m_RS17440 () | 4006917..4007066 | + | 150 | WP_071824172.1 | helix-turn-helix transcriptional regulator | - |
| PluTT01m_RS17445 () | 4007209..4007493 | + | 285 | WP_011147564.1 | type I toxin-antitoxin system SymE family toxin | - |
| PluTT01m_RS17450 () | 4007641..4008087 | - | 447 | WP_011147565.1 | tail fiber assembly protein | - |
| PluTT01m_RS17455 () | 4008088..4009200 | - | 1113 | WP_082302866.1 | phage tail protein | - |
| PluTT01m_RS17460 () | 4009418..4010023 | - | 606 | WP_011147567.1 | DUF2612 domain-containing protein | - |
| PluTT01m_RS17465 () | 4010024..4011265 | - | 1242 | WP_041380244.1 | baseplate J/gp47 family protein | - |
| PluTT01m_RS17470 () | 4011265..4011621 | - | 357 | WP_011147569.1 | hypothetical protein | - |
| PluTT01m_RS26975 () | 4011720..4011893 | - | 174 | WP_011147570.1 | hypothetical protein | - |
| PluTT01m_RS17475 () | 4012050..4012583 | - | 534 | WP_011147571.1 | hypothetical protein | - |
| PluTT01m_RS17480 () | 4013047..4013646 | - | 600 | WP_109791732.1 | oxidoreductase | - |
| PluTT01m_RS17485 () | 4013606..4014502 | - | 897 | WP_011147573.1 | hypothetical protein | - |
| PluTT01m_RS17490 () | 4014499..4014804 | - | 306 | WP_011147574.1 | hypothetical protein | - |
| PluTT01m_RS17495 () | 4014801..4015622 | - | 822 | WP_011147575.1 | hypothetical protein | - |
| PluTT01m_RS17500 () | 4015622..4017739 | - | 2118 | WP_041380246.1 | lytic transglycosylase domain-containing protein | - |
| PluTT01m_RS17510 () | 4017948..4018355 | - | 408 | WP_011147577.1 | hypothetical protein | - |
| PluTT01m_RS17515 () | 4018355..4018792 | - | 438 | WP_011147578.1 | hypothetical protein | - |
| PluTT01m_RS17520 () | 4018792..4020279 | - | 1488 | WP_011147579.1 | DUF3383 domain-containing protein | - |
| PluTT01m_RS17525 () | 4020260..4020691 | - | 432 | WP_173362531.1 | hypothetical protein | - |
| PluTT01m_RS17530 () | 4020802..4021173 | - | 372 | WP_011147581.1 | hypothetical protein | - |
| PluTT01m_RS17535 () | 4021170..4021628 | - | 459 | WP_011147582.1 | hypothetical protein | - |
| PluTT01m_RS17540 () | 4021628..4022077 | - | 450 | WP_011147583.1 | DUF4054 domain-containing protein | - |
| PluTT01m_RS17545 () | 4022082..4022408 | - | 327 | WP_011147584.1 | hypothetical protein | - |
| PluTT01m_RS17550 () | 4022409..4023443 | - | 1035 | WP_011147585.1 | DUF2184 domain-containing protein | - |
| PluTT01m_RS17555 () | 4023443..4023919 | - | 477 | WP_011147586.1 | hypothetical protein | - |
| PluTT01m_RS17560 () | 4023922..4025247 | - | 1326 | WP_011147587.1 | DUF2213 domain-containing protein | - |
| PluTT01m_RS17565 () | 4025265..4025957 | - | 693 | WP_040149365.1 | head morphogenesis protein | - |
| PluTT01m_RS17570 () | 4026043..4027467 | - | 1425 | WP_109791985.1 | DUF1073 domain-containing protein | - |
| PluTT01m_RS17575 () | 4027526..4028731 | - | 1206 | WP_071824128.1 | PBSX family phage terminase large subunit | - |
| PluTT01m_RS17580 () | 4028791..4029510 | - | 720 | WP_011147591.1 | terminase small subunit | - |
| PluTT01m_RS17585 () | 4029589..4029906 | - | 318 | WP_011147592.1 | hypothetical protein | - |
| PluTT01m_RS17590 () | 4030019..4030857 | + | 839 | Protein_3354 | IS5 family transposase ISPlu7 | Transposase |
| PluTT01m_RS17595 () | 4031300..4032199 | - | 900 | WP_011147593.1 | DUF4868 domain-containing protein | - |
