MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 52137 bp
Accession: NZ_CP024901 Location: 2130713..2182849 Organism: Photorhabdus laumondii subsp. laumondii strain TT01 Replicon: chromosome
Accession: NZ_CP024901 Location: 2130713..2182849 Organism: Photorhabdus laumondii subsp. laumondii strain TT01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PluTT01m_RS09235 () | 2126140..2126553 | + | 414 | WP_011146059.1 | CoA-binding protein | - |
| PluTT01m_RS09240 () | 2128484..2128804 | - | 321 | WP_011146062.1 | heat shock protein HspQ | - |
| PluTT01m_RS09245 () | 2129028..2129306 | + | 279 | WP_011146063.1 | acylphosphatase | - |
| PluTT01m_RS09250 () | 2129320..2129649 | - | 330 | WP_041380794.1 | sulfurtransferase TusE | - |
| PluTT01m_RS09260 () | 2129982..2130221 | + | 240 | WP_125043751.1 | hypothetical protein | - |
| PluTT01m_RS09265 () | 2131019..2132044 | + | 1026 | WP_011146066.1 | IS630 family transposase ISPlu3 | Transposase |
| PluTT01m_RS09270 () | 2132248..2132787 | + | 540 | WP_011146067.1 | hypothetical protein | - |
| PluTT01m_RS09275 () | 2133558..2133692 | + | 135 | Protein_1756 | subtype I-F CRISPR-associated endonuclease Cas1 | - |
| PluTT01m_RS09280 () | 2133689..2136970 | + | 3282 | WP_011146068.1 | type I-F CRISPR-associated helicase Cas3 | - |
| PluTT01m_RS09285 () | 2137064..2137324 | + | 261 | WP_011146069.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| PluTT01m_RS09290 () | 2138004..2139362 | + | 1359 | WP_011146070.1 | type I-F CRISPR-associated protein Csy1 | - |
| PluTT01m_RS09295 () | 2139359..2140327 | + | 969 | WP_011146071.1 | type I-F CRISPR-associated protein Csy2 | - |
| PluTT01m_RS09300 () | 2140351..2141364 | + | 1014 | WP_011146072.1 | type I-F CRISPR-associated protein Csy3 | - |
| PluTT01m_RS09305 () | 2141374..2141928 | + | 555 | WP_011146073.1 | type I-F CRISPR-associated endoribonuclease Cas6/Csy4 | - |
| PluTT01m_RS09310 () | 2143513..2144340 | - | 828 | WP_011146076.1 | 5-deoxy-glucuronate isomerase | - |
| PluTT01m_RS09315 () | 2144388..2145278 | - | 891 | WP_011146077.1 | myo-inosose-2 dehydratase | - |
| PluTT01m_RS09320 () | 2145308..2147212 | - | 1905 | WP_011146078.1 | 5-dehydro-2-deoxygluconokinase | - |
| PluTT01m_RS09325 () | 2147288..2148421 | - | 1134 | WP_011146079.1 | Gfo/Idh/MocA family oxidoreductase | - |
| PluTT01m_RS09330 () | 2148956..2150659 | - | 1704 | WP_041380033.1 | solute:sodium symporter family transporter | - |
| PluTT01m_RS09335 () | 2150775..2151761 | - | 987 | WP_011146081.1 | inositol 2-dehydrogenase | - |
| PluTT01m_RS09340 () | 2152127..2154061 | - | 1935 | WP_198408808.1 | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | - |
| PluTT01m_RS09345 () | 2154078..2155589 | - | 1512 | WP_011146083.1 | CoA-acylating methylmalonate-semialdehyde dehydrogenase | - |
| PluTT01m_RS09350 () | 2155893..2156726 | + | 834 | WP_011146084.1 | MurR/RpiR family transcriptional regulator | - |
| PluTT01m_RS09355 () | 2156935..2157294 | + | 360 | WP_011146085.1 | hypothetical protein | - |
| PluTT01m_RS09360 () | 2157564..2157899 | + | 336 | WP_011146086.1 | tRNA-binding protein | - |
