NZ_CP0248601..172588

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 172588 bp
Accession: NZ_CP024860        Location: 1..172588         Organism: Escherichia coli strain AR_0014       Replicon: plasmid unitig_1_pilon


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
AM341_RS24735 () 145..429 + 285 WP_000624105.1 type-F conjugative transfer system pilin chaperone TraQ -
AM341_RS24740 () 416..970 + 555 WP_001553830.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
AM341_RS24745 () 900..1274 + 375 WP_071788165.1 P-type conjugative transfer protein TrbJ -
AM341_RS24750 () 1228..1620 + 393 WP_000164675.1 F-type conjugal transfer protein TrbF -
AM341_RS24755 () 1607..2980 + 1374 WP_021518370.1 conjugal transfer protein TraH -
AM341_RS24760 () 2977..5802 + 2826 WP_001553826.1 conjugal transfer mating pair stabilization protein TraG -
AM341_RS24765 () 5799..6308 + 510 WP_000628100.1 conjugal transfer entry exclusion protein TraS -
AM341_RS24770 () 6322..7053 + 732 WP_000850424.1 complement resistance protein TraT -
AM341_RS24775 () 7305..9494 + 2190 WP_040110343.1 type IV conjugative transfer system coupling protein TraD -
AM341_RS24780 () 9494..14614 + 5121 WP_013362805.1 conjugative transfer relaxase/helicase TraI -
AM341_RS24785 () 14634..15380 + 747 WP_023149624.1 conjugal transfer pilus acetylase TraX -
AM341_RS24790 () 15435..15995 + 561 WP_000139363.1 fertility inhibition protein FinO -
AM341_RS24795 () 16129..16341 + 213 WP_005012601.1 hypothetical protein -
AM341_RS26655 () 16642..16731 - 90 Protein_14 IS1 family transposase -
AM341_RS24810 () 16786..17463 + 678 WP_001339397.1 IS66 family insertion sequence hypothetical protein -
AM341_RS24815 () 17463..17810 + 348 WP_000624622.1 IS66 family insertion sequence element accessory protein TnpB -
AM341_RS24820 () 17830..19401 + 1572 WP_023149734.1 IS66 family transposase -
AM341_RS24825 () 19439..20055 - 617 Protein_18 IS1 family transposase -
AM341_RS24835 () 20156..20338 + 183 WP_000968309.1 hypothetical protein -
- () 20477..20538 - 62 NuclAT_2 - Antitoxin Detail
- () 20477..20538 - 62 NuclAT_2 - Antitoxin Detail
- () 20477..20538 - 62 NuclAT_2 - Antitoxin Detail
- () 20477..20538 - 62 NuclAT_2 - Antitoxin Detail
AM341_RS24845 () 20525..20731 + 207 WP_015387399.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
AM341_RS24850 () 21015..21272 + 258 WP_000083833.1 replication regulatory protein RepA -
AM341_RS24860 () 21508..21582 + 75 WP_032336874.1 RepA leader peptide Tap -
AM341_RS24865 () 21575..22021 + 447 Protein_23 incFII family plasmid replication initiator RepA -
AM341_RS24870 () 21967..22449 - 483 Protein_24 VENN motif pre-toxin domain-containing protein -
AM341_RS24875 () 23342..24562 + 1221 WP_000410951.1 arginine deiminase -
AM341_RS24880 () 24573..25484 + 912 WP_000440183.1 carbamate kinase -
AM341_RS24885 () 25569..26573 + 1005 WP_000154545.1 ornithine carbamoyltransferase -
AM341_RS24890 () 26621..28024 + 1404 WP_000514417.1 YfcC family protein -
AM341_RS24895 () 28105..28584 + 480 WP_001496175.1 ArgR family transcriptional regulator -
AM341_RS24900 () 28648..28989 - 342 Protein_30 transposase -
AM341_RS24905 () 28941..29162 - 222 WP_000080227.1 hypothetical protein -
AM341_RS24910 () 29193..29543 - 351 WP_000624725.1 IS66 family insertion sequence element accessory protein TnpB -
AM341_RS24915 () 29540..29902 - 363 WP_059330006.1 IS66 family insertion sequence hypothetical protein -
AM341_RS24920 () 30011..30708 - 698 Protein_34 IS1 family transposase -
AM341_RS24930 () 30741..31319 + 579 WP_032152936.1 DUF2726 domain-containing protein -
AM341_RS24935 () 31732..32085 - 354 WP_000005489.1 hypothetical protein -