| PluTT01m_RS17600 () | 4032219..4032737 | - | 519 | WP_011147594.1 | hypothetical protein | - |
| PluTT01m_RS17605 () | 4032868..4033317 | - | 450 | WP_011147595.1 | lysis protein | - |
| PluTT01m_RS17610 () | 4033410..4033946 | - | 537 | WP_011147596.1 | lysozyme | - |
| PluTT01m_RS17615 () | 4033930..4034112 | - | 183 | WP_011147597.1 | phage holin family protein | - |
| PluTT01m_RS17620 () | 4034273..4034674 | + | 402 | WP_011147598.1 | hypothetical protein | - |
| PluTT01m_RS17625 () | 4034718..4035290 | - | 573 | Protein_3361 | site-specific DNA-methyltransferase | - |
| PluTT01m_RS17630 () | 4036091..4036339 | - | 249 | WP_011147600.1 | helix-turn-helix domain-containing protein | - |
| PluTT01m_RS17635 () | 4036428..4036682 | - | 255 | WP_041380249.1 | helix-turn-helix domain-containing protein | - |
| PluTT01m_RS17640 () | 4036787..4037044 | + | 258 | WP_011147602.1 | helix-turn-helix domain-containing protein | - |
| PluTT01m_RS17645 () | 4037145..4037597 | - | 453 | WP_011147603.1 | tail fiber assembly protein | - |
| PluTT01m_RS17650 () | 4038273..4038575 | - | 303 | Protein_3366 | phage tail protein | - |
| PluTT01m_RS17655 () | 4038577..4039155 | - | 579 | WP_109791986.1 | phage tail protein I | - |
| PluTT01m_RS17660 () | 4039145..4040248 | - | 1104 | WP_011147606.1 | baseplate J/gp47 family protein | - |
| PluTT01m_RS17665 () | 4040239..4040592 | - | 354 | WP_041380251.1 | GPW/gp25 family protein | - |
| PluTT01m_RS17670 () | 4040639..4041244 | - | 606 | WP_011147608.1 | phage baseplate assembly protein V | - |
| PluTT01m_RS17675 () | 4041241..4042419 | - | 1179 | WP_011147609.1 | phage late control D family protein | - |
| PluTT01m_RS17680 () | 4042407..4042619 | - | 213 | WP_036777198.1 | tail protein X | - |
| PluTT01m_RS17685 () | 4042622..4043506 | - | 885 | WP_011147610.1 | phage tail protein | - |
| PluTT01m_RS17690 () | 4043506..4046058 | - | 2553 | WP_011147611.1 | phage tail tape measure protein | - |
| PluTT01m_RS27265 () | 4046062..4046271 | - | 210 | WP_109791733.1 | GpE family phage tail protein | - |
| PluTT01m_RS17700 () | 4046204..4046467 | - | 264 | Protein_3376 | phage tail assembly protein | - |
| PluTT01m_RS17710 () | 4046725..4047249 | - | 525 | WP_011147613.1 | phage major tail tube protein | - |
| PluTT01m_RS17715 () | 4047249..4048676 | - | 1428 | WP_011147614.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| PluTT01m_RS17720 () | 4048666..4048878 | - | 213 | WP_011147615.1 | hypothetical protein | - |
| PluTT01m_RS17725 () | 4048875..4049342 | - | 468 | WP_011147616.1 | Gp37 family protein | - |
| PluTT01m_RS17730 () | 4049342..4049779 | - | 438 | WP_041380252.1 | DUF1320 domain-containing protein | - |
| PluTT01m_RS17735 () | 4049781..4050131 | - | 351 | WP_011147618.1 | DUF2190 family protein | - |
| PluTT01m_RS17740 () | 4050145..4051080 | - | 936 | WP_011147619.1 | hypothetical protein | - |
| PluTT01m_RS17745 () | 4051112..4052206 | - | 1095 | WP_011147620.1 | hypothetical protein | - |
| PluTT01m_RS17750 () | 4052411..4052860 | - | 450 | WP_011147621.1 | phage virion morphogenesis protein | - |
| PluTT01m_RS17755 () | 4052853..4053683 | - | 831 | WP_041380253.1 | minor capsid protein | - |