| PluTT01m_RS09365 () | 2157956..2158663 | + | 708 | WP_011146087.1 | Exoenzyme S synthesis regulatory protein ExsA | VF |
| PluTT01m_RS09370 () | 2158731..2159018 | + | 288 | WP_011146088.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PluTT01m_RS09375 () | 2159033..2159359 | + | 327 | WP_011146089.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| PluTT01m_RS09380 () | 2159567..2161105 | - | 1539 | WP_011146090.1 | peptide MFS transporter | - |
| PluTT01m_RS09385 () | 2161829..2162770 | - | 942 | WP_011146091.1 | Lipid A biosynthesis lauroyltransferase | VF |
| PluTT01m_RS09390 () | 2163057..2163293 | + | 237 | WP_011146092.1 | DinI family protein | - |
| PluTT01m_RS09395 () | 2163537..2164595 | + | 1059 | WP_011146093.1 | rhodanese-related sulfurtransferase | - |
| PluTT01m_RS09400 () | 2164641..2165243 | - | 603 | WP_011146094.1 | response regulator transcription factor | - |
| PluTT01m_RS09405 () | 2165447..2165701 | - | 255 | WP_011146095.1 | biofilm formation regulator BssS | - |
| PluTT01m_RS09410 () | 2165894..2166946 | - | 1053 | WP_011146096.1 | dihydroorotase | - |
| PluTT01m_RS09415 () | 2167337..2168221 | - | 885 | WP_011144786.1 | IS982 family transposase ISPlu6 | Transposase |
| PluTT01m_RS09420 () | 2168568..2169416 | + | 849 | WP_011146097.1 | hypothetical protein | - |
| PluTT01m_RS09425 () | 2169580..2169798 | + | 219 | WP_041380034.1 | AlpA family transcriptional regulator | - |
| PluTT01m_RS09430 () | 2169956..2170273 | + | 318 | WP_041380798.1 | hypothetical protein | - |
| PluTT01m_RS09435 () | 2170361..2170672 | + | 312 | WP_011146099.1 | hypothetical protein | - |
| PluTT01m_RS09440 () | 2170747..2171715 | - | 969 | WP_011145223.1 | IS30 family transposase ISPlu1 | Transposase |
| PluTT01m_RS09445 () | 2171837..2172133 | + | 297 | Protein_1790 | hypothetical protein | - |
| PluTT01m_RS09450 () | 2172090..2172437 | + | 348 | Protein_1791 | IS4 family transposase ISPlu9 | Transposase |
| PluTT01m_RS09455 () | 2172452..2172769 | + | 318 | Protein_1792 | hypothetical protein | - |
| PluTT01m_RS09460 () | 2172779..2173054 | + | 276 | WP_041380036.1 | membrane protein | - |
| PluTT01m_RS09465 () | 2173095..2174969 | - | 1875 | WP_011146101.1 | KAP family NTPase | - |
| PluTT01m_RS09470 () | 2175030..2176544 | - | 1515 | WP_011146102.1 | MobA/MobL family protein | - |
| PluTT01m_RS09475 () | 2177345..2177734 | + | 390 | WP_011146104.1 | hypothetical protein | - |
| PluTT01m_RS09480 () | 2177727..2178044 | + | 318 | WP_011146105.1 | conjugal transfer protein TraD | - |
| PluTT01m_RS09485 () | 2178379..2179392 | - | 1014 | WP_109791488.1 | hypothetical protein | - |
| PluTT01m_RS09490 () | 2179415..2181001 | - | 1587 | WP_125043755.1 | hypothetical protein | - |
| PluTT01m_RS09495 () | 2181727..2182812 | + | 1086 | WP_011146110.1 | DUF4297 domain-containing protein | - |
| PluTT01m_RS09500 () | 2182872..2184605 | + | 1734 | WP_011146111.1 | hypothetical protein | - |
| PluTT01m_RS09505 () | 2184689..2185952 | - | 1264 | Protein_1802 | integrase arm-type DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Photorhabdus luminescens subsp. laumondii TTO1 | Integrative and Conjugative Element | TA20999 | NC_005126 | 2130712..2182848 | 0 |