AM341_RS24940 () 32557..33579 - 1023 WP_000156883.1 IS110 family transposase -
AM341_RS24950 () 33984..34241 + 258 WP_000083821.1 replication regulatory protein RepA -
AM341_RS24960 () 34476..34550 + 75 WP_001365705.1 RepA leader peptide Tap -
AM341_RS24965 () 34543..35400 + 858 WP_032152935.1 incFII family plasmid replication initiator RepA -
AM341_RS24975 () 36339..36992 + 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
AM341_RS26455 () 37085..37342 + 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
AM341_RS24980 () 37275..37676 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
AM341_RS24985 () 37813..40710 - 2898 WP_001553819.1 Tn3-like element Tn5403 family transposase -
AM341_RS24990 () 40805..41410 + 606 WP_000509965.1 recombinase family protein -
AM341_RS24995 () 41434..42183 - 750 Protein_46 Tn3 family transposase -
AM341_RS25000 () 42172..42579 + 408 WP_001214976.1 cysteine hydrolase -
AM341_RS25005 () 42717..43601 + 885 WP_000058717.1 EamA family transporter -
AM341_RS25010 () 43633..44832 - 1200 WP_000804064.1 tetracycline efflux MFS transporter Tet(A) -
AM341_RS25015 () 44938..45588 + 651 WP_000164043.1 tetracycline resistance transcriptional repressor TetR(A) -
AM341_RS25020 () 45620..45862 - 243 WP_032140899.1 hypothetical protein -
AM341_RS25025 () 45904..47418 - 1515 Protein_52 Tn3-like element TnAs1 family transposase -
AM341_RS25030 () 47484..48188 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
AM341_RS25035 () 48241..48720 + 480 Protein_54 recombinase family protein -
AM341_RS25040 () 48905..49462 + 558 WP_000108589.1 OsmC family protein -
AM341_RS25045 () 49604..50185 + 582 WP_000210409.1 TetR/AcrR family transcriptional regulator -
AM341_RS25050 () 50190..50528 + 339 WP_000888080.1 carboxymuconolactone decarboxylase family protein -
AM341_RS25055 () 50558..50887 - 330 WP_002431133.1 thioredoxin family protein -
AM341_RS25060 () 51101..52207 + 1107 WP_000039982.1 alkene reductase -
AM341_RS25065 () 52273..52974 + 702 WP_001194013.1 DsbA family oxidoreductase -
AM341_RS25070 () 53040..53813 + 774 WP_032152933.1 SDR family oxidoreductase -
AM341_RS25075 () 53999..55222 - 1224 WP_000872613.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
AM341_RS25080 () 55353..56225 - 873 WP_000090196.1 DMT family transporter -
AM341_RS25085 () 56467..57219 + 753 WP_000734115.1 alpha/beta hydrolase -
AM341_RS25090 () 57246..57559 + 314 Protein_65 Tn3 family transposase -
AM341_RS25095 () 57577..58493 - 917 Protein_66 IS5 family transposase -
AM341_RS25100 () 58595..59164 + 570 WP_001336919.1 autotransporter outer membrane beta-barrel domain-containing protein -
AM341_RS25105 () 59167..59640 - 474 Protein_68 IS3 family transposase -
AM341_RS25110 () 59730..61238 - 1509 WP_001189123.1 group II intron reverse transcriptase/maturase -
AM341_RS25120 () 61911..62650 - 740 Protein_70 IS3 family transposase -
AM341_RS25125 () 62676..62981 + 306 Protein_71 IS91 family transposase -
AM341_RS25135 () 63504..64679 - 1176 WP_001020413.1 enterotoxin production-related protein TieB -
AM341_RS25140 () 64748..66682 - 1935 WP_100183790.1 TonB-dependent receptor -
AM341_RS25150 () 66755..67459 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
AM341_RS25155 () 67517..69931 + 2415 Protein_75 Tn3 family transposase -
AM341_RS25160 () 69965..70069 + 105 Protein_76 IS5/IS1182 family transposase -
AM341_RS25165 () 70219..70851 - 633 Protein_77 histidine-type phosphatase -
AM341_RS25170 () 70973..71458 - 486 WP_000874189.1 hypothetical protein -
AM341_RS25175 () 71483..71968 - 486 WP_001267176.1 TlpA family protein disulfide reductase -