| PluTT01m_RS17760 () | 4053664..4055157 | - | 1494 | WP_011147623.1 | DUF935 domain-containing protein | - |
| PluTT01m_RS17765 () | 4055157..4056680 | - | 1524 | WP_011147624.1 | hypothetical protein | - |
| PluTT01m_RS17770 () | 4056677..4057222 | - | 546 | WP_011147625.1 | DUF3486 family protein | - |
| PluTT01m_RS17775 () | 4057222..4057533 | - | 312 | WP_011147626.1 | hypothetical protein | - |
| PluTT01m_RS17780 () | 4057526..4057858 | - | 333 | WP_011147627.1 | hypothetical protein | - |
| PluTT01m_RS17785 () | 4057855..4058478 | - | 624 | WP_011147628.1 | hypothetical protein | - |
| PluTT01m_RS17790 () | 4058468..4059085 | - | 618 | WP_011147629.1 | transglycosylase SLT domain-containing protein | - |
| PluTT01m_RS17795 () | 4059088..4059438 | - | 351 | WP_011147630.1 | putative holin | - |
| PluTT01m_RS17800 () | 4059689..4060459 | + | 771 | WP_011147631.1 | DNA adenine methylase | - |
| PluTT01m_RS17805 () | 4060507..4060944 | - | 438 | WP_011147632.1 | hypothetical protein | - |
| PluTT01m_RS17810 () | 4060962..4061327 | - | 366 | WP_125043781.1 | hypothetical protein | - |
| PluTT01m_RS17815 () | 4061428..4061772 | - | 345 | WP_041380254.1 | prepilin peptidase | - |
| PluTT01m_RS17820 () | 4061808..4062242 | - | 435 | Protein_3399 | helix-turn-helix transcriptional regulator | - |
| PluTT01m_RS17825 () | 4062292..4062477 | + | 186 | WP_041380255.1 | DNA-binding protein | - |
| PluTT01m_RS17830 () | 4062533..4062841 | + | 309 | WP_011147637.1 | helix-turn-helix domain-containing protein | - |
| PluTT01m_RS27155 () | 4062861..4063817 | + | 957 | WP_041380256.1 | hypothetical protein | - |
| PluTT01m_RS17845 () | 4063871..4065655 | + | 1785 | WP_011147639.1 | hypothetical protein ; Integrase | Integrase |
| PluTT01m_RS17850 () | 4065894..4067066 | + | 1173 | WP_011147640.1 | AAA family ATPase | - |
| PluTT01m_RS17855 () | 4067525..4067716 | + | 192 | WP_011147641.1 | hypothetical protein | - |
| PluTT01m_RS17860 () | 4067815..4068254 | + | 440 | Protein_3406 | regulatory protein GemA | - |
| PluTT01m_RS17865 () | 4068238..4068606 | + | 369 | WP_011147643.1 | DNA-binding protein | - |
| PluTT01m_RS17870 () | 4068788..4069255 | - | 468 | Protein_3408 | site-specific DNA-methyltransferase | - |
| PluTT01m_RS17875 () | 4069356..4069556 | - | 201 | WP_011147645.1 | hypothetical protein | - |
| PluTT01m_RS17880 () | 4069736..4070251 | - | 516 | Protein_3410 | antiterminator | - |
| PluTT01m_RS17885 () | 4070239..4070536 | - | 298 | Protein_3411 | hypothetical protein | - |
| PluTT01m_RS17890 () | 4070552..4071145 | - | 594 | WP_011147649.1 | DUF1367 family protein | - |
| PluTT01m_RS17895 () | 4071246..4072445 | - | 1200 | WP_011147650.1 | XRE family transcriptional regulator | - |
| PluTT01m_RS17900 () | 4072461..4073131 | - | 671 | Protein_3414 | hypothetical protein | - |
| PluTT01m_RS17905 () | 4073558..4074925 | - | 1368 | WP_011147652.1 | replicative DNA helicase | - |
| PluTT01m_RS17910 () | 4074927..4075511 | - | 585 | WP_011147653.1 | ATP-binding protein | - |
| PluTT01m_RS17915 () | 4075520..4076272 | - | 753 | WP_011147654.1 | helix-turn-helix domain-containing protein | - |
| PluTT01m_RS17920 () | 4076275..4076499 | - | 225 | WP_011147655.1 | hypothetical protein | - |
| PluTT01m_RS17925 () | 4076514..4076963 | - | 450 | WP_011147656.1 | hypothetical protein | - |