AM341_RS25180 () 71955..72650 - 696 WP_000117262.1 ABC transporter ATP-binding protein -
AM341_RS25185 () 72655..73785 - 1131 WP_000729219.1 ABC transporter permease -
AM341_RS25190 () 73775..75058 - 1284 WP_000964653.1 ABC transporter permease -
AM341_RS25195 () 75061..76440 - 1380 WP_000119836.1 DUF2318 domain-containing protein -
AM341_RS25200 () 76544..77071 - 528 WP_000178050.1 iron transporter -
AM341_RS25205 () 77112..78998 - 1887 WP_000118029.1 FTR1 family iron permease -
AM341_RS25215 () 79345..80160 - 816 WP_012372823.1 Na(+)-translocating NADH-quinone reductase subunit C -
AM341_RS25220 () 80343..80849 - 507 WP_000949452.1 protein disulfide oxidoreductase -
AM341_RS25225 () 80839..80997 - 159 WP_000449408.1 DsbA family protein -
AM341_RS26805 () 81147..81260 - 114 Protein_89 IS6 family transposase -
AM341_RS25240 () 81460..82157 + 698 Protein_90 IS1 family transposase -
AM341_RS25245 () 82172..83047 + 876 Protein_91 IS4-like element ISVsa5 family transposase -
AM341_RS25250 () 83081..83785 - 705 WP_001067858.1 IS6-like element IS26 family transposase -
AM341_RS25255 () 83844..83999 + 156 WP_100183791.1 DUF4158 domain-containing protein -
AM341_RS25260 () 84181..85443 + 1263 WP_000608644.1 IS1380-like element ISEc9 family transposase -
AM341_RS25265 () 85699..86574 + 876 WP_000239590.1 class A extended-spectrum beta-lactamase CTX-M-15 -
AM341_RS25270 () 86621..86953 - 333 WP_001393253.1 WbuC family cupin fold metalloprotein -
AM341_RS25275 () 86967..89210 + 2244 Protein_97 Tn3-like element Tn3 family transposase -
AM341_RS25280 () 89275..89979 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
AM341_RS25285 () 90033..91081 - 1049 Protein_99 IS3 family transposase -
AM341_RS25290 () 91173..91715 - 543 WP_002063889.1 AAA family ATPase -
AM341_RS25295 () 91728..92588 - 861 WP_000557452.1 aminoglycoside N-acetyltransferase AAC(3)-IIe -
AM341_RS25300 () 92695..93399 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
AM341_RS25305 () 93453..93893 - 441 Protein_103 CatB-related O-acetyltransferase -
AM341_RS25310 () 94031..94861 - 831 WP_001334766.1 oxacillin-hydrolyzing class D beta-lactamase OXA-1 -
AM341_RS25315 () 94992..95546 - 555 WP_063840321.1 fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5 -
AM341_RS25320 () 95690..96394 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
AM341_RS25325 () 96419..96793 + 375 WP_024193849.1 IS66 family insertion sequence element accessory protein TnpB -
AM341_RS25330 () 96842..97787 + 946 Protein_108 IS66 family transposase -
AM341_RS25340 () 97873..98895 + 1023 WP_000255956.1 IS21-like element IS100 family transposase -
AM341_RS25345 () 98892..99674 + 783 WP_001317493.1 IS21-like element IS100kyp family helper ATPase IstB -
AM341_RS25350 () 99742..100350 + 609 Protein_111 IS66 family transposase -
AM341_RS25355 () 100413..101204 - 792 WP_000977394.1 DUF4198 domain-containing protein -
AM341_RS25360 () 101211..103181 - 1971 WP_001496335.1 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor -
AM341_RS25365 () 103463..103899 + 437 Protein_114 transposase -
AM341_RS25370 () 104424..104696 + 273 WP_001322642.1 adhesin biosynthesis transcription regulatory family protein -
AM341_RS25375 () 105142..105317 + 176 Protein_116 IS3 family transposase -
AM341_RS25380 () 105543..106712 - 1170 WP_001072358.1 hypothetical protein -
AM341_RS25385 () 107079..107267 + 189 WP_001309252.1 hypothetical protein -
AM341_RS25390 () 107388..108128 + 741 WP_001066953.1 tyrosine-type recombinase/integrase -
AM341_RS25395 () 108413..109390 - 978 WP_000361611.1 RepB family plasmid replication initiator protein -