| PluTT01m_RS17930 () | 4077021..4077248 | - | 228 | WP_041380257.1 | helix-turn-helix domain-containing protein | - |
| PluTT01m_RS27270 () | 4077389..4077568 | + | 180 | Protein_3421 | hypothetical protein | - |
| PluTT01m_RS17940 () | 4078786..4079130 | + | 345 | WP_011147660.1 | hypothetical protein | - |
| PluTT01m_RS17945 () | 4079306..4080331 | + | 1026 | WP_011144720.1 | IS630 family transposase ISPlu19 | Transposase |
| PluTT01m_RS17950 () | 4080510..4082270 | + | 1761 | WP_011147662.1 | hypothetical protein | - |
| PluTT01m_RS17955 () | 4082267..4082764 | + | 498 | WP_011147663.1 | siphovirus Gp157 family protein | - |
| PluTT01m_RS17960 () | 4082816..4083004 | + | 189 | WP_011147664.1 | hypothetical protein | - |
| PluTT01m_RS27160 () | 4083574..4083744 | + | 171 | WP_011147665.1 | hypothetical protein | - |
| PluTT01m_RS17965 () | 4083749..4083964 | + | 216 | WP_011147666.1 | hypothetical protein | - |
| PluTT01m_RS17970 () | 4083916..4085099 | + | 1184 | Protein_3429 | Putative defective protein IntQ ; Integrase | Integrase |
| PluTT01m_RS26980 () | 4085545..4085760 | - | 216 | WP_049789790.1 | hypothetical protein | - |
| PluTT01m_RS17980 () | 4085824..4086054 | + | 231 | WP_011147669.1 | hypothetical protein | - |
| PluTT01m_RS17985 () | 4086051..4086320 | + | 270 | WP_011147670.1 | helix-turn-helix domain-containing protein | - |
| PluTT01m_RS17990 () | 4086668..4087078 | - | 411 | WP_036808644.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PluTT01m_RS17995 () | 4087132..4087305 | - | 174 | WP_011147672.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PluTT01m_RS18000 () | 4087425..4089073 | - | 1649 | Protein_3435 | hypothetical protein | - |
| PluTT01m_RS18005 () | 4089073..4089609 | - | 537 | WP_041380260.1 | hypothetical protein | - |
| PluTT01m_RS18010 () | 4089581..4090189 | - | 609 | WP_011147676.1 | hypothetical protein | - |
| PluTT01m_RS18015 () | 4090309..4090928 | - | 620 | Protein_3438 | tail fiber assembly protein | - |
| PluTT01m_RS18020 () | 4090928..4092715 | - | 1788 | WP_109791737.1 | phage tail protein | - |
| PluTT01m_RS18025 () | 4093008..4093413 | - | 406 | Protein_3440 | IS607 family transposase ISLhe9 | Transposase |
| PluTT01m_RS18030 () | 4093488..4093857 | + | 370 | Protein_3441 | DUF2938 family protein | - |
| PluTT01m_RS18035 () | 4094446..4094733 | - | 288 | WP_011147682.1 | hypothetical protein | - |
| PluTT01m_RS18040 () | 4095761..4096345 | - | 585 | WP_011147683.1 | putative adenosine monophosphate-protein transferase fic | VF |
| PluTT01m_RS18045 () | 4096353..4096835 | - | 483 | WP_011147684.1 | hypothetical protein | - |
| PluTT01m_RS18050 () | 4096915..4097445 | - | 531 | WP_011147685.1 | GNAT family N-acetyltransferase | - |
| PluTT01m_RS18055 () | 4097655..4098314 | - | 660 | WP_011147686.1 | polymer-forming cytoskeletal protein | - |
| PluTT01m_RS18060 () | 4099061..4099465 | - | 405 | WP_011147687.1 | hypothetical protein | - |
| PluTT01m_RS18065 () | 4100126..4100401 | + | 276 | WP_011147688.1 | hypothetical protein | - |
| PluTT01m_RS18070 () | 4100609..4101064 | + | 456 | WP_011147689.1 | GNAT family N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Photorhabdus luminescens subsp. laumondii TTO1 | Prophage | TA21013 | NC_005126 | 4007219..4096355 | 0 |