AM341_RS25405 () 110136..110459 + 324 Protein_121 helix-turn-helix domain-containing protein -
AM341_RS26660 () 110461..110565 + 105 Protein_122 AAA family ATPase -
AM341_RS25415 () 110626..111139 + 514 Protein_123 DUF4113 domain-containing protein -
AM341_RS25420 () 111319..112016 - 698 Protein_124 IS1 family transposase -
AM341_RS25435 () 112372..113286 + 915 WP_000949005.1 iron/manganese ABC transporter substrate-binding protein SitA -
AM341_RS25440 () 113286..114113 + 828 WP_000983710.1 iron/manganese ABC transporter ATP-binding protein SitB -
AM341_RS25445 () 114110..114967 + 858 WP_001101723.1 iron/manganese ABC transporter permease subunit SitC -
AM341_RS25450 () 114964..115821 + 858 WP_000968139.1 iron/manganese ABC transporter permease subunit SitD -
AM341_RS25455 () 116055..116312 - 258 Protein_129 Tn3 family transposase -
AM341_RS25460 () 116310..116723 + 414 Protein_130 phosphopyruvate hydratase -
AM341_RS25470 () 117064..117444 + 381 WP_001318207.1 fluoride efflux transporter CrcB -
AM341_RS25475 () 117824..119017 - 1194 WP_000095526.1 MFS transporter -
AM341_RS25480 () 119153..120877 + 1725 WP_044068371.1 aerobactin synthase IucA -
AM341_RS25485 () 120878..121825 + 948 WP_000011908.1 N(6)-hydroxylysine O-acetyltransferase -
AM341_RS25490 () 121825..123567 + 1743 WP_001015721.1 aerobactin synthase IucC -
AM341_RS25495 () 123564..124841 + 1278 WP_000750130.1 NADPH-dependent L-lysine N(6)-monooxygenase -
AM341_RS25500 () 124923..127124 + 2202 WP_000973519.1 ferric aerobactin receptor IutA -
AM341_RS25515 () 127650..128336 + 687 Protein_138 IS1 family transposase -
AM341_RS25525 () 128590..129612 - 1023 WP_000361402.1 helicase UvrD -
AM341_RS25530 () 129597..131162 - 1566 WP_001128474.1 AAA family ATPase -
AM341_RS25535 () 131237..131653 - 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
AM341_RS25540 () 131650..131880 - 231 WP_001261286.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
AM341_RS25550 () 132440..132658 + 219 WP_000813630.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
AM341_RS25555 () 132660..132965 + 306 WP_001159871.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
AM341_RS25560 () 132966..133772 + 807 WP_000016970.1 site-specific integrase -
AM341_RS25565 () 134494..135249 + 756 WP_000852146.1 replication initiation protein RepE -
AM341_RS25570 () 135837..137003 + 1167 WP_000772446.1 plasmid-partitioning protein SopA -
AM341_RS25575 () 137003..137974 + 972 WP_000817031.1 ParB/RepB/Spo0J family plasmid partition protein -
AM341_RS25585 () 138712..139614 + 903 WP_064766247.1 DUF1281 domain-containing protein -
AM341_RS25590 () 139618..139922 + 305 Protein_150 hypothetical protein -
AM341_RS25595 () 139999..140682 + 684 WP_032181561.1 DNA methylase -
AM341_RS25600 () 140683..140904 + 222 WP_001104873.1 hypothetical protein -
AM341_RS25605 () 140918..141352 + 435 WP_001546462.1 DUF1380 family protein -
AM341_RS26460 () 141397..142167 + 771 WP_001006251.1 hypothetical protein -
AM341_RS25620 () 142704..143006 + 303 WP_001666994.1 antirestriction protein -
AM341_RS25625 () 143053..143475 + 423 WP_000271685.1 DUF1380 family protein -
AM341_RS25630 () 143472..143663 + 192 WP_001027495.1 hypothetical protein -
AM341_RS25635 () 143935..144183 - 249 WP_071781657.1 hypothetical protein -
AM341_RS25645 () 144695..144925 + 231 WP_000218642.1 hypothetical protein -
AM341_RS25650 () 144977..146338 + 1362 WP_000199439.1 DUF3560 domain-containing protein -
AM341_RS25655 () 146386..146951 + 566 Protein_161 class I SAM-dependent methyltransferase -
AM341_RS25660 () 146977..147195 + 219 WP_001496291.1 hypothetical protein -
AM341_RS26665 () 147605..147811 + 207 WP_000275856.1 hypothetical protein -
AM341_RS25680 () 147837..148376 + 540 WP_000290840.1 single-stranded DNA-binding protein -
AM341_RS25685 () 148444..148677 + 234 WP_000005990.1 DUF905 family protein -
AM341_RS25690 () 148705..148902 + 198 Protein_166 hypothetical protein -
AM341_RS25695 () 148957..149391 + 435 WP_000845937.1 conjugation system SOS inhibitor PsiB -
AM341_RS25700 () 149388..150107 + 720 WP_001276238.1 plasmid SOS inhibition protein A -
AM341_RS26475 () 150119..150307 - 189 WP_001299721.1 hypothetical protein -
- () 150119..150316 + 198 NuclAT_0 - -
- () 150119..150316 + 198 NuclAT_0 - -
- () 150119..150316 + 198 NuclAT_0 - -
- () 150119..150316 + 198 NuclAT_0 - -
AM341_RS25705 () 150364..151733 + 1370 WP_085947770.1 IS3-like element IS150 family transposase -
- () 151758..151789 + 32 NuclAT_1 - Antitoxin Detail
- () 151758..151789 + 32 NuclAT_1 - Antitoxin Detail
- () 151758..151789 + 32 NuclAT_1 - Antitoxin Detail
- () 151758..151789 + 32 NuclAT_1 - Antitoxin Detail
AM341_RS25710 () 151833..151991 + 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
AM341_RS25725 () 152912..153199 + 288 WP_000107535.1 hypothetical protein -
AM341_RS25730 () 153317..154138 + 822 WP_001234426.1 DUF945 domain-containing protein -
AM341_RS25735 () 154435..155037 - 603 WP_013362798.1 transglycosylase SLT domain-containing protein -
AM341_RS25740 () 155358..155741 + 384 WP_001151524.1 relaxosome protein TraM -
AM341_RS25745 () 155928..156617 + 690 WP_000283385.1 conjugal transfer transcriptional regulator TraJ -
AM341_RS25750 () 156716..156973 + 258 Protein_177 TraY domain-containing protein -
AM341_RS25755 () 157040..158202 + 1163 WP_085947771.1 IS3-like element IS3 family transposase -
AM341_RS25760 () 158205..158372 + 168 WP_100183792.1 TraY domain-containing protein -
AM341_RS25765 () 158405..158770 + 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
AM341_RS25770 () 158785..159096 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
AM341_RS25775 () 159118..159684 + 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
AM341_RS25780 () 159695..160399 + 705 WP_072095570.1 type-F conjugative transfer system secretin TraK -
AM341_RS25785 () 160399..161826 + 1428 WP_000146685.1 conjugal transfer protein TraB -
AM341_RS25790 () 161816..162406 + 591 WP_000002787.1 conjugal transfer protein TraP -
AM341_RS25795 () 162360..162590 + 231 WP_001352845.1 conjugal transfer protein TrbD -
AM341_RS25800 () 162602..162853 + 252 WP_001038342.1 conjugal transfer protein TrbG -
AM341_RS25805 () 162850..163365 + 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
AM341_RS25810 () 163500..163721 + 222 WP_001278689.1 conjugal transfer protein TraR -
AM341_RS25815 () 163881..166508 + 2628 WP_001064245.1 type IV secretion system protein TraC -
AM341_RS25820 () 166505..166891 + 387 WP_000099686.1 type-F conjugative transfer system protein TrbI -
AM341_RS25825 () 166888..167520 + 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
AM341_RS25830 () 167517..168509 + 993 WP_000830180.1 conjugal transfer pilus assembly protein TraU -
AM341_RS25835 () 168518..169156 + 639 WP_021518374.1 type-F conjugative transfer system pilin assembly protein TrbC -
AM341_RS25840 () 169153..170961 + 1809 WP_000821840.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
AM341_RS25845 () 170988..171245 + 258 WP_000864312.1 conjugal transfer protein TrbE -
AM341_RS25850 () 171238..171981 + 744 WP_001030378.1 type-F conjugative transfer system pilin assembly protein TraF -
AM341_RS25855 () 171995..172336 + 342 WP_000556794.1 conjugal transfer protein TrbA